RNA–Protein interactions for RNA: ENSMUST00000156585.7

Ldb1-207, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-207ENSMUST00000156585 Ccdc82Q6PG04 518 aa31.9■■■□□ 2.7
Ldb1-207ENSMUST00000156585 Ccdc47Q9D024 483 aaKnown RBP31.9■■■□□ 2.7
Ldb1-207ENSMUST00000156585 Pde6aP27664 859 aa31.9■■■□□ 2.7
Ldb1-207ENSMUST00000156585 Cnnm2Q3TWN3 875 aa31.9■■■□□ 2.7
Ldb1-207ENSMUST00000156585 Prdm1Q60636 856 aa31.9■■■□□ 2.7
Ldb1-207ENSMUST00000156585 Rcan3Q9JKK0 239 aa31.9■■■□□ 2.7
Ldb1-207ENSMUST00000156585 Cfap99A0A140LIX9 648 aa31.89■■■□□ 2.7
Ldb1-207ENSMUST00000156585 Ankrd63A2ARS0 390 aa31.89■■■□□ 2.7
Ldb1-207ENSMUST00000156585 Ccdc174Q3U155 467 aa31.89■■■□□ 2.7
Ldb1-207ENSMUST00000156585 Cyp24a1Q64441 514 aa31.89■■■□□ 2.7
Ldb1-207ENSMUST00000156585 Krt40Q6IFX3 439 aa31.89■■■□□ 2.7
Ldb1-207ENSMUST00000156585 Gm7347D3YYI9 267 aa31.88■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Speer4aF8VPX6 267 aa31.88■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Slc44a1Q6X893 653 aa31.88■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Amhr2Q8K592 568 aa31.88■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Pold4Q9CWP8 107 aa31.88■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Adarb2Q9JI20 745 aa31.88■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Tuft1O08970 390 aa31.88■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Heg1E9Q7X6 1337 aa31.87■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Myh2G3UW82 1942 aa31.87■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Gm20425E9Q035 978 aaKnown RBP31.87■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Mcm3P25206 812 aaKnown RBP31.87■■■□□ 2.69
Ldb1-207ENSMUST00000156585 SrprbP47758 269 aa31.87■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Arid3aQ62431 601 aa31.87■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Cxcl11Q9JHH5 100 aa31.87■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Myh4Q5SX39 1939 aa31.87■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Lnx1O70263 728 aa31.87■■■□□ 2.69
Ldb1-207ENSMUST00000156585 E4f1Q8CCE9 783 aa31.87■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Cdc45Q9Z1X9 566 aa31.87■■■□□ 2.69
Ldb1-207ENSMUST00000156585 A0A1W2P7S8 802 aa31.86■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Cyp26a1O55127 497 aa31.86■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Siah1aP61092 282 aa31.86■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Cdc5lQ6A068 802 aaKnown RBP31.86■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Rbm15bQ6PHZ5 887 aaKnown RBP31.86■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Map3k15A2AQW0 1331 aa31.86■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Metap2O08663 478 aaKnown RBP31.85■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Me1P06801 572 aa31.85■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Celf1P28659 486 aaKnown RBP31.85■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Znf609Q8BZ47 1413 aa31.85■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Dennd3A2RT67 1274 aa31.85■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Cd3dP04235 173 aa31.85■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Stag1Q9D3E6 1258 aa31.85■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Ppp1r21Q3TDD9 780 aa31.84■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Usp28Q5I043 1051 aa31.84■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Bicd2Q921C5 820 aa31.84■■■□□ 2.69
Ldb1-207ENSMUST00000156585 1700113H08RikE9Q9Q5 327 aa31.83■■■□□ 2.69
Ldb1-207ENSMUST00000156585 VmacQ8BP01 174 aa31.83■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Phrf1A6H619 1682 aa31.83■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Ccdc112A0AUP1 442 aa31.83■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Cdkl5Q3UTQ8 938 aa31.83■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Mknk2Q8CDB0 459 aa31.83■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Bola3Q8CEI1 110 aa31.83■■■□□ 2.69
Ldb1-207ENSMUST00000156585 DymQ8CHY3 669 aa31.83■■■□□ 2.69
Ldb1-207ENSMUST00000156585 Rcan1Q9JHG6 198 aa31.83■■■□□ 2.69
Ldb1-207ENSMUST00000156585 GalcP54818 684 aa31.82■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Lins1Q3U1D0 764 aa31.82■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Rbm26Q6NZN0 1012 aaKnown RBP31.82■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Srek1Q8BZX4 494 aaKnown RBP31.82■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Cplx2P84086 134 aa31.82■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Paf1Q8K2T8 535 aa31.82■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Chd1lQ9CXF7 900 aa31.82■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Zscan25B2RX31 543 aa31.81■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Aknad1E9Q8N6 675 aa31.81■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Rnf41Q8BH75 317 aa31.81■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Olfml1Q8BSH2 233 aa31.81■■■□□ 2.68
Ldb1-207ENSMUST00000156585 SdsQ8VBT2 327 aa31.81■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Sh3tc1G3X9F6 1346 aa31.81■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Cfap58B2RW38 873 aa31.8■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Oas2E9Q9A9 742 aa31.8■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Rgs12Q8CGE9 1381 aa31.8■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Cfap73J3QPZ5 306 aa31.8■■■□□ 2.68
Ldb1-207ENSMUST00000156585 TnmdQ9EP64 317 aa31.8■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Arfgef1G3X9K3 1846 aaKnown RBP31.79■■■□□ 2.68
Ldb1-207ENSMUST00000156585 TrhQ62361 256 aa31.79■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Cfap69Q8BH53 942 aa31.79■■■□□ 2.68
Ldb1-207ENSMUST00000156585 HlfQ8BW74 295 aa31.79■■■□□ 2.68
Ldb1-207ENSMUST00000156585 CpdO89001 1377 aa31.78■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Ccdc173A0JLY1 547 aa31.78■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Mapkapk5O54992 473 aa31.78■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Q3TYL0 343 aa31.78■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Ankrd13dQ6PD24 605 aa31.78■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Hps6Q8BLY7 805 aa31.78■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Fez1Q8K0X8 392 aa31.78■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Dydc2Q9D3X8 139 aa31.78■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Erich6bQ9D4S6 220 aa31.78■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Kif3aP28741 701 aa31.77■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Col4a3bpQ9EQG9 624 aa31.77■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Add3Q9QYB5 706 aaKnown RBP31.77■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Rbbp6P97868 1790 aaKnown RBP31.77■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Naaladl2A0A0N4SUJ3 795 aa31.76■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Klhl34A2AI76 644 aa31.76■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Pde11aP0C1Q2 933 aa31.76■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Tmem109Q3UBX0 243 aa31.76■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Ttc12Q8BW49 704 aa31.76■■■□□ 2.68
Ldb1-207ENSMUST00000156585 Gm5592Q3V0A6 857 aa31.76■■■□□ 2.67
Ldb1-207ENSMUST00000156585 Ckap2Q3V1H1 664 aa31.76■■■□□ 2.67
Ldb1-207ENSMUST00000156585 Myl10Q62082 202 aa31.76■■■□□ 2.67
Ldb1-207ENSMUST00000156585 Slc14a2Q8R4T9 930 aa31.76■■■□□ 2.67
Ldb1-207ENSMUST00000156585 Olfr118Q7TRJ6 321 aa31.75■■■□□ 2.67
Ldb1-207ENSMUST00000156585 Cdca8Q8BHX3 289 aa31.75■■■□□ 2.67
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms