RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Tacc3Q9JJ11 631 aa11.05□□□□□ -0.64
Syne1-201ENSMUST00000041639 Prl3d3A0A0M6L0J6 224 aa11.05□□□□□ -0.64
Syne1-201ENSMUST00000041639 Tpx2A2APB8 745 aaKnown RBP11.05□□□□□ -0.64
Syne1-201ENSMUST00000041639 Abcb4P21440 1276 aa11.05□□□□□ -0.64
Syne1-201ENSMUST00000041639 Sdccag8Q80UF4 717 aa11.05□□□□□ -0.64
Syne1-201ENSMUST00000041639 Edc3Q8K2D3 508 aaKnown RBP11.05□□□□□ -0.64
Syne1-201ENSMUST00000041639 Map3k7clP58500 142 aa11.05□□□□□ -0.64
Syne1-201ENSMUST00000041639 Anp32cQ64G17 123 aa11.05□□□□□ -0.64
Syne1-201ENSMUST00000041639 Zfp202Q8C879 641 aa11.05□□□□□ -0.64
Syne1-201ENSMUST00000041639 Krt77Q6IFZ6 572 aa11.05□□□□□ -0.64
Syne1-201ENSMUST00000041639 Ncaph2Q8BSP2 607 aa11.05□□□□□ -0.64
Syne1-201ENSMUST00000041639 Gucy1b3O54865 620 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 FanccP50652 591 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Ccpg1Q640L3 753 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Tpd52l2Q9CYZ2 220 aaKnown RBP11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Efhd1Q9D4J1 240 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Atg4a-psA0A0G2JFS9 396 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Prr16A3KMN5 304 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Dzip1lQ499E4 774 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Ccdc57Q6PHN1 1016 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Atg4aQ8C9S8 396 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Adcy3Q8VHH7 1145 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Ebag9Q9D0V7 213 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Mx1P09922 631 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Bach1P97302 739 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Gm5935Q497S0 212 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Pola1P33609 1465 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Rassf2Q8BMS9 326 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 AdpgkQ8VDL4 496 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Sorbs3Q9R1Z8 733 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Kiaa1024Q8K3V7 917 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 ParnQ8VDG3 624 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Fam114a1Q9D281 569 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Sept6Q9R1T4 434 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Dnajc25A2ALW5 357 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 MthfslL7N466 203 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Nbr1P97432 988 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Sestd1Q80UK0 696 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Prune1Q8BIW1 454 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Ccdc186Q8C9S4 917 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Rab3il1Q8VDV3 383 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Col4a3bpQ9EQG9 624 aa11.04□□□□□ -0.64
Syne1-201ENSMUST00000041639 Supt6hQ62383 1726 aaKnown RBP11.03□□□□□ -0.64
Syne1-201ENSMUST00000041639 Cops6O88545 324 aa11.03□□□□□ -0.64
Syne1-201ENSMUST00000041639 Hmgb2P30681 210 aaKnown RBP11.03□□□□□ -0.64
Syne1-201ENSMUST00000041639 Ppp1r3fQ9JIG4 799 aa11.03□□□□□ -0.64
Syne1-201ENSMUST00000041639 Prl7a2O54831 253 aa11.03□□□□□ -0.64
Syne1-201ENSMUST00000041639 Plcb3P51432 1234 aaKnown RBP11.03□□□□□ -0.64
Syne1-201ENSMUST00000041639 Snrpa1P57784 255 aaKnown RBP11.03□□□□□ -0.64
Syne1-201ENSMUST00000041639 Pdrg1P59048 133 aa11.03□□□□□ -0.64
Syne1-201ENSMUST00000041639 Rassf4Q8CB96 322 aa11.03□□□□□ -0.64
Syne1-201ENSMUST00000041639 SncbQ91ZZ3 133 aa11.03□□□□□ -0.64
Syne1-201ENSMUST00000041639 Pde3aQ9Z0X4 1141 aa11.03□□□□□ -0.64
Syne1-201ENSMUST00000041639 Kif5cP28738 956 aaKnown RBP11.03□□□□□ -0.64
Syne1-201ENSMUST00000041639 Ccdc113Q8C5T8 377 aa11.03□□□□□ -0.64
Syne1-201ENSMUST00000041639 Hexim1Q8R409 356 aaKnown RBP11.03□□□□□ -0.64
Syne1-201ENSMUST00000041639 Cdk13Q69ZA1 1511 aaKnown RBP11.03□□□□□ -0.64
Syne1-201ENSMUST00000041639 Leo1Q5XJE5 667 aa11.03□□□□□ -0.64
Syne1-201ENSMUST00000041639 CtcfQ61164 736 aaKnown RBP11.03□□□□□ -0.64
Syne1-201ENSMUST00000041639 Krit1Q6S5J6 736 aa11.03□□□□□ -0.64
Syne1-201ENSMUST00000041639 Nop56Q9D6Z1 580 aaKnown RBP11.03□□□□□ -0.64
Syne1-201ENSMUST00000041639 Prex2Q3LAC4 1598 aa11.03□□□□□ -0.64
Syne1-201ENSMUST00000041639 Diaph1O08808 1255 aa11.03□□□□□ -0.64
Syne1-201ENSMUST00000041639 Atp1a3Q6PIC6 1013 aa11.03□□□□□ -0.64
Syne1-201ENSMUST00000041639 Pde5aQ8CG03 865 aa11.03□□□□□ -0.64
Syne1-201ENSMUST00000041639 Nop2Q922K7 793 aaKnown RBP11.03□□□□□ -0.64
Syne1-201ENSMUST00000041639 CpvlQ9D3S9 478 aa11.03□□□□□ -0.64
Syne1-201ENSMUST00000041639 Btn2a2A4QPC6 514 aa11.02□□□□□ -0.64
Syne1-201ENSMUST00000041639 Drc1Q3USS3 753 aa11.02□□□□□ -0.64
Syne1-201ENSMUST00000041639 Ano8Q6PB70 1060 aa11.02□□□□□ -0.64
Syne1-201ENSMUST00000041639 Pcdhb22Q91XZ8 794 aa11.02□□□□□ -0.64
Syne1-201ENSMUST00000041639 Mcur1Q9CXD6 340 aa11.02□□□□□ -0.64
Syne1-201ENSMUST00000041639 Skor2A7M7C7 1008 aa11.02□□□□□ -0.64
Syne1-201ENSMUST00000041639 Sult6b1P0CC03 303 aa11.02□□□□□ -0.64
Syne1-201ENSMUST00000041639 Rrp1P56183 494 aaKnown RBP11.02□□□□□ -0.64
Syne1-201ENSMUST00000041639 Naa30Q8CES0 364 aa11.02□□□□□ -0.64
Syne1-201ENSMUST00000041639 Mkrn1Q9QXP6 481 aa11.02□□□□□ -0.64
Syne1-201ENSMUST00000041639 EspnlQ3UYR4 1005 aa11.02□□□□□ -0.65
Syne1-201ENSMUST00000041639 Pls1Q3V0K9 630 aa11.02□□□□□ -0.65
Syne1-201ENSMUST00000041639 Dclk3Q8BWQ5 790 aa11.02□□□□□ -0.65
Syne1-201ENSMUST00000041639 Lin9Q8C735 542 aa11.02□□□□□ -0.65
Syne1-201ENSMUST00000041639 Ndufab1Q9CR21 156 aa11.02□□□□□ -0.65
Syne1-201ENSMUST00000041639 Eya2O08575 532 aa11.02□□□□□ -0.65
Syne1-201ENSMUST00000041639 Hoxc9P09633 260 aa11.02□□□□□ -0.65
Syne1-201ENSMUST00000041639 Rpl13P47963 211 aaKnown RBP11.02□□□□□ -0.65
Syne1-201ENSMUST00000041639 Ttll12Q3UDE2 639 aa11.02□□□□□ -0.65
Syne1-201ENSMUST00000041639 Wdr3Q8BHB4 942 aaKnown RBP11.02□□□□□ -0.65
Syne1-201ENSMUST00000041639 Tpcn2Q8BWC0 731 aa11.02□□□□□ -0.65
Syne1-201ENSMUST00000041639 Krt20Q9D312 431 aa11.02□□□□□ -0.65
Syne1-201ENSMUST00000041639 Osbpl5Q9ER64 874 aa11.02□□□□□ -0.65
Syne1-201ENSMUST00000041639 Ssh2Q5SW75 1423 aa11.02□□□□□ -0.65
Syne1-201ENSMUST00000041639 Astn2Q80Z10 1352 aa11.02□□□□□ -0.65
Syne1-201ENSMUST00000041639 Arhgef12Q8R4H2 1543 aaKnown RBP11.02□□□□□ -0.65
Syne1-201ENSMUST00000041639 Ccdc38Q8CDN8 563 aa11.02□□□□□ -0.65
Syne1-201ENSMUST00000041639 PdiltQ9DAN1 588 aa11.02□□□□□ -0.65
Syne1-201ENSMUST00000041639 Stk36Q69ZM6 1316 aa11.02□□□□□ -0.65
Syne1-201ENSMUST00000041639 Snap23O09044 210 aa11.02□□□□□ -0.65
Syne1-201ENSMUST00000041639 Camk4P08414 469 aa11.02□□□□□ -0.65
Syne1-201ENSMUST00000041639 Art2aP17981 287 aa11.02□□□□□ -0.65
Syne1-201ENSMUST00000041639 Cdcp1Q5U462 833 aa11.02□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 89.3 ms