RNA–Protein interactions for RNA: ENSMUST00000030637.13

Ncdn-201, Transcript of Neurochondrin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncdn, Length 3,681 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncdn-201ENSMUST00000030637 Prpf4bQ61136 1007 aaKnown RBP12.78□□□□□ -0.36
Ncdn-201ENSMUST00000030637 Abtb2Q7TQI7 1024 aa12.78□□□□□ -0.36
Ncdn-201ENSMUST00000030637 Ciao1Q99KN2 339 aa12.78□□□□□ -0.36
Ncdn-201ENSMUST00000030637 Lonrf3Q9D4H7 753 aa12.78□□□□□ -0.36
Ncdn-201ENSMUST00000030637 Arglu1Q3UL36 271 aaKnown RBP12.77□□□□□ -0.36
Ncdn-201ENSMUST00000030637 Ano6Q6P9J9 911 aa12.77□□□□□ -0.36
Ncdn-201ENSMUST00000030637 Fam102bQ8BQS4 339 aa12.77□□□□□ -0.36
Ncdn-201ENSMUST00000030637 E4f1Q8CCE9 783 aa12.77□□□□□ -0.36
Ncdn-201ENSMUST00000030637 Ginm1Q91WR6 327 aa12.77□□□□□ -0.36
Ncdn-201ENSMUST00000030637 Pold4Q9CWP8 107 aa12.77□□□□□ -0.36
Ncdn-201ENSMUST00000030637 Npc1l1Q6T3U4 1333 aa12.77□□□□□ -0.36
Ncdn-201ENSMUST00000030637 Ccdc112A0AUP1 442 aa12.77□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Ppp1r21Q3TDD9 780 aa12.77□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Drc7Q6V3W6 876 aa12.77□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Znf653Q6YND2 615 aa12.77□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Atad2Q8CDM1 1040 aa12.77□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Pcdhb15Q91Y04 786 aa12.77□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Tktl2Q9D4D4 627 aa12.77□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Cdc45Q9Z1X9 566 aa12.77□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Tbc1d4Q8BYJ6 1307 aa12.77□□□□□ -0.37
Ncdn-201ENSMUST00000030637 1700113H08RikE9Q9Q5 327 aa12.77□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Ubxn4Q8VCH8 506 aa12.77□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Ces1dQ8VCT4 565 aa12.77□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Rbm43Q99J64 343 aa12.77□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Zkscan5Q9Z1D8 819 aa12.77□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Srek1Q8BZX4 494 aaKnown RBP12.76□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Otud6bQ8K2H2 294 aa12.76□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Nop14Q8R3N1 860 aaKnown RBP12.76□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Kdm3aQ6PCM1 1323 aa12.76□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Prr29B1ARI9 187 aa12.76□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Ranbp1P34022 203 aaKnown RBP12.76□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Ncaph2Q8BSP2 607 aa12.76□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Ttc12Q8BW49 704 aa12.76□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Ppp4r3bQ922R5 820 aa12.76□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Ccdc39Q9D5Y1 937 aa12.76□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Lmtk3Q5XJV6 1424 aa12.76□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Arhgap4B1AUY3 965 aa12.76□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Zscan29E9Q5B4 869 aa12.76□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Cyp26a1O55127 497 aa12.76□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Prl3d1P18121 224 aa12.76□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Cdcp1Q5U462 833 aa12.76□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Krt24A1L317 512 aa12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Brpf3B2KF05 1204 aaKnown RBP12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Cyp2d9P11714 504 aa12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Csrnp1P59054 583 aa12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 AbraQ8BUZ1 375 aa12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Mtmr3Q8K296 1196 aa12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Eaf2Q91ZD6 262 aa12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Ybx3Q9JKB3 361 aaKnown RBP12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Clic4Q9QYB1 253 aa12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Irs4Q9Z0Y7 1216 aa12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 1700017N19RikA0A087WPJ1 469 aa12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Lcmt1A0A0U1RNF2 332 aa12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Kcnh4A2A5F7 1018 aa12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Trim55G3X8Y1 545 aa12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Sept1P42209 366 aa12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Lins1Q3U1D0 764 aa12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 CtcfQ61164 736 aaKnown RBP12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Sec62Q8BU14 398 aaKnown RBP12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Alg3Q8K2A8 438 aa12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Nup133Q8R0G9 1155 aa12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Bcl2l12Q9D3J3 255 aa12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Mast3Q3U214 1321 aa12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 1700029H14RikE9PY36 240 aa12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Fam83bQ0VBM2 1012 aa12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Srp68Q8BMA6 625 aaKnown RBP12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Pm20d1Q8C165 503 aa12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Hps3Q91VB4 1002 aa12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Ccdc96Q9CR92 584 aa12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Letm1Q9Z2I0 738 aa12.75□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Dlg5E9Q9R9 1921 aa12.74□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Ccdc34Q3UI66 367 aa12.74□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Gimap8Q75N62 688 aa12.74□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Ppm1eQ80TL0 749 aa12.74□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Tpcn2Q8BWC0 731 aa12.74□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Rassf4Q8CB96 322 aa12.74□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Iqca1Q9CUL5 857 aa12.74□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Syt10Q9R0N4 523 aa12.74□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Prl7d1P04769 244 aa12.74□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Kcnj14Q8JZN3 434 aa12.74□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Slc14a2Q8R4T9 930 aa12.74□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Crb1Q8VHS2 1405 aa12.74□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Nrbp1Q99J45 535 aa12.74□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Tpm3P21107 285 aaKnown RBP12.74□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Cyp24a1Q64441 514 aa12.74□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Paf1Q8K2T8 535 aa12.74□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Suclg2Q9Z2I8 433 aa12.74□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Mroh6V9GX81 722 aa12.74□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Plcb3P51432 1234 aaKnown RBP12.73□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Plbd2Q3TCN2 594 aa12.73□□□□□ -0.37
Ncdn-201ENSMUST00000030637 RubcnlQ3TD16 648 aa12.73□□□□□ -0.37
Ncdn-201ENSMUST00000030637 SrrtQ99MR6 875 aaKnown RBP12.73□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Foxo4Q9WVH3 505 aa12.73□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Atp8b3Q6UQ17 1335 aa12.73□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Exosc10P56960 887 aaKnown RBP12.73□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Cep135Q6P5D4 1140 aa12.73□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Atp2b1G5E829 1220 aa12.73□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Hap1O35668 628 aa12.73□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Atp1b3P97370 278 aa12.73□□□□□ -0.37
Ncdn-201ENSMUST00000030637 Ehmt1Q5DW34 1296 aa12.73□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms