RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Ranbp1P34022 203 aaKnown RBP13.17□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Gdap1l1Q8VE33 370 aa13.17□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Nop2Q922K7 793 aaKnown RBP13.17□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Erc1Q99MI1 1120 aa13.17□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 A0A0U1RNP2 1173 aa13.16□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Cdc27A2A6Q5 825 aa13.16□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Rfc1P35601 1131 aa13.16□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Psmb7P70195 277 aa13.16□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Ankrd40Q5SUE8 363 aa13.16□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Ncoa7Q6DFV7 943 aa13.16□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Atp1a2Q6PIE5 1020 aa13.16□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Nek9Q8K1R7 984 aa13.16□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Zranb2Q9R020 330 aaKnown RBP13.16□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 PtprvP70289 1705 aa13.16□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Ktn1Q61595 1327 aaKnown RBP13.16□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Tbc1d2B1AVH7 922 aa13.16□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 GmnnO88513 206 aa13.16□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Eif5P59325 429 aaKnown RBP13.16□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Igflr1Q3U4N7 345 aa13.16□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Prdm1Q60636 856 aa13.16□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Necab1Q8BG18 352 aa13.16□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Shisa4Q8CA71 197 aa13.16□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Tada3Q8R0L9 432 aa13.16□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Nup153E9Q3G8 1462 aaKnown RBP13.16□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Pde4bB1AWC9 736 aa13.15□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Prpf4bQ61136 1007 aaKnown RBP13.15□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Tpm4Q6IRU2 248 aa13.15□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Cnksr2Q80YA9 1032 aa13.15□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 AidaQ8C4Q6 305 aa13.15□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Zswim4Q8C7B8 1101 aa13.15□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Acsbg1Q99PU5 721 aa13.15□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Tbc1d7Q9D0K0 293 aa13.15□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Naa16Q9DBB4 864 aa13.15□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Ptpn23Q6PB44 1692 aa13.15□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 InsrrQ9WTL4 1300 aa13.15□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Ovgp1Q62010 721 aa13.15□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Tmem59lQ7TNI2 337 aa13.15□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Cep120Q7TSG1 988 aa13.15□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Tmem119Q8R138 280 aa13.15□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Pdzd9Q9D9M4 266 aa13.15□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 NagaQ9QWR8 415 aa13.15□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Fam50bQ9WTJ8 334 aa13.15□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Rreb1Q3UH06 1700 aaKnown RBP13.15□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Casz1Q9CWL2 1761 aa13.15□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Bag1Q60739 355 aa13.15□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Recql4Q75NR7 1216 aaKnown RBP13.15□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Evc2Q8K1G2 1220 aa13.15□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Kri1Q8VDQ9 704 aaKnown RBP13.15□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 BaatQ91X34 420 aa13.15□□□□□ -0.3
Prpf40b-208ENSMUST00000136980 Usp42B2RQC2 1324 aaKnown RBP13.14□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Krt39Q6IFX4 482 aa13.14□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Ripor2Q80U16 1078 aa13.14□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Ppp2r2cQ8BG02 447 aa13.14□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Prc1Q99K43 603 aaKnown RBP13.14□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Sil1Q9EPK6 465 aa13.14□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 MypnQ5DTJ9 1315 aa13.14□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Abcc12Q80WJ6 1366 aa13.14□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Gm43638A0A0J9YU36 694 aa13.14□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Epha2Q03145 977 aa13.14□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Ddx58Q6Q899 926 aa13.14□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Smc1aQ9CU62 1233 aaKnown RBP13.14□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Znf653Q6YND2 615 aa13.13□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Klhl30Q8C3F7 581 aa13.13□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Gm10134F6ZQC6 126 aa13.13□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Dnm1P39053 867 aa13.13□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Cplx1P63040 134 aa13.13□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Llgl2Q3TJ91 1027 aa13.13□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Myl10Q62082 202 aa13.13□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Fkbp5Q64378 456 aa13.13□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Tmem87bQ8BKU8 555 aa13.13□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Atad2Q8CDM1 1040 aa13.13□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Atp1a4Q9WV27 1032 aa13.13□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Brwd3A2AHJ4 1799 aa13.13□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Sult6b1P0CC03 303 aa13.13□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 RargP18911 458 aaKnown RBP13.13□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Lamb3Q61087 1168 aa13.13□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Cep63Q3UPP8 700 aa13.12□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Prl2c1Q5SVL9 228 aa13.12□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 DymQ8CHY3 669 aa13.12□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Ccdc121E9Q6D3 323 aa13.12□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Grin1P35438 938 aa13.12□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Atp6v1aP50516 617 aaKnown RBP13.12□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Ctdspl2Q8BG15 465 aa13.12□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Chmp7Q8R1T1 451 aa13.12□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Rgs22G3UYX5 1258 aa13.11□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 MyclP10166 368 aa13.11□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Kcnd1Q03719 651 aa13.11□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Acbd5Q5XG73 508 aa13.11□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Spata16Q8C636 571 aa13.11□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Tubgcp2Q921G8 905 aa13.11□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 DonsonQ9QXP4 560 aa13.11□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 BcanQ61361 883 aa13.11□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Npdc1Q64322 332 aa13.11□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Pcdhb14Q6PB90 796 aa13.11□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Adck5Q80V03 582 aa13.11□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Prkag3Q8BGM7 489 aa13.11□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Cep55Q8BT07 462 aa13.11□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Ccdc12Q8R344 166 aaKnown RBP13.11□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Mis12Q9CY25 206 aa13.11□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 SarnpQ9D1J3 210 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 65.5 ms