RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Wdr62Q3U3T8 1523 aa18.54■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Neo1P97798 1493 aa18.54■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Fancd2Q80V62 1450 aa18.54■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 DymQ8CHY3 669 aa18.54■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Trim68Q8K243 485 aa18.54■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Pik3ap1Q9EQ32 811 aa18.54■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Itgb1bp2Q9R000 350 aa18.54■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Ccdc174Q3U155 467 aa18.54■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Kif1bpQ6ZPU9 617 aa18.54■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Nek11Q8C0Q4 628 aa18.54■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Zfpm1O35615 995 aa18.54■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Ccdc189Q6NZQ0 333 aa18.54■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Ankrd35E9Q9D8 996 aa18.54■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Ranbp1P34022 203 aaKnown RBP18.54■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Slc4a4O88343 1079 aa18.54■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Gm5935Q497S0 212 aa18.54■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Luc7l3Q5SUF2 432 aaKnown RBP18.54■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Pak2Q8CIN4 524 aa18.54■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 GptQ8QZR5 496 aa18.54■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Skint5A7XUY5 1461 aa18.53■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Gm28047Q3US59 414 aa18.53■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Mpp4Q6P7F1 635 aa18.53■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Rab44Q8CB87 725 aa18.53■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Gbp6A0A0G2JDV3 611 aa18.53■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Armc3A2AU72 881 aa18.53■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Ccdc13D3YV10 709 aa18.53■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Gm43302L7N1X8 611 aa18.53■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Ppfia3P60469 1194 aa18.53■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Mcm7Q61881 719 aaKnown RBP18.53■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 MthfsQ9D110 203 aa18.53■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Drc3Q9D5E4 523 aa18.53■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Frmpd2A0A140LI67 1392 aa18.53■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Dnajc21E9Q8D0 531 aa18.53■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Ppp2r5bQ6PD28 497 aa18.53■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Kdm5cP41230 1554 aa18.52■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Nsfl1cQ9CZ44 370 aaKnown RBP18.52■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Q3TYL0 343 aa18.52■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Ano6Q6P9J9 911 aa18.52■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Mcmdc2E9Q956 681 aa18.52■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Eef2P58252 858 aaKnown RBP18.52■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 RilpQ5ND29 369 aa18.52■□□□□ 0.56
Ccdc88a-201ENSMUST00000040182 Ddx49Q4FZF3 480 aaKnown RBP18.52■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 RbsnQ80Y56 783 aa18.52■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Taf7lQ9D3R9 471 aa18.52■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Ccdc110Q3V125 848 aa18.52■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Efcc1Q9JJF6 558 aa18.52■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Gm10110D3Z5M2 615 aa18.51■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Esyt2Q3TZZ7 845 aa18.51■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Ddx24Q9ESV0 857 aaKnown RBP18.51■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Zc3h12cQ5DTV4 884 aa18.51■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 MmeQ61391 750 aa18.51■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Snd1Q78PY7 910 aaKnown RBP18.51■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Ribc1Q9D0B8 379 aa18.51■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Prpf40bQ80W14 870 aa18.51■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Tmem132aQ922P8 1018 aa18.51■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Taf7Q9R1C0 341 aa18.51■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Gm3409A0A0G2JE67 319 aa18.51■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Oas2E9Q9A9 742 aa18.51■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Krt20Q9D312 431 aa18.51■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Pdrg1P59048 133 aa18.51■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Cnnm4Q69ZF7 771 aa18.51■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Trim60Q8VI40 466 aa18.51■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Zbtb21E9Q444 1094 aa18.51■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Arhgef2Q60875 985 aa18.51■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Traf3ip3Q8C0G2 513 aa18.51■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Krt18P05784 423 aa18.5■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 PpanQ91YU8 470 aaKnown RBP18.5■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Frmpd1A2AKB4 1549 aa18.5■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Atp2b1G5E829 1220 aa18.5■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Chmp6P0C0A3 200 aa18.5■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Nlrp2Q4PLS0 1046 aaKnown RBP18.5■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 SpopQ6ZWS8 374 aa18.5■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Lzts2Q91YU6 671 aa18.5■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Klhdc4Q921I2 584 aa18.5■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Fam213aQ9CYH2 218 aa18.5■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Lrriq3Q14DL3 633 aa18.5■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Csrnp2Q8BGQ2 534 aa18.5■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Ncapd2Q8K2Z4 1392 aa18.5■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Gm10563F6WIE4 79 aa18.5■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Slx4ipQ9D7Y9 413 aa18.5■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Slc12a5Q91V14 1138 aa18.5■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Hs6st3Q9QYK4 470 aa18.5■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Pdia3P27773 505 aaKnown RBP18.49■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 BC005561E9Q5E2 1589 aa18.49■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Lrrc9Q8CDN9 1456 aa18.49■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Cdca7Q9D0M2 382 aa18.49■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Ano9P86044 747 aa18.49■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Tmx3Q8BXZ1 456 aa18.49■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Ubac1Q8VDI7 409 aa18.49■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Pnpla2Q8BJ56 486 aa18.49■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Olfm5Q8BU90 496 aa18.49■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Tsnaxip1Q99P25 704 aa18.49■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Nucb1Q02819 459 aaKnown RBP18.49■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Nucks1Q80XU3 234 aaKnown RBP18.49■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Stx12Q9ER00 274 aa18.49■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Apol7bB1AQP7 369 aa18.49■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Jade3Q6IE82 823 aa18.49■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Cnksr2Q80YA9 1032 aa18.48■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Gbp5Q8CFB4 590 aa18.48■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Mast3Q3U214 1321 aa18.48■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 41.3 ms