RNA–Protein interactions for RNA: ENSMUST00000107934.1

Shank1-201, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-201ENSMUST00000107934 Tsr2Q8C8T8 191 aa17.66■□□□□ 0.42
Shank1-201ENSMUST00000107934 Tbc1d8Q9Z1A9 1134 aa17.66■□□□□ 0.42
Shank1-201ENSMUST00000107934 Zkscan16A2ALW2 728 aa17.66■□□□□ 0.42
Shank1-201ENSMUST00000107934 TrdnE9Q9K5 693 aa17.66■□□□□ 0.42
Shank1-201ENSMUST00000107934 Ccdc94Q9D6J3 314 aa17.66■□□□□ 0.42
Shank1-201ENSMUST00000107934 Nckap5lQ6GQX2 1323 aa17.66■□□□□ 0.42
Shank1-201ENSMUST00000107934 Gm29094F6Q785 221 aa17.66■□□□□ 0.42
Shank1-201ENSMUST00000107934 Gse1Q3U3C9 1213 aa17.66■□□□□ 0.42
Shank1-201ENSMUST00000107934 Krt20Q9D312 431 aa17.66■□□□□ 0.42
Shank1-201ENSMUST00000107934 TnnQ80Z71 1560 aa17.65■□□□□ 0.42
Shank1-201ENSMUST00000107934 MthfslL7N466 203 aa17.65■□□□□ 0.42
Shank1-201ENSMUST00000107934 Ddx27Q921N6 760 aaKnown RBP17.65■□□□□ 0.42
Shank1-201ENSMUST00000107934 Ddx17Q501J6 650 aaKnown RBP17.65■□□□□ 0.42
Shank1-201ENSMUST00000107934 Ifih1Q8R5F7 1025 aa17.65■□□□□ 0.42
Shank1-201ENSMUST00000107934 Azi2Q9QYP6 405 aa17.65■□□□□ 0.42
Shank1-201ENSMUST00000107934 Usp11Q99K46 921 aa17.65■□□□□ 0.42
Shank1-201ENSMUST00000107934 Cpsf1Q9EPU4 1441 aaKnown RBP17.65■□□□□ 0.42
Shank1-201ENSMUST00000107934 Myl10Q62082 202 aa17.65■□□□□ 0.42
Shank1-201ENSMUST00000107934 Kif17Q99PW8 1038 aa17.65■□□□□ 0.42
Shank1-201ENSMUST00000107934 Col17a1Q07563 1470 aa17.65■□□□□ 0.42
Shank1-201ENSMUST00000107934 Gbp8Q2V6D6 525 aa17.65■□□□□ 0.42
Shank1-201ENSMUST00000107934 Sdccag8Q80UF4 717 aa17.65■□□□□ 0.42
Shank1-201ENSMUST00000107934 Lrrc36Q3V0M2 755 aa17.64■□□□□ 0.41
Shank1-201ENSMUST00000107934 Gramd4Q8CB44 633 aa17.64■□□□□ 0.41
Shank1-201ENSMUST00000107934 Pcdhb22Q91XZ8 794 aa17.64■□□□□ 0.41
Shank1-201ENSMUST00000107934 Mpp4Q6P7F1 635 aa17.64■□□□□ 0.41
Shank1-201ENSMUST00000107934 Plcd1Q8R3B1 756 aa17.64■□□□□ 0.41
Shank1-201ENSMUST00000107934 Usp33Q8R5K2 909 aa17.64■□□□□ 0.41
Shank1-201ENSMUST00000107934 Psrc1Q9D0P7 329 aa17.64■□□□□ 0.41
Shank1-201ENSMUST00000107934 Calml3Q9D6P8 149 aa17.64■□□□□ 0.41
Shank1-201ENSMUST00000107934 Abcc4E9Q236 1325 aa17.64■□□□□ 0.41
Shank1-201ENSMUST00000107934 Samd15F6XZJ7 620 aa17.64■□□□□ 0.41
Shank1-201ENSMUST00000107934 Pcdhb2Q91Y00 799 aa17.64■□□□□ 0.41
Shank1-201ENSMUST00000107934 Ubxn1Q922Y1 297 aa17.64■□□□□ 0.41
Shank1-201ENSMUST00000107934 Ndufa8Q9DCJ5 172 aa17.64■□□□□ 0.41
Shank1-201ENSMUST00000107934 Erich3F6QRE9 1637 aa17.64■□□□□ 0.41
Shank1-201ENSMUST00000107934 Gm44503E9PYU5 387 aa17.64■□□□□ 0.41
Shank1-201ENSMUST00000107934 Efcab6Q6P1E8 1516 aa17.64■□□□□ 0.41
Shank1-201ENSMUST00000107934 Aox4Q3TYQ9 1336 aa17.64■□□□□ 0.41
Shank1-201ENSMUST00000107934 Ccdc25Q78PG9 208 aa17.63■□□□□ 0.41
Shank1-201ENSMUST00000107934 Dhx38Q80X98 1228 aa17.63■□□□□ 0.41
Shank1-201ENSMUST00000107934 Ublcp1Q8BGR9 318 aa17.63■□□□□ 0.41
Shank1-201ENSMUST00000107934 Ptch1Q61115 1434 aa17.63■□□□□ 0.41
Shank1-201ENSMUST00000107934 Peg3Q3URU2 1571 aa17.63■□□□□ 0.41
Shank1-201ENSMUST00000107934 Ets1P27577 440 aa17.63■□□□□ 0.41
Shank1-201ENSMUST00000107934 Eef2P58252 858 aaKnown RBP17.63■□□□□ 0.41
Shank1-201ENSMUST00000107934 Ccpg1Q640L3 753 aa17.63■□□□□ 0.41
Shank1-201ENSMUST00000107934 SdsQ8VBT2 327 aa17.63■□□□□ 0.41
Shank1-201ENSMUST00000107934 Ddx23D3Z0M9 819 aaKnown RBP17.63■□□□□ 0.41
Shank1-201ENSMUST00000107934 Tom1l2Q5SRX1 507 aa17.63■□□□□ 0.41
Shank1-201ENSMUST00000107934 Fam204aQ8C6C7 236 aa17.63■□□□□ 0.41
Shank1-201ENSMUST00000107934 Mettl5Q8K1A0 209 aa17.63■□□□□ 0.41
Shank1-201ENSMUST00000107934 Tex19.1Q99MV2 351 aa17.63■□□□□ 0.41
Shank1-201ENSMUST00000107934 Fsip1Q9D3V5 435 aa17.63■□□□□ 0.41
Shank1-201ENSMUST00000107934 Sept7O55131 436 aa17.63■□□□□ 0.41
Shank1-201ENSMUST00000107934 AW822073A0A0N4SUK1 652 aa17.62■□□□□ 0.41
Shank1-201ENSMUST00000107934 Rpl13P47963 211 aaKnown RBP17.62■□□□□ 0.41
Shank1-201ENSMUST00000107934 Lin9Q8C735 542 aa17.62■□□□□ 0.41
Shank1-201ENSMUST00000107934 Sept14Q9DA97 430 aa17.62■□□□□ 0.41
Shank1-201ENSMUST00000107934 Ccnt1Q9QWV9 724 aaKnown RBP17.62■□□□□ 0.41
Shank1-201ENSMUST00000107934 Speer4f2E9Q366 295 aa17.62■□□□□ 0.41
Shank1-201ENSMUST00000107934 Tnnc1P19123 161 aa17.62■□□□□ 0.41
Shank1-201ENSMUST00000107934 Top1Q04750 767 aaKnown RBP17.62■□□□□ 0.41
Shank1-201ENSMUST00000107934 VrtnQ3SYK4 740 aa17.62■□□□□ 0.41
Shank1-201ENSMUST00000107934 Kiaa1328Q6NZK5 612 aa17.62■□□□□ 0.41
Shank1-201ENSMUST00000107934 Tmem87aQ8BXN9 555 aa17.62■□□□□ 0.41
Shank1-201ENSMUST00000107934 Acot11Q8VHQ9 594 aa17.62■□□□□ 0.41
Shank1-201ENSMUST00000107934 Appbp2Q9DAX9 585 aa17.62■□□□□ 0.41
Shank1-201ENSMUST00000107934 Gadd45bP22339 160 aa17.62■□□□□ 0.41
Shank1-201ENSMUST00000107934 Tdo2P48776 406 aa17.62■□□□□ 0.41
Shank1-201ENSMUST00000107934 Pm20d1Q8C165 503 aa17.62■□□□□ 0.41
Shank1-201ENSMUST00000107934 Nphp4P59240 1425 aa17.61■□□□□ 0.41
Shank1-201ENSMUST00000107934 Pprc1Q6NZN1 1644 aa17.61■□□□□ 0.41
Shank1-201ENSMUST00000107934 Fmn2Q9JL04 1578 aa17.61■□□□□ 0.41
Shank1-201ENSMUST00000107934 Prdm11A2AGX3 565 aa17.61■□□□□ 0.41
Shank1-201ENSMUST00000107934 Gm1993A6X8I0 212 aa17.61■□□□□ 0.41
Shank1-201ENSMUST00000107934 SlxD3Z347 212 aa17.61■□□□□ 0.41
Shank1-201ENSMUST00000107934 Tmtc2Q56A06 836 aa17.61■□□□□ 0.41
Shank1-201ENSMUST00000107934 Kif1bpQ6ZPU9 617 aa17.61■□□□□ 0.41
Shank1-201ENSMUST00000107934 Gm5934D3Z4U6 212 aa17.61■□□□□ 0.41
Shank1-201ENSMUST00000107934 Prl7a2O54831 253 aa17.61■□□□□ 0.41
Shank1-201ENSMUST00000107934 Tab2Q99K90 693 aa17.61■□□□□ 0.41
Shank1-201ENSMUST00000107934 Gbp1Q01514 589 aa17.61■□□□□ 0.41
Shank1-201ENSMUST00000107934 Gtpbp6Q3U6U5 514 aa17.61■□□□□ 0.41
Shank1-201ENSMUST00000107934 Rad17Q6NXW6 688 aa17.61■□□□□ 0.41
Shank1-201ENSMUST00000107934 Taf12Q8VE65 161 aa17.61■□□□□ 0.41
Shank1-201ENSMUST00000107934 Cfap65Q3V0B4 1847 aa17.61■□□□□ 0.41
Shank1-201ENSMUST00000107934 Pus7B7ZNL8 666 aaKnown RBP17.61■□□□□ 0.41
Shank1-201ENSMUST00000107934 Card10P58660 1021 aa17.61■□□□□ 0.41
Shank1-201ENSMUST00000107934 1700029H14RikE9PY36 240 aa17.6■□□□□ 0.41
Shank1-201ENSMUST00000107934 Gm28047Q3US59 414 aa17.6■□□□□ 0.41
Shank1-201ENSMUST00000107934 Adam1aQ60813 791 aa17.6■□□□□ 0.41
Shank1-201ENSMUST00000107934 Ssx2ipQ8VC66 615 aa17.6■□□□□ 0.41
Shank1-201ENSMUST00000107934 Ppfibp2O35711 882 aa17.6■□□□□ 0.41
Shank1-201ENSMUST00000107934 Stmn4P63042 189 aa17.6■□□□□ 0.41
Shank1-201ENSMUST00000107934 Stox1B2RQL2 990 aa17.6■□□□□ 0.41
Shank1-201ENSMUST00000107934 Kcna6Q61923 529 aa17.6■□□□□ 0.41
Shank1-201ENSMUST00000107934 Traf1P39428 409 aa17.6■□□□□ 0.41
Shank1-201ENSMUST00000107934 Arl1P61211 181 aa17.6■□□□□ 0.41
Shank1-201ENSMUST00000107934 Zkscan4Q5SZT6 480 aa17.6■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms