RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Wdr19Q3UGF1 1341 aa15.5■□□□□ 0.07
Nup88-201ENSMUST00000035283 Prpf4bQ61136 1007 aaKnown RBP15.5■□□□□ 0.07
Nup88-201ENSMUST00000035283 Abcf1Q6P542 837 aaKnown RBP15.5■□□□□ 0.07
Nup88-201ENSMUST00000035283 Cep120Q7TSG1 988 aa15.5■□□□□ 0.07
Nup88-201ENSMUST00000035283 Tada3Q8R0L9 432 aa15.5■□□□□ 0.07
Nup88-201ENSMUST00000035283 Sil1Q9EPK6 465 aa15.5■□□□□ 0.07
Nup88-201ENSMUST00000035283 Sik3Q6P4S6 1311 aa15.49■□□□□ 0.07
Nup88-201ENSMUST00000035283 Atp8b5A3FIN4 1183 aa15.49■□□□□ 0.07
Nup88-201ENSMUST00000035283 Prl3d2F6R3P9 224 aa15.49■□□□□ 0.07
Nup88-201ENSMUST00000035283 Dnm1P39053 867 aa15.49■□□□□ 0.07
Nup88-201ENSMUST00000035283 Tshz1Q5DTH5 1084 aa15.49■□□□□ 0.07
Nup88-201ENSMUST00000035283 Prl2c1Q5SVL9 228 aa15.49■□□□□ 0.07
Nup88-201ENSMUST00000035283 Ankib1Q6ZPS6 1085 aa15.49■□□□□ 0.07
Nup88-201ENSMUST00000035283 Map10Q8BJS7 891 aa15.49■□□□□ 0.07
Nup88-201ENSMUST00000035283 Ttc19Q8CC21 365 aa15.49■□□□□ 0.07
Nup88-201ENSMUST00000035283 Ccne2Q9Z238 404 aa15.49■□□□□ 0.07
Nup88-201ENSMUST00000035283 Carmil3Q3UFQ8 1375 aa15.49■□□□□ 0.07
Nup88-201ENSMUST00000035283 Cyp3a57D3YYZ0 503 aa15.49■□□□□ 0.07
Nup88-201ENSMUST00000035283 AK157302I3ITR1 129 aa15.49■□□□□ 0.07
Nup88-201ENSMUST00000035283 Ugt1a6bK9J7B2 531 aa15.49■□□□□ 0.07
Nup88-201ENSMUST00000035283 Cyp26a1O55127 497 aa15.49■□□□□ 0.07
Nup88-201ENSMUST00000035283 Myd88P22366 296 aa15.49■□□□□ 0.07
Nup88-201ENSMUST00000035283 Cplx1P63040 134 aa15.49■□□□□ 0.07
Nup88-201ENSMUST00000035283 Ugt1a6Q64435 531 aa15.49■□□□□ 0.07
Nup88-201ENSMUST00000035283 Ugt1a7cQ6ZQM8 531 aa15.49■□□□□ 0.07
Nup88-201ENSMUST00000035283 DymQ8CHY3 669 aa15.49■□□□□ 0.07
Nup88-201ENSMUST00000035283 Cnot6lQ8VEG6 555 aa15.49■□□□□ 0.07
Nup88-201ENSMUST00000035283 Tgs1Q923W1 853 aa15.49■□□□□ 0.07
Nup88-201ENSMUST00000035283 Tbc1d7Q9D0K0 293 aa15.49■□□□□ 0.07
Nup88-201ENSMUST00000035283 Isca1Q9D924 129 aa15.49■□□□□ 0.07
Nup88-201ENSMUST00000035283 Siglec1Q62230 1695 aa15.48■□□□□ 0.07
Nup88-201ENSMUST00000035283 Acap3Q6NXL5 833 aa15.48■□□□□ 0.07
Nup88-201ENSMUST00000035283 Prdm4Q80V63 803 aa15.48■□□□□ 0.07
Nup88-201ENSMUST00000035283 Ppp2r2cQ8BG02 447 aa15.48■□□□□ 0.07
Nup88-201ENSMUST00000035283 Haus7Q8BKT8 364 aa15.48■□□□□ 0.07
Nup88-201ENSMUST00000035283 Trim52Q8CDV4 233 aa15.48■□□□□ 0.07
Nup88-201ENSMUST00000035283 Nek9Q8K1R7 984 aa15.48■□□□□ 0.07
Nup88-201ENSMUST00000035283 Dctpp1Q9QY93 170 aa15.48■□□□□ 0.07
Nup88-201ENSMUST00000035283 Cyp2d9P11714 504 aa15.48■□□□□ 0.07
Nup88-201ENSMUST00000035283 Q66JV7 365 aa15.48■□□□□ 0.07
Nup88-201ENSMUST00000035283 Krt39Q6IFX4 482 aa15.48■□□□□ 0.07
Nup88-201ENSMUST00000035283 Maats1Q8BRC6 783 aa15.48■□□□□ 0.07
Nup88-201ENSMUST00000035283 Flad1Q8R123 492 aa15.48■□□□□ 0.07
Nup88-201ENSMUST00000035283 Sept12Q9D451 317 aa15.48■□□□□ 0.07
Nup88-201ENSMUST00000035283 Lonp2Q9DBN5 852 aa15.48■□□□□ 0.07
Nup88-201ENSMUST00000035283 Nek3Q9R0A5 511 aa15.48■□□□□ 0.07
Nup88-201ENSMUST00000035283 Lipo1J3QME6 396 aa15.47■□□□□ 0.07
Nup88-201ENSMUST00000035283 Anxa1P10107 346 aaKnown RBP15.47■□□□□ 0.07
Nup88-201ENSMUST00000035283 MyclP10166 368 aa15.47■□□□□ 0.07
Nup88-201ENSMUST00000035283 Anp32eP97822 260 aaKnown RBP15.47■□□□□ 0.07
Nup88-201ENSMUST00000035283 Edrf1Q6GQV7 1239 aa15.47■□□□□ 0.07
Nup88-201ENSMUST00000035283 Gm21663A0A0G2JE01 267 aa15.46■□□□□ 0.07
Nup88-201ENSMUST00000035283 Gm7361D3Z6R1 267 aa15.46■□□□□ 0.07
Nup88-201ENSMUST00000035283 5031410I06RikE9Q4E0 267 aa15.46■□□□□ 0.07
Nup88-201ENSMUST00000035283 Gm1979E9QAN3 267 aa15.46■□□□□ 0.07
Nup88-201ENSMUST00000035283 Gm10134F6ZQC6 126 aa15.46■□□□□ 0.07
Nup88-201ENSMUST00000035283 Gm5862K7N5V5 267 aa15.46■□□□□ 0.07
Nup88-201ENSMUST00000035283 Gm10220K7N660 267 aa15.46■□□□□ 0.07
Nup88-201ENSMUST00000035283 Dapk3O54784 448 aa15.46■□□□□ 0.07
Nup88-201ENSMUST00000035283 CtcfQ61164 736 aaKnown RBP15.46■□□□□ 0.07
Nup88-201ENSMUST00000035283 Ncoa7Q6DFV7 943 aa15.46■□□□□ 0.07
Nup88-201ENSMUST00000035283 Klhl30Q8C3F7 581 aa15.46■□□□□ 0.07
Nup88-201ENSMUST00000035283 EmbP21995 330 aa15.46■□□□□ 0.07
Nup88-201ENSMUST00000035283 Grin1P35438 938 aa15.46■□□□□ 0.07
Nup88-201ENSMUST00000035283 Gng11P61953 73 aa15.46■□□□□ 0.07
Nup88-201ENSMUST00000035283 Bag1Q60739 355 aa15.46■□□□□ 0.07
Nup88-201ENSMUST00000035283 Adam1aQ60813 791 aa15.46■□□□□ 0.07
Nup88-201ENSMUST00000035283 BcanQ61361 883 aa15.46■□□□□ 0.07
Nup88-201ENSMUST00000035283 Myl10Q62082 202 aa15.46■□□□□ 0.07
Nup88-201ENSMUST00000035283 Fam170aQ66LM6 333 aa15.46■□□□□ 0.07
Nup88-201ENSMUST00000035283 Tpm4Q6IRU2 248 aa15.46■□□□□ 0.07
Nup88-201ENSMUST00000035283 Larp6Q8BN59 492 aa15.46■□□□□ 0.07
Nup88-201ENSMUST00000035283 Desi2Q9D291 194 aa15.46■□□□□ 0.07
Nup88-201ENSMUST00000035283 Gm5624F6ZZG8 207 aa15.45■□□□□ 0.06
Nup88-201ENSMUST00000035283 Metap2O08663 478 aaKnown RBP15.45■□□□□ 0.06
Nup88-201ENSMUST00000035283 Specc1lQ2KN98 1118 aaKnown RBP15.45■□□□□ 0.06
Nup88-201ENSMUST00000035283 Slc5a1Q8C3K6 665 aa15.45■□□□□ 0.06
Nup88-201ENSMUST00000035283 ImmtQ8CAQ8 757 aaKnown RBP15.45■□□□□ 0.06
Nup88-201ENSMUST00000035283 Tubgcp2Q921G8 905 aa15.45■□□□□ 0.06
Nup88-201ENSMUST00000035283 Kcnh3Q9WVJ0 1095 aa15.45■□□□□ 0.06
Nup88-201ENSMUST00000035283 CpdO89001 1377 aa15.45■□□□□ 0.06
Nup88-201ENSMUST00000035283 Ric8aQ3TIR3 530 aa15.45■□□□□ 0.06
Nup88-201ENSMUST00000035283 Arhgef16Q3U5C8 713 aa15.45■□□□□ 0.06
Nup88-201ENSMUST00000035283 Znf653Q6YND2 615 aa15.45■□□□□ 0.06
Nup88-201ENSMUST00000035283 Smc4Q8CG47 1286 aa15.45■□□□□ 0.06
Nup88-201ENSMUST00000035283 Speer4bQ9D9F7 267 aa15.45■□□□□ 0.06
Nup88-201ENSMUST00000035283 Appbp2Q9DAX9 585 aa15.45■□□□□ 0.06
Nup88-201ENSMUST00000035283 Ank1Q02357 1862 aa15.45■□□□□ 0.06
Nup88-201ENSMUST00000035283 Sycp2lA0A0M3U1B0 842 aa15.44■□□□□ 0.06
Nup88-201ENSMUST00000035283 Btn2a2A4QPC6 514 aa15.44■□□□□ 0.06
Nup88-201ENSMUST00000035283 Ranbp6Q8BIV3 1105 aa15.44■□□□□ 0.06
Nup88-201ENSMUST00000035283 Emilin1Q99K41 1017 aa15.44■□□□□ 0.06
Nup88-201ENSMUST00000035283 Fam213aQ9CYH2 218 aa15.44■□□□□ 0.06
Nup88-201ENSMUST00000035283 TsksO54887 585 aa15.44■□□□□ 0.06
Nup88-201ENSMUST00000035283 Me1P06801 572 aa15.44■□□□□ 0.06
Nup88-201ENSMUST00000035283 NefhP19246 1090 aa15.44■□□□□ 0.06
Nup88-201ENSMUST00000035283 PsdQ5DTT2 1024 aa15.44■□□□□ 0.06
Nup88-201ENSMUST00000035283 Asnsd1Q8BFS9 627 aa15.44■□□□□ 0.06
Nup88-201ENSMUST00000035283 Ctdspl2Q8BG15 465 aa15.44■□□□□ 0.06
Nup88-201ENSMUST00000035283 Bola3Q8CEI1 110 aa15.44■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 163.9 ms