RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 Rnf41Q8BH75 317 aa9.13□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Ncaph2Q8BSP2 607 aa9.13□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Stn1Q8K2X3 378 aa9.13□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Hps4Q99KG7 671 aa9.13□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Shank2Q80Z38 1476 aa9.13□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Slc1a4O35874 532 aa9.12□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Il4rP16382 810 aa9.12□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Hook1Q8BIL5 728 aa9.12□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Gpatch3Q8BIY1 525 aa9.12□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Terf2ipQ91VL8 393 aa9.12□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Sf3b3Q921M3 1217 aaKnown RBP9.12□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Cdc45Q9Z1X9 566 aa9.12□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Wdr78E9PYY5 807 aa9.12□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Plekhf1Q3TB82 279 aa9.12□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 HelbQ6NVF4 1074 aa9.12□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Tmx3Q8BXZ1 456 aa9.12□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 CerkQ8K4Q7 531 aa9.12□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 SdsQ8VBT2 327 aa9.12□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Map3k15A2AQW0 1331 aa9.12□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Zscan20B2KFW1 1030 aa9.12□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Cyp26a1O55127 497 aa9.12□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Fam198bQ3UPI1 517 aa9.12□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Srek1Q8BZX4 494 aaKnown RBP9.12□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Pcdhb22Q91XZ8 794 aa9.12□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 TnmdQ9EP64 317 aa9.12□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Suclg2Q9Z2I8 433 aa9.12□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Vmn2r23E9PXI5 849 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Leo1Q5XJE5 667 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Evc2Q8K1G2 1220 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 ParnQ8VDG3 624 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Ccar2Q8VDP4 922 aaKnown RBP9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Ppil4Q9CXG3 492 aaKnown RBP9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 4931408C20RikE9PWP9 1381 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Prss40A6H6T1 365 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 1700006A11RikB9EHI3 544 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Eef2kO08796 724 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Pde11aP0C1Q2 933 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Gnat2P50149 354 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Bach1P97302 739 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Cdkl5Q3UTQ8 938 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 ZyxQ62523 564 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Tekt3Q6X6Z7 490 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Tpcn2Q8BWC0 731 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Strip1Q8C079 837 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Bcl11aQ9QYE3 773 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Ube2hP62257 183 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Chrna5Q2MKA5 467 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Gas2l3Q3UWW6 683 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Mdh1bQ5F204 500 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Map3k12Q60700 888 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Atxn2lQ7TQH0 1049 aaKnown RBP9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Sp8Q8BMJ8 486 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Olfml1Q8BSH2 233 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Rec8Q8C5S7 591 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 UvssaQ9D479 717 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Cyp2ab1S4R196 498 aa9.11□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Prr16A3KMN5 304 aa9.1□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Gm21969J3QJZ1 289 aa9.1□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Usp53P15975 1069 aa9.1□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Rtkn2Q14B46 604 aa9.1□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Cnnm2Q3TWN3 875 aa9.1□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Srgap1Q91Z69 1062 aa9.1□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Stag1Q9D3E6 1258 aa9.1□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Cyp2d34L7N463 504 aa9.1□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Ccdc174Q3U155 467 aa9.1□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Triml1Q8BVP1 470 aa9.1□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Cep89Q9CZX2 791 aa9.1□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Gm9992B2RWK3 458 aa9.1□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Eif6O55135 245 aa9.1□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Atp1a3Q6PIC6 1013 aa9.1□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Unc93aQ710D3 458 aa9.1□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Ankrd13aQ80UP5 588 aa9.1□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Sik3Q6P4S6 1311 aa9.09□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Abca15E9PWH4 1668 aa9.09□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Dhx8A2A4P0 1244 aaKnown RBP9.09□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Prdm11A2AGX3 565 aa9.09□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Eme2Q56A04 373 aa9.09□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Prpf4bQ61136 1007 aaKnown RBP9.09□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Pcdhb5Q91XZ5 792 aa9.09□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Med4Q9CQA5 270 aa9.09□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Fbxo3Q9DC63 480 aa9.09□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Ripk4Q9ERK0 786 aa9.09□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Cxcl11Q9JHH5 100 aa9.09□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Sel1lQ9Z2G6 790 aa9.09□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Nav1Q8CH77 1875 aa9.09□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Kcnb2A6H8H5 907 aa9.09□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Lnx1O70263 728 aa9.09□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Wdr93Q402B2 695 aa9.09□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 MycbpapQ5SUV2 932 aa9.09□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Zfp113Q8C689 439 aa9.09□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Kcnj14Q8JZN3 434 aa9.09□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 RabggtaQ9JHK4 567 aa9.09□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Igbp1bQ9QZ29 343 aa9.09□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Homer1Q9Z2Y3 366 aa9.09□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Ddx60E9PZQ1 1711 aa9.09□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Cd22P35329 862 aa9.09□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Pald1P70261 859 aa9.09□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Znf653Q6YND2 615 aa9.09□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Nme8Q715T0 586 aa9.09□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Bola3Q8CEI1 110 aa9.09□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms