RNA–Protein interactions for RNA: ENSMUST00000096386.12

Rnf41-201, Transcript of E3 ubiquitin-protein ligase NRDP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf41, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41-201ENSMUST00000096386 Bsdc1Q80Y55 427 aa12.32□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Fam163bQ8BUM6 167 aa12.32□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Ppp1r15aP17564 657 aa12.32□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Sco1Q5SUC9 284 aa12.32□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Dpf2Q61103 391 aaKnown RBP12.32□□□□□ -0.44
Rnf41-201ENSMUST00000096386 EsrrbQ61539 433 aa12.32□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Ifit1Q64282 463 aa12.32□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Btbd11Q6GQW0 1109 aa12.32□□□□□ -0.44
Rnf41-201ENSMUST00000096386 BcrQ6PAJ1 1270 aa12.32□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Rps6kb1Q8BSK8 525 aa12.32□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Scn4aQ9ER60 1841 aa12.32□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Spout1Q3UHX9 385 aaKnown RBP12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 EspnlQ3UYR4 1005 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Camsap3Q80VC9 1252 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Tcp11l1Q8BTG3 509 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Hgh1Q8C3I8 393 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Atf7Q8R0S1 413 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Tubb6Q922F4 447 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Ccer1Q9CQL2 403 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Nek3Q9R0A5 511 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Stxbp4Q9WV89 557 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Stk36Q69ZM6 1316 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 PrphP15331 475 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Stat1P42225 749 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Gngt1Q61012 74 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Tubb2aQ7TMM9 445 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Phf8Q80TJ7 1023 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Polr3dQ91WD1 398 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Rrp1bQ91YK2 724 aaKnown RBP12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Tubb2bQ9CWF2 445 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Clip2Q9Z0H8 1047 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Spef2Q8C9J3 1734 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Dnajc25A2ALW5 357 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Cacna2d1O08532 1103 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 RcvrnP34057 202 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Mnat1P51949 309 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Cep112Q5PR68 954 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Ddx11Q6AXC6 880 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Snd1Q78PY7 910 aaKnown RBP12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 ToporslQ9D2F8 683 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Mei1Q9D4I2 1268 aa12.31□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Bbof1Q3V079 533 aa12.3□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Znf697Q569E7 569 aa12.3□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Ddx46Q569Z5 1032 aaKnown RBP12.3□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Adgrb1Q3UHD1 1582 aa12.3□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Grik3B1AS29 919 aa12.3□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Cct4P80315 539 aaKnown RBP12.3□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Tax1bp1Q3UKC1 814 aaKnown RBP12.3□□□□□ -0.44
Rnf41-201ENSMUST00000096386 AopepQ8BXQ6 817 aa12.3□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Filip1Q9CS72 1211 aa12.3□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Scnn1bQ9WU38 638 aa12.3□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Tnip1Q9WUU8 647 aa12.3□□□□□ -0.44
Rnf41-201ENSMUST00000096386 E9QMW4 1145 aa12.29□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Adcy3Q8VHH7 1145 aa12.29□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Tceal9Q9DD24 104 aa12.29□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Rims2Q9EQZ7 1530 aa12.29□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Trim30cD3YVI9 513 aa12.29□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Pola2P33611 600 aa12.29□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Stim1P70302 685 aa12.29□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Tbx2Q60707 711 aa12.29□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Lamb3Q61087 1168 aa12.29□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Cep120Q7TSG1 988 aa12.29□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Ubxn10Q8BG34 277 aa12.29□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Traf3ip3Q8C0G2 513 aa12.29□□□□□ -0.44
Rnf41-201ENSMUST00000096386 AppP12023 770 aa12.28□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Surf6P70279 355 aaKnown RBP12.28□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Mum1l1Q4VA55 681 aa12.28□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Armc9Q9D2I5 817 aa12.28□□□□□ -0.44
Rnf41-201ENSMUST00000096386 FosbP13346 338 aa12.28□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Impdh2P24547 514 aa12.28□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Mybpc2Q5XKE0 1136 aa12.28□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Brsk2Q69Z98 735 aa12.28□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Ppp1r10Q80W00 888 aaKnown RBP12.28□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Tmc2Q8R4P4 888 aa12.28□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Kdm7aQ3UWM4 940 aa12.28□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Tsr1Q5SWD9 803 aa12.28□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Lrsam1Q80ZI6 727 aa12.28□□□□□ -0.44
Rnf41-201ENSMUST00000096386 MyripQ8K3I4 856 aa12.28□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Uhrf1bp1lA2RSJ4 1457 aa12.27□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Ugt1a5B2RT14 529 aa12.27□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Limch1Q3UH68 1057 aa12.27□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Lmod1Q8BVA4 595 aa12.27□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Proca1B0QZF7 307 aa12.27□□□□□ -0.45
Rnf41-201ENSMUST00000096386 Rad23aP54726 363 aa12.27□□□□□ -0.45
Rnf41-201ENSMUST00000096386 Usp13Q5BKP2 858 aa12.27□□□□□ -0.45
Rnf41-201ENSMUST00000096386 Klhl30Q8C3F7 581 aa12.27□□□□□ -0.45
Rnf41-201ENSMUST00000096386 Sugp2Q8CH09 1067 aa12.27□□□□□ -0.45
Rnf41-201ENSMUST00000096386 Xrcc4Q924T3 326 aa12.27□□□□□ -0.45
Rnf41-201ENSMUST00000096386 Ebag9Q9D0V7 213 aa12.27□□□□□ -0.45
Rnf41-201ENSMUST00000096386 Naa16Q9DBB4 864 aa12.27□□□□□ -0.45
Rnf41-201ENSMUST00000096386 Mroh1E0CZ22 1640 aa12.27□□□□□ -0.45
Rnf41-201ENSMUST00000096386 Abcc12Q80WJ6 1366 aa12.27□□□□□ -0.45
Rnf41-201ENSMUST00000096386 Zfp275G3X904 499 aa12.26□□□□□ -0.45
Rnf41-201ENSMUST00000096386 Pfkfb2P70265 519 aa12.26□□□□□ -0.45
Rnf41-201ENSMUST00000096386 Rnf187Q8BFX1 236 aa12.26□□□□□ -0.45
Rnf41-201ENSMUST00000096386 Ndufab1Q9CR21 156 aa12.26□□□□□ -0.45
Rnf41-201ENSMUST00000096386 Slc52a2Q9D8F3 450 aa12.26□□□□□ -0.45
Rnf41-201ENSMUST00000096386 Telo2Q9DC40 840 aaKnown RBP12.26□□□□□ -0.45
Rnf41-201ENSMUST00000096386 Dctpp1Q9QY93 170 aa12.26□□□□□ -0.45
Rnf41-201ENSMUST00000096386 Rimbp3Q3V0F0 1606 aa12.26□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms