RNA–Protein interactions for RNA: ENSMUST00000088653.2

Ccdc87-201, Transcript of Coiled-coil domain-containing protein 87, mousemouse

APPRIS P1 BASIC

Gene Ccdc87, Length 3,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87-201ENSMUST00000088653 CpvlQ9D3S9 478 aa12.11□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Ltn1Q6A009 1767 aa12.11□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 AfdnQ9QZQ1 1820 aaKnown RBP12.11□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Myh13B1AR69 1938 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 1700113H08RikE9Q9Q5 327 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Mcm3P25206 812 aaKnown RBP12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Stat5bP42232 786 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Siah1aP61092 282 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 IntuQ059U7 942 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Ccdc82Q6PG04 518 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Sept9Q80UG5 583 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Sil1Q9EPK6 465 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Rcan1Q9JHG6 198 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 CpdO89001 1377 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Gm20425E9Q035 978 aaKnown RBP12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Casp1P29452 402 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 SrprbP47758 269 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Ccdc174Q3U155 467 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Tmem109Q3UBX0 243 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Prdm1Q60636 856 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Mknk2Q8CDB0 459 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 RtcbQ99LF4 505 aaKnown RBP12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Add3Q9QYB5 706 aaKnown RBP12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Ly75Q60767 1723 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Ankrd63A2ARS0 390 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 CrcpO35427 148 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Slc4a4O88343 1079 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Ppfia3P60469 1194 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Cnnm2Q3TWN3 875 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Krt40Q6IFX3 439 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 VmacQ8BP01 174 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Pold4Q9CWP8 107 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Stag1Q9D3E6 1258 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Tktl2Q9D4D4 627 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Irs4Q9Z0Y7 1216 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Cdc45Q9Z1X9 566 aa12.1□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Cfap73J3QPZ5 306 aa12.09□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Cyp26a1O55127 497 aa12.09□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Olfml1Q8BSH2 233 aa12.09□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Fez1Q8K0X8 392 aa12.09□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Cfap99A0A140LIX9 648 aa12.09□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Ccdc173A0JLY1 547 aa12.09□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Cd3dP04235 173 aa12.09□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Cyp24a1Q64441 514 aa12.09□□□□□ -0.47
Ccdc87-201ENSMUST00000088653 Naaladl2A0A0N4SUJ3 795 aa12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Ccdc112A0AUP1 442 aa12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Il15P48346 162 aa12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Rps8P62242 208 aaKnown RBP12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Agtpbp1Q641K1 1218 aa12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Cxcl11Q9JHH5 100 aa12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Dock5B2RY04 1868 aa12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Col11a2Q64739 1736 aa12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Map3k15A2AQW0 1331 aa12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Aknad1E9Q8N6 675 aa12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Metap2O08663 478 aaKnown RBP12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Ccng2O08918 344 aa12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Ccdc162pQ0VG85 912 aa12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Rbm15bQ6PHZ5 887 aaKnown RBP12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Ttc27Q8CD92 847 aa12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Bola3Q8CEI1 110 aa12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Sde2Q8K1J5 448 aaKnown RBP12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Paf1Q8K2T8 535 aa12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Ccdc47Q9D024 483 aaKnown RBP12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Naa16Q9DBB4 864 aa12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Cfap58B2RW38 873 aa12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Tuft1O08970 390 aa12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 TrhQ62361 256 aa12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 SdsQ8VBT2 327 aa12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Bicd2Q921C5 820 aa12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Adarb2Q9JI20 745 aa12.08□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Myh6Q02566 1938 aaKnown RBP12.07□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Usp25P57080 1055 aa12.07□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Q3TYL0 343 aa12.07□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Sirt2Q8VDQ8 389 aa12.07□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 A0A1W2P7S8 802 aa12.07□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Gm7347D3YYI9 267 aa12.07□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Speer4aF8VPX6 267 aa12.07□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Eva1cP58659 440 aa12.07□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Cdkl5Q3UTQ8 938 aa12.07□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Ckap2Q3V1H1 664 aa12.07□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Cdc5lQ6A068 802 aaKnown RBP12.07□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Nyap1Q6PFX7 833 aa12.07□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Hps6Q8BLY7 805 aa12.07□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 DymQ8CHY3 669 aa12.07□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Erich6bQ9D4S6 220 aa12.07□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 TnmdQ9EP64 317 aa12.07□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Col4a3bpQ9EQG9 624 aa12.07□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Me1P06801 572 aa12.06□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Celf1P28659 486 aaKnown RBP12.06□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Arid3aQ62431 601 aa12.06□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Cdca8Q8BHX3 289 aa12.06□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Srek1Q8BZX4 494 aaKnown RBP12.06□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Amhr2Q8K592 568 aa12.06□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Dennd3A2RT67 1274 aa12.06□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Tyro3P55144 880 aa12.06□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Snx13Q6PHS6 957 aa12.06□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Telo2Q9DC40 840 aaKnown RBP12.06□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Kif3aP28741 701 aa12.06□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 HlfQ8BW74 295 aa12.06□□□□□ -0.48
Ccdc87-201ENSMUST00000088653 Aox3G3X982 1335 aa12.05□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms