RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Yeats4Q9CR11 227 aaKnown RBP7.26□□□□□ -1.25
Lig4-202ENSMUST00000170033 Il1rapl2Q9ERS6 686 aa7.26□□□□□ -1.25
Lig4-202ENSMUST00000170033 Col3a1P08121 1464 aa7.26□□□□□ -1.25
Lig4-202ENSMUST00000170033 MetP16056 1379 aa7.26□□□□□ -1.25
Lig4-202ENSMUST00000170033 1700113H08RikE9Q9Q5 327 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Epb41l2O70318 988 aaKnown RBP7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Tyro3P55144 880 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Cpa2Q504N0 417 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Adora1Q60612 326 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Secisbp2lQ6A098 1086 aaKnown RBP7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Ccdc66Q6NS45 935 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Nme8Q715T0 586 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 RgmbQ7TQ33 436 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Samm50Q8BGH2 469 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 DpydQ8CHR6 1025 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Pcdhb22Q91XZ8 794 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Myh6Q02566 1938 aaKnown RBP7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Ltbp4Q8K4G1 1666 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Sik3Q6P4S6 1311 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Kcnh4A2A5F7 1018 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Cdkn1cP49919 348 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Pold1P52431 1105 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Ccdc34Q3UI66 367 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Ccdc155Q80VJ8 648 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Dis3l2Q8CI75 870 aaKnown RBP7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Mrpl50Q8VDT9 159 aaKnown RBP7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Lman1Q9D0F3 517 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Dock5B2RY04 1868 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Aox4Q3TYQ9 1336 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Znf609Q8BZ47 1413 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Stx1aO35526 288 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Cd22P35329 862 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 CgnP59242 1191 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Prkab2Q6PAM0 271 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 IqcgQ80W32 419 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Ttc14Q9CSP9 761 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Creld2Q9CYA0 350 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Borcs6Q9D6W8 360 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Ube3bQ9ES34 1070 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Cdc45Q9Z1X9 566 aa7.25□□□□□ -1.25
Lig4-202ENSMUST00000170033 Rbbp6P97868 1790 aaKnown RBP7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 Cyp3a57D3YYZ0 503 aa7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 Pald1P70261 859 aa7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 PcQ05920 1178 aa7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 LyarQ08288 388 aaKnown RBP7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 Cnnm3Q32NY4 713 aa7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 Usp48Q3V0C5 1052 aa7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 Gm12185Q5NCB2 835 aa7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 Me3Q8BMF3 604 aa7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 LarsQ8BMJ2 1178 aa7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 Tmem87aQ8BXN9 555 aa7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 Ccdc158Q8CDI6 1109 aa7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 Lrrfip2Q91WK0 415 aa7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 Mageb16Q9CWV4 363 aa7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 Mmel1Q9JLI3 765 aa7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 Tnfrsf10bQ9QZM4 381 aa7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 Klra1P20937 262 aa7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 GscQ02591 256 aa7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 Lins1Q3U1D0 764 aa7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 Cdkl5Q3UTQ8 938 aa7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 Zfp317Q8C0Q5 607 aa7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 AidaQ8C4Q6 305 aa7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 Iffo2Q8R2V2 512 aa7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 Gigyf1Q99MR1 1044 aaKnown RBP7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 Calr3Q9D9Q6 380 aa7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 Appbp2Q9DAX9 585 aa7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 Col4a3bpQ9EQG9 624 aa7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 Utp3Q9JI13 469 aaKnown RBP7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 Sh3bgrQ9WUZ7 214 aa7.24□□□□□ -1.25
Lig4-202ENSMUST00000170033 Cfap99A0A140LIX9 648 aa7.23□□□□□ -1.25
Lig4-202ENSMUST00000170033 Ttll7A4Q9F0 912 aa7.23□□□□□ -1.25
Lig4-202ENSMUST00000170033 Myd88P22366 296 aa7.23□□□□□ -1.25
Lig4-202ENSMUST00000170033 Ppp2r5bQ6PD28 497 aa7.23□□□□□ -1.25
Lig4-202ENSMUST00000170033 Gpatch3Q8BIY1 525 aa7.23□□□□□ -1.25
Lig4-202ENSMUST00000170033 Vps53Q8CCB4 832 aa7.23□□□□□ -1.25
Lig4-202ENSMUST00000170033 Ccdc47Q9D024 483 aaKnown RBP7.23□□□□□ -1.25
Lig4-202ENSMUST00000170033 Ndufa8Q9DCJ5 172 aa7.23□□□□□ -1.25
Lig4-202ENSMUST00000170033 Mad1l1Q9WTX8 717 aaKnown RBP7.23□□□□□ -1.25
Lig4-202ENSMUST00000170033 Duox1A2AQ92 1551 aa7.23□□□□□ -1.25
Lig4-202ENSMUST00000170033 TsksO54887 585 aa7.23□□□□□ -1.25
Lig4-202ENSMUST00000170033 Hspd1P63038 573 aaKnown RBP7.23□□□□□ -1.25
Lig4-202ENSMUST00000170033 Fam117aQ7TNF9 451 aa7.23□□□□□ -1.25
Lig4-202ENSMUST00000170033 Ift57Q8BXG3 429 aa7.23□□□□□ -1.25
Lig4-202ENSMUST00000170033 Pcdhgc5Q91XW9 944 aa7.23□□□□□ -1.25
Lig4-202ENSMUST00000170033 Get4Q9D1H7 327 aa7.23□□□□□ -1.25
Lig4-202ENSMUST00000170033 4930548H24RikQ9D496 437 aa7.23□□□□□ -1.25
Lig4-202ENSMUST00000170033 NagaQ9QWR8 415 aa7.23□□□□□ -1.25
Lig4-202ENSMUST00000170033 Tbc1d8Q9Z1A9 1134 aa7.23□□□□□ -1.25
Lig4-202ENSMUST00000170033 Plch1Q4KWH5 1682 aa7.23□□□□□ -1.25
Lig4-202ENSMUST00000170033 Rgs12Q8CGE9 1381 aa7.23□□□□□ -1.25
Lig4-202ENSMUST00000170033 AfdnQ9QZQ1 1820 aaKnown RBP7.23□□□□□ -1.25
Lig4-202ENSMUST00000170033 Ccdc121E9Q6D3 323 aa7.23□□□□□ -1.25
Lig4-202ENSMUST00000170033 Inf2Q0GNC1 1273 aa7.23□□□□□ -1.25
Lig4-202ENSMUST00000170033 Cdhr2E9Q7P9 1308 aa7.22□□□□□ -1.25
Lig4-202ENSMUST00000170033 Arfgef1G3X9K3 1846 aaKnown RBP7.22□□□□□ -1.25
Lig4-202ENSMUST00000170033 Ccng2O08918 344 aa7.22□□□□□ -1.25
Lig4-202ENSMUST00000170033 Hmx1O70218 332 aa7.22□□□□□ -1.25
Lig4-202ENSMUST00000170033 Plbd2Q3TCN2 594 aa7.22□□□□□ -1.25
Lig4-202ENSMUST00000170033 Ctdnep1Q3TP92 244 aa7.22□□□□□ -1.25
Lig4-202ENSMUST00000170033 Gm28047Q3US59 414 aa7.22□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms