RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 Sik1Q60670 779 aa13.66□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Gramd4Q8CB44 633 aa13.66□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Calml3Q9D6P8 149 aa13.66□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Ccdc89Q9DA73 370 aa13.66□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Atg4a-psA0A0G2JFS9 396 aa13.66□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Tpx2A2APB8 745 aaKnown RBP13.66□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Olfr247E9PVJ7 320 aa13.66□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Olfr819K7N727 320 aa13.66□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Ccdc189Q6NZQ0 333 aa13.66□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Spata24Q6P926 205 aa13.66□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Ppp2r5bQ6PD28 497 aa13.66□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Atg4aQ8C9S8 396 aa13.66□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Scaf11E9PZM7 1456 aaKnown RBP13.65□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Tex14Q7M6U3 1450 aa13.65□□□□□ -0.22
Col8a1-201ENSMUST00000089332 1700018F24RikB2RW27 314 aa13.65□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Nfil3O08750 462 aa13.65□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Clul1Q3ZRW6 464 aa13.65□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Specc1Q5SXY1 1067 aa13.65□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Caprin2Q05A80 1031 aaKnown RBP13.65□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Lin9Q8C735 542 aa13.65□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Tut1Q8R3F9 869 aa13.65□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Col20a1Q923P0 1320 aa13.65□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Gcc2Q8CHG3 1679 aa13.65□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Mapkapk5O54992 473 aa13.65□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Tubb4bP68372 445 aaKnown RBP13.65□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Ifih1Q8R5F7 1025 aa13.65□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Ppp6r3Q922D4 844 aa13.65□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Cep19Q9CQA8 163 aa13.65□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Ndufa8Q9DCJ5 172 aa13.65□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Hip1rQ9JKY5 1068 aa13.65□□□□□ -0.22
Col8a1-201ENSMUST00000089332 Zfp213E9QAW0 468 aa13.65□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Zkscan4Q5SZT6 480 aa13.65□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Mcm7Q61881 719 aaKnown RBP13.65□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Pym1Q8CHP5 203 aaKnown RBP13.65□□□□□ -0.23
Col8a1-201ENSMUST00000089332 AdpgkQ8VDL4 496 aa13.65□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Stox1B2RQL2 990 aa13.64□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Tdo2P48776 406 aa13.64□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Cdcp1Q5U462 833 aa13.64□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Arhgef1Q61210 920 aaKnown RBP13.64□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Taok3Q8BYC6 898 aa13.64□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Azi2Q9QYP6 405 aa13.64□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Utp18Q5SSI6 552 aaKnown RBP13.64□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Map3k12Q60700 888 aa13.64□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Mrps25Q9D125 171 aaKnown RBP13.64□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Tom1l2Q5SRX1 507 aa13.64□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Ccdc94Q9D6J3 314 aa13.64□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Senp1P59110 640 aa13.64□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Gm28047Q3US59 414 aa13.64□□□□□ -0.23
Col8a1-201ENSMUST00000089332 PicalmQ7M6Y3 660 aaKnown RBP13.64□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Ctdp1Q7TSG2 960 aa13.64□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Tsr2Q8C8T8 191 aa13.64□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Fam76aQ922G2 307 aa13.64□□□□□ -0.23
Col8a1-201ENSMUST00000089332 1700029H14RikE9PY36 240 aa13.63□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Tm6sf1P58749 370 aa13.63□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Ehbp1Q69ZW3 1231 aa13.63□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Tpcn2Q8BWC0 731 aa13.63□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Stac3Q8BZ71 360 aa13.63□□□□□ -0.23
Col8a1-201ENSMUST00000089332 4921504E06RikQ8CET2 560 aa13.63□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Edc3Q8K2D3 508 aaKnown RBP13.63□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Cyp27a1Q9DBG1 533 aa13.63□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Stxbp3Q60770 592 aa13.63□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Asic4Q7TNS7 539 aa13.63□□□□□ -0.23
Col8a1-201ENSMUST00000089332 AW822073A0A0N4SUK1 652 aa13.63□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Eif6O55135 245 aa13.63□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Large2Q5XPT3 690 aa13.63□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Haus6Q6NV99 933 aaKnown RBP13.63□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Cfap100Q80VN0 613 aa13.63□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Dclk3Q8BWQ5 790 aa13.63□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Ssfa2Q922B9 1252 aa13.63□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Tnnc1P19123 161 aa13.63□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Stmn4P63042 189 aa13.63□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Pex1Q5BL07 1284 aa13.63□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Lrrc2Q8VDB8 371 aa13.63□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Tbc1d2B1AVH7 922 aa13.62□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Trim28Q62318 834 aa13.62□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Cyp24a1Q64441 514 aa13.62□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Pcdhb2Q91Y00 799 aa13.62□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Lzts2Q91YU6 671 aa13.62□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Adamts12Q811B3 1600 aa13.62□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Bin2D3Z6Q9 489 aa13.62□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Abcb4P21440 1276 aa13.62□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Csrnp1P59054 583 aa13.62□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Gbp1Q01514 589 aa13.62□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Spata18Q0P557 537 aa13.62□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Pls1Q3V0K9 630 aa13.62□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Prdm1Q60636 856 aa13.62□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Bicd1Q8BR07 835 aa13.62□□□□□ -0.23
Col8a1-201ENSMUST00000089332 SdsQ8VBT2 327 aa13.62□□□□□ -0.23
Col8a1-201ENSMUST00000089332 SphkapQ6NSW3 1687 aa13.62□□□□□ -0.23
Col8a1-201ENSMUST00000089332 VrtnQ3SYK4 740 aa13.62□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Eif4a1P60843 406 aaKnown RBP13.62□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Top1Q04750 767 aaKnown RBP13.62□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Spa17Q62252 149 aa13.62□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Sestd1Q80UK0 696 aa13.62□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Fam177a1Q8BR63 207 aa13.62□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Tpd52l2Q9CYZ2 220 aaKnown RBP13.62□□□□□ -0.23
Col8a1-201ENSMUST00000089332 InsrrQ9WTL4 1300 aa13.61□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Ccdc85cE9Q6B2 420 aa13.61□□□□□ -0.23
Col8a1-201ENSMUST00000089332 PaoxQ8C0L6 504 aa13.61□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Xpo5Q924C1 1204 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms