RNA–Protein interactions for RNA: ENSMUST00000108661.7

Chd3-202, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Chd3, Length 7,261 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-202ENSMUST00000108661 Krt20Q9D312 431 aa12.86□□□□□ -0.35
Chd3-202ENSMUST00000108661 Ccnt1Q9QWV9 724 aaKnown RBP12.86□□□□□ -0.35
Chd3-202ENSMUST00000108661 Rad50P70388 1312 aa12.86□□□□□ -0.35
Chd3-202ENSMUST00000108661 Otud7bB2RUR8 840 aa12.85□□□□□ -0.35
Chd3-202ENSMUST00000108661 Rrp1P56183 494 aaKnown RBP12.85□□□□□ -0.35
Chd3-202ENSMUST00000108661 Nek11Q8C0Q4 628 aa12.85□□□□□ -0.35
Chd3-202ENSMUST00000108661 Mtmr3Q8K296 1196 aa12.85□□□□□ -0.35
Chd3-202ENSMUST00000108661 Tceanc2Q8R2M0 207 aa12.85□□□□□ -0.35
Chd3-202ENSMUST00000108661 Trpc3Q9QZC1 836 aa12.85□□□□□ -0.35
Chd3-202ENSMUST00000108661 Jakmip2D3YXK0 820 aa12.85□□□□□ -0.35
Chd3-202ENSMUST00000108661 Ireb2Q811J3 963 aaKnown RBP12.85□□□□□ -0.35
Chd3-202ENSMUST00000108661 FanclQ9CR14 375 aa12.85□□□□□ -0.35
Chd3-202ENSMUST00000108661 Abcc4E9Q236 1325 aa12.85□□□□□ -0.35
Chd3-202ENSMUST00000108661 Anapc15-psA0A140T8L6 141 aa12.85□□□□□ -0.35
Chd3-202ENSMUST00000108661 Cpb1B2RS76 415 aa12.85□□□□□ -0.35
Chd3-202ENSMUST00000108661 Ccdc174Q3U155 467 aa12.85□□□□□ -0.35
Chd3-202ENSMUST00000108661 Kif11Q6P9P6 1052 aa12.85□□□□□ -0.35
Chd3-202ENSMUST00000108661 Arhgef10lA2AWP8 1280 aa12.85□□□□□ -0.35
Chd3-202ENSMUST00000108661 Gpcpd1Q8C0L9 675 aa12.85□□□□□ -0.35
Chd3-202ENSMUST00000108661 Stx6Q9JKK1 255 aa12.85□□□□□ -0.35
Chd3-202ENSMUST00000108661 Tnni3P48787 211 aa12.85□□□□□ -0.35
Chd3-202ENSMUST00000108661 Ccdc105Q9D4K7 499 aa12.85□□□□□ -0.35
Chd3-202ENSMUST00000108661 Magea6O89010 325 aa12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 Wdr70Q3TWF6 657 aa12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 MaeaQ4VC33 396 aa12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 Magea3Q6T340 320 aa12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 Sbno1Q689Z5 1390 aa12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 SphkapQ6NSW3 1687 aa12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 Smc1aQ9CU62 1233 aaKnown RBP12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 Tacc2Q9JJG0 1149 aa12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 Kifap3P70188 793 aa12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 Clcn1Q64347 994 aa12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 RgmbQ7TQ33 436 aa12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 Zscan25B2RX31 543 aa12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 Zbtb38Q3LR78 1197 aa12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 Ubac1Q8VDI7 409 aa12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 Bnip3lQ9Z2F7 218 aa12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 Uhrf1bp1lA2RSJ4 1457 aa12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 Magea1O89006 320 aa12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 Magea5O89009 320 aa12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 LdhbP16125 334 aaKnown RBP12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 Rrp9Q91WM3 475 aaKnown RBP12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 Magea2Q9R2A2 320 aa12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 Lmbrd2Q8C561 694 aa12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 Stn1Q8K2X3 378 aa12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 CactinQ9CS00 772 aaKnown RBP12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 Capn12Q9ER56 720 aa12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 Arhgef40Q3UPH7 1517 aa12.84□□□□□ -0.35
Chd3-202ENSMUST00000108661 Ccdc112A0AUP1 442 aa12.83□□□□□ -0.35
Chd3-202ENSMUST00000108661 Mdm2P23804 489 aa12.83□□□□□ -0.35
Chd3-202ENSMUST00000108661 Nbr1P97432 988 aa12.83□□□□□ -0.35
Chd3-202ENSMUST00000108661 Ddx39aQ8VDW0 427 aaKnown RBP12.83□□□□□ -0.35
Chd3-202ENSMUST00000108661 Ttll7A4Q9F0 912 aa12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 Cyp4f39Q8BGU0 532 aa12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 Ciapin1Q8WTY4 309 aa12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 Wdr63B2RY71 923 aa12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 Caprin2Q05A80 1031 aaKnown RBP12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 Tmtc2Q56A06 836 aa12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 Nlrp9aQ66X03 949 aa12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 StambpQ9CQ26 424 aa12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 Cap2Q9CYT6 476 aa12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 Fsip1Q9D3V5 435 aa12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 Ncoa1P70365 1447 aa12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 Prss51A0A286YDY8 319 aa12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 Oas2E9Q9A9 742 aa12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 Dpp9Q8BVG4 862 aa12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 Ankrd1Q9CR42 319 aa12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 Drc3Q9D5E4 523 aa12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 Flot1O08917 428 aa12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 Dcaf15Q6PFH3 600 aa12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 Bbs5Q9CZQ9 341 aa12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 Znf335A2A5K6 1337 aa12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 Gcc2Q8CHG3 1679 aa12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 PtprtQ99M80 1454 aa12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 Oxr1Q4KMM3 866 aa12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 Abcf1Q6P542 837 aaKnown RBP12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 Crybg3Q80W49 1005 aa12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 Mettl5Q8K1A0 209 aa12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 Rfc4Q99J62 364 aa12.83□□□□□ -0.36
Chd3-202ENSMUST00000108661 Arhgef11Q68FM7 1552 aa12.82□□□□□ -0.36
Chd3-202ENSMUST00000108661 FancaQ9JL70 1439 aa12.82□□□□□ -0.36
Chd3-202ENSMUST00000108661 Syde2E9PUP1 1314 aa12.82□□□□□ -0.36
Chd3-202ENSMUST00000108661 Gm11985A0A1B0GS61 206 aa12.82□□□□□ -0.36
Chd3-202ENSMUST00000108661 Ncoa4Q5U4H9 625 aa12.82□□□□□ -0.36
Chd3-202ENSMUST00000108661 Uso1Q9Z1Z0 959 aaKnown RBP12.82□□□□□ -0.36
Chd3-202ENSMUST00000108661 Cfap70D3YVL2 1141 aa12.82□□□□□ -0.36
Chd3-202ENSMUST00000108661 Ddx23D3Z0M9 819 aaKnown RBP12.82□□□□□ -0.36
Chd3-202ENSMUST00000108661 Apol10bG3X9K7 334 aa12.82□□□□□ -0.36
Chd3-202ENSMUST00000108661 Igbp1bQ9QZ29 343 aa12.82□□□□□ -0.36
Chd3-202ENSMUST00000108661 Ak9G3UYQ4 1894 aa12.82□□□□□ -0.36
Chd3-202ENSMUST00000108661 Trim27Q62158 513 aa12.82□□□□□ -0.36
Chd3-202ENSMUST00000108661 Otud6bQ8K2H2 294 aa12.82□□□□□ -0.36
Chd3-202ENSMUST00000108661 Dnaaf4Q8R368 420 aa12.82□□□□□ -0.36
Chd3-202ENSMUST00000108661 MypnQ5DTJ9 1315 aa12.82□□□□□ -0.36
Chd3-202ENSMUST00000108661 Syce3B5KM66 88 aa12.82□□□□□ -0.36
Chd3-202ENSMUST00000108661 Stx1aO35526 288 aa12.82□□□□□ -0.36
Chd3-202ENSMUST00000108661 Cavin1O54724 392 aa12.82□□□□□ -0.36
Chd3-202ENSMUST00000108661 Cavin2Q63918 418 aaKnown RBP12.82□□□□□ -0.36
Chd3-202ENSMUST00000108661 Skor1Q8BX46 964 aa12.82□□□□□ -0.36
Chd3-202ENSMUST00000108661 Fam186bD3Z420 943 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 56.2 ms