RNA–Protein interactions for RNA: ENSMUST00000078680.12

Ush1c-202, Transcript of Harmonin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ush1c, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1c-202ENSMUST00000078680 Slc4a1P04919 929 aa17.54■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Vps54Q5SPW0 977 aa17.54■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Kiaa0753Q6A000 959 aa17.54■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Zscan22Q8BGS5 496 aa17.54■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Ccdc178Q8CDV0 866 aa17.54■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Adam1bQ8R534 806 aa17.54■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Riok1Q922Q2 567 aa17.54■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Fam84aQ9D650 292 aa17.54■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Kcnq5Q9JK45 933 aa17.54■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Col5a2Q3U962 1497 aa17.54■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Npc1l1Q6T3U4 1333 aa17.54■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Dpf2Q61103 391 aaKnown RBP17.54■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Fbxo2Q80UW2 297 aa17.54■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Ubxn10Q8BG34 277 aa17.54■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Tshz3Q8CGV9 1081 aa17.54■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Cchcr1Q8K2I2 770 aa17.54■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Slx4ipQ9D7Y9 413 aa17.54■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Stx6Q9JKK1 255 aa17.54■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Scn11aQ9R053 1765 aa17.53■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Mdm2P23804 489 aa17.53■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Ccdc51Q3URS9 406 aa17.53■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Nek11Q8C0Q4 628 aa17.53■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Rbm33Q9CXK9 1231 aaKnown RBP17.53■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Ltn1Q6A009 1767 aa17.53■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Cspp1B2RX88 1205 aa17.52■□□□□ 0.4
Ush1c-202ENSMUST00000078680 1700006A11RikB9EHI3 544 aa17.52■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Gm973E9Q295 1059 aa17.52■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Gpr162Q3UN16 588 aa17.52■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Plekhg6Q8R0J1 787 aa17.52■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Dhx30Q99PU8 1217 aaKnown RBP17.52■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Mrpl12Q9DB15 201 aaKnown RBP17.52■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Add2Q9QYB8 725 aa17.52■□□□□ 0.4
Ush1c-202ENSMUST00000078680 Phrf1A6H619 1682 aa17.52■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Oxsr1Q6P9R2 527 aa17.52■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Zfp251Q6PCX8 632 aa17.52■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Fam160b2Q80YR2 744 aa17.52■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Gjd4Q8BSD4 364 aa17.52■□□□□ 0.39
Ush1c-202ENSMUST00000078680 PdcQ9QW08 244 aa17.52■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Hmg20bQ9Z104 317 aa17.52■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Nup98Q6PFD9 1816 aaKnown RBP17.51■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Rbm8a2A0A0N4SUH6 174 aa17.51■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Ddx46Q569Z5 1032 aaKnown RBP17.51■□□□□ 0.39
Ush1c-202ENSMUST00000078680 ZyxQ62523 564 aa17.51■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Golim4Q8BXA1 655 aa17.51■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Rbm8aQ9CWZ3 174 aa17.51■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Irs4Q9Z0Y7 1216 aa17.51■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Carmil3Q3UFQ8 1375 aa17.51■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Cfap73J3QPZ5 306 aa17.5■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Fchsd1Q6PFY1 688 aa17.5■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Bms1Q6PGF5 1284 aaKnown RBP17.5■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Samm50Q8BGH2 469 aa17.5■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Ak2Q9WTP6 239 aa17.5■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Psma5Q9Z2U1 241 aaKnown RBP17.5■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Nrxn2E9Q7X7 1710 aa17.5■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Zfp804bA0A0G2JGH6 1343 aa17.5■□□□□ 0.39
Ush1c-202ENSMUST00000078680 TnksQ6PFX9 1320 aa17.5■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Ankrd63A2ARS0 390 aa17.5■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Hap1O35668 628 aa17.5■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Cfap157Q0VFX2 523 aa17.5■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Znf428Q8C1M2 176 aa17.5■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Smc3Q9CW03 1217 aaKnown RBP17.5■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Chmp4cQ9D7F7 232 aa17.5■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Csrnp1P59054 583 aa17.49■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Gjb2Q00977 226 aa17.49■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Mmel1Q9JLI3 765 aa17.49■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Sgsm2Q80U12 1005 aa17.48■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Sept9Q80UG5 583 aa17.48■□□□□ 0.39
Ush1c-202ENSMUST00000078680 WdpcpQ8C456 722 aa17.48■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Atf7Q8R0S1 413 aa17.48■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Rufy3Q9D394 469 aa17.48■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Igbp1bQ9QZ29 343 aa17.48■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Setdb1O88974 1307 aa17.48■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Cyp3a57D3YYZ0 503 aa17.48■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Map3k9Q3U1V8 1077 aa17.48■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Vil1Q62468 827 aa17.48■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Nlrp9aQ66X03 949 aa17.48■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Ttc27Q8CD92 847 aa17.48■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Plcd3Q8K2J0 785 aa17.48■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Pik3ap1Q9EQ32 811 aa17.48■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Utp3Q9JI13 469 aaKnown RBP17.48■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Syt1P46096 421 aa17.47■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Pcmtd1P59913 357 aa17.47■□□□□ 0.39
Ush1c-202ENSMUST00000078680 StrbpQ91WM1 672 aaKnown RBP17.47■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Q9D9S1 216 aa17.47■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Gm5592Q3V0A6 857 aa17.47■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Thrap3Q569Z6 951 aaKnown RBP17.47■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Nup88Q8CEC0 753 aaKnown RBP17.47■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Rbm42Q91V81 474 aaKnown RBP17.47■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Add3Q9QYB5 706 aaKnown RBP17.47■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Zkscan7E9PVW1 718 aa17.46■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Dync1i1O88485 628 aa17.46■□□□□ 0.39
Ush1c-202ENSMUST00000078680 CfhP06909 1234 aa17.46■□□□□ 0.39
Ush1c-202ENSMUST00000078680 RubcnlQ3TD16 648 aa17.46■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Rnf180Q3U827 592 aa17.46■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Abtb2Q7TQI7 1024 aa17.46■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Kcnf1Q7TSH7 493 aa17.46■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Fam13bQ8K2H3 851 aa17.46■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Nop14Q8R3N1 860 aaKnown RBP17.46■□□□□ 0.39
Ush1c-202ENSMUST00000078680 Terf1P70371 421 aa17.45■□□□□ 0.38
Ush1c-202ENSMUST00000078680 Glis3Q6XP49 780 aa17.45■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms