RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Vmn1r218Q8R261 298 aa11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Gnl2Q99LH1 728 aaKnown RBP11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Ndufab1Q9CR21 156 aa11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Six6os1Q9CTN5 574 aa11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Akap8Q9DBR0 687 aaKnown RBP11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Ttc13A0A1L1SSC7 844 aa11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Pfkfb3A7UAK5 555 aa11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Pola2P33611 600 aa11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 PsdQ5DTT2 1024 aa11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Cep112Q5PR68 954 aa11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Ccdc93Q7TQK5 629 aa11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Pip4k2bQ80XI4 416 aa11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Gpatch3Q8BIY1 525 aa11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Hgh1Q8C3I8 393 aa11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 AmotQ8VHG2 1126 aa11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Plcb4Q91UZ1 1175 aa11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Znf24Q91VN1 368 aa11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Nek3Q9R0A5 511 aa11.07□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Pibf1E9Q6K3 756 aa11.06□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 FanccP50652 591 aa11.06□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Itga6Q61739 1091 aa11.06□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Rassf6Q80UQ2 353 aa11.06□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Ppfia2Q8BSS9 1257 aa11.06□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Riok3Q9DBU3 519 aaKnown RBP11.06□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Akr1e2Q9DCT1 301 aa11.06□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Zc3h4Q6ZPZ3 1304 aaKnown RBP11.06□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Kcnb2A6H8H5 907 aa11.06□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Itga9B8JK39 1036 aa11.06□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Arhgap6O54834 987 aa11.06□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Myo1bP46735 1107 aa11.06□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Iffo1Q8BXL9 562 aa11.06□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Calr3Q9D9Q6 380 aa11.06□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Tcof1O08784 1320 aaKnown RBP11.06□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Aox2Q5SGK3 1345 aa11.06□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Rims1Q99NE5 1463 aa11.06□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 AU022751B1B0V2 589 aa11.05□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Slc1a4O35874 532 aa11.05□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Nat1P50294 290 aa11.05□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Gigyf2Q6Y7W8 1291 aaKnown RBP11.05□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Tsr2Q8C8T8 191 aa11.05□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Abca8aQ8K442 1620 aa11.05□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Ift172Q6VH22 1749 aa11.05□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Proca1B0QZF7 307 aa11.05□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Serpinb6dQ3UWK8 375 aa11.05□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 VeztQ3ZK22 780 aa11.05□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Znf697Q569E7 569 aa11.05□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Unc5clQ6R653 518 aa11.05□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Gbp9Q8BTS3 619 aa11.05□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Acsbg1Q99PU5 721 aa11.05□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Nphp1Q9QY53 687 aa11.05□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Itgb1bp2Q9R000 350 aa11.05□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Plekhd1B2RPU2 505 aa11.04□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 ZwintQ9CQU5 252 aa11.04□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Slc12a4Q9JIS8 1085 aa11.04□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Myo3aQ8K3H5 1613 aa11.04□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 FscbA1EGX6 1074 aa11.04□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Diaph1O08808 1255 aa11.04□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 ChukQ60680 745 aa11.04□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Snd1Q78PY7 910 aaKnown RBP11.04□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Trpa1Q8BLA8 1125 aa11.04□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Me3Q8BMF3 604 aa11.04□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Triml1Q8BVP1 470 aa11.04□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Os9Q8K2C7 672 aa11.04□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Cep72Q9D3R3 646 aa11.04□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Scgb2b7D3YYY1 112 aa11.04□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Ezh1P70351 747 aa11.04□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Flt3Q00342 1000 aa11.04□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Tbx2Q60707 711 aa11.04□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 GphnQ8BUV3 769 aaKnown RBP11.04□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Q8BWG4 1187 aa11.04□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Lin7aQ8JZS0 233 aa11.04□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Slf1Q8R3P9 1054 aa11.04□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Bzw1Q9CQC6 419 aaKnown RBP11.04□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Mphosph6Q9D1Q1 161 aa11.04□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 ShprhQ7TPQ3 1674 aa11.03□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Akap12Q9WTQ5 1684 aa11.03□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Nup160Q9Z0W3 1402 aaKnown RBP11.03□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Pdia2D3Z6P0 527 aa11.03□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Ebf2O08792 575 aa11.03□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Pde8aO88502 823 aa11.03□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Ttf2Q5NC05 1138 aa11.03□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Zcwpw1Q6IR42 630 aa11.03□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Ano1Q8BHY3 960 aa11.03□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Zfp317Q8C0Q5 607 aa11.03□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Hsd3b7Q9EQC1 369 aa11.03□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Col4a3bpQ9EQG9 624 aa11.03□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Iqgap3F8VQ29 1632 aa11.03□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Grin2dQ03391 1323 aa11.03□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Tpx2A2APB8 745 aaKnown RBP11.03□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Slc12a2P55012 1205 aa11.03□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Trpc6Q61143 930 aa11.03□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Sycp1Q62209 993 aa11.03□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Sorbs1Q62417 1290 aa11.03□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 WlsQ6DID7 541 aa11.03□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Efcab14Q8BGQ6 484 aa11.03□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Pcdhb3Q91XZ7 784 aa11.03□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Net1Q9Z206 595 aa11.03□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Plekhg1F6S200 1446 aa11.02□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Carmil3Q3UFQ8 1375 aa11.02□□□□□ -0.64
Hmgb1-201ENSMUST00000085546 Prdm16A2A935 1275 aa11.02□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms