RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Podxl2Q8CAE9 603 aa12.46□□□□□ -0.42
Msh3-201ENSMUST00000022220 Tmc2Q8R4P4 888 aa12.46□□□□□ -0.42
Msh3-201ENSMUST00000022220 Srgap1Q91Z69 1062 aa12.46□□□□□ -0.42
Msh3-201ENSMUST00000022220 Iqsec2Q5DU25 1478 aa12.46□□□□□ -0.42
Msh3-201ENSMUST00000022220 Stx1aO35526 288 aa12.45□□□□□ -0.42
Msh3-201ENSMUST00000022220 MycbpapQ5SUV2 932 aa12.45□□□□□ -0.42
Msh3-201ENSMUST00000022220 Me3Q8BMF3 604 aa12.45□□□□□ -0.42
Msh3-201ENSMUST00000022220 Rassf4Q8CB96 322 aa12.45□□□□□ -0.42
Msh3-201ENSMUST00000022220 Kcnq3Q8K3F6 873 aa12.45□□□□□ -0.42
Msh3-201ENSMUST00000022220 Gnl2Q99LH1 728 aaKnown RBP12.45□□□□□ -0.42
Msh3-201ENSMUST00000022220 Stxbp4Q9WV89 557 aa12.45□□□□□ -0.42
Msh3-201ENSMUST00000022220 Mast3Q3U214 1321 aa12.45□□□□□ -0.42
Msh3-201ENSMUST00000022220 Abca17E9PX95 1733 aa12.45□□□□□ -0.42
Msh3-201ENSMUST00000022220 Zbtb7aO88939 569 aaKnown RBP12.45□□□□□ -0.42
Msh3-201ENSMUST00000022220 Ranbp1P34022 203 aaKnown RBP12.45□□□□□ -0.42
Msh3-201ENSMUST00000022220 Cep131Q62036 1060 aa12.45□□□□□ -0.42
Msh3-201ENSMUST00000022220 Tekt3Q6X6Z7 490 aa12.45□□□□□ -0.42
Msh3-201ENSMUST00000022220 Gm42641I6L9G2 585 aa12.45□□□□□ -0.42
Msh3-201ENSMUST00000022220 Rps8P62242 208 aaKnown RBP12.45□□□□□ -0.42
Msh3-201ENSMUST00000022220 Bag1Q60739 355 aa12.45□□□□□ -0.42
Msh3-201ENSMUST00000022220 Nyap1Q6PFX7 833 aa12.45□□□□□ -0.42
Msh3-201ENSMUST00000022220 Cep120Q7TSG1 988 aa12.45□□□□□ -0.42
Msh3-201ENSMUST00000022220 Sgsm2Q80U12 1005 aa12.45□□□□□ -0.42
Msh3-201ENSMUST00000022220 Clca2Q8BG22 942 aa12.45□□□□□ -0.42
Msh3-201ENSMUST00000022220 AtripQ8BMG1 785 aa12.45□□□□□ -0.42
Msh3-201ENSMUST00000022220 Ccz1Q8C1Y8 480 aa12.45□□□□□ -0.42
Msh3-201ENSMUST00000022220 Cyp26c1B2RXA7 518 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Znf568E9PYI1 671 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Atp8a2P98200 1148 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Ttll12Q3UDE2 639 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Fam228bQ497Q6 232 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Large2Q5XPT3 690 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Atp1a3Q6PIC6 1013 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Trim52Q8CDV4 233 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Trim11Q99PQ2 467 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Btn2a2A4QPC6 514 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Eif6O55135 245 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Atp6v1aP50516 617 aaKnown RBP12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Samsn1P57725 372 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 TrhQ62361 256 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Susd4Q8BH32 490 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Olfm5Q8BU90 496 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Wasf1Q8R5H6 559 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Terf2ipQ91VL8 393 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Rbm43Q99J64 343 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Emilin1Q99K41 1017 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Tktl2Q9D4D4 627 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 DonsonQ9QXP4 560 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Ehbp1l1Q99MS7 1716 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Pde8bE9Q4S1 865 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Ms4a1P19437 291 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Kmt5bQ3U8K7 883 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Morc2aQ69ZX6 1030 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Prdm4Q80V63 803 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 SdsQ8VBT2 327 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 Ssfa2Q922B9 1252 aa12.44□□□□□ -0.42
Msh3-201ENSMUST00000022220 FanccP50652 591 aa12.43□□□□□ -0.42
Msh3-201ENSMUST00000022220 Lrrc8aQ80WG5 810 aa12.43□□□□□ -0.42
Msh3-201ENSMUST00000022220 RbsnQ80Y56 783 aa12.43□□□□□ -0.42
Msh3-201ENSMUST00000022220 Mrpl50Q8VDT9 159 aaKnown RBP12.43□□□□□ -0.42
Msh3-201ENSMUST00000022220 Ccdc43Q9CR29 222 aaKnown RBP12.43□□□□□ -0.42
Msh3-201ENSMUST00000022220 Ktn1Q61595 1327 aaKnown RBP12.43□□□□□ -0.42
Msh3-201ENSMUST00000022220 Parp14Q2EMV9 1817 aa12.43□□□□□ -0.42
Msh3-201ENSMUST00000022220 Fam193aQ8CGI1 1231 aaKnown RBP12.43□□□□□ -0.42
Msh3-201ENSMUST00000022220 Pold4Q9CWP8 107 aa12.43□□□□□ -0.42
Msh3-201ENSMUST00000022220 Tubgcp6G5E8P0 1769 aa12.43□□□□□ -0.42
Msh3-201ENSMUST00000022220 A0A1L1SQF0 893 aa12.43□□□□□ -0.42
Msh3-201ENSMUST00000022220 Gtpbp6Q3U6U5 514 aa12.43□□□□□ -0.42
Msh3-201ENSMUST00000022220 Ttc27Q8CD92 847 aa12.43□□□□□ -0.42
Msh3-201ENSMUST00000022220 Arid4aF8VPQ2 1261 aaKnown RBP12.43□□□□□ -0.42
Msh3-201ENSMUST00000022220 Actn3O88990 900 aaKnown RBP12.43□□□□□ -0.42
Msh3-201ENSMUST00000022220 Myo1bP46735 1107 aa12.43□□□□□ -0.42
Msh3-201ENSMUST00000022220 Ap5z1Q3U829 807 aa12.43□□□□□ -0.42
Msh3-201ENSMUST00000022220 Ift122Q6NWV3 1182 aa12.43□□□□□ -0.42
Msh3-201ENSMUST00000022220 DlatQ8BMF4 642 aa12.43□□□□□ -0.42
Msh3-201ENSMUST00000022220 BrapQ99MP8 591 aa12.43□□□□□ -0.42
Msh3-201ENSMUST00000022220 Ccdc96Q9CR92 584 aa12.43□□□□□ -0.42
Msh3-201ENSMUST00000022220 MicalclQ9D5U9 680 aa12.43□□□□□ -0.42
Msh3-201ENSMUST00000022220 SetQ9EQU5 289 aaKnown RBP12.43□□□□□ -0.42
Msh3-201ENSMUST00000022220 Ybx3Q9JKB3 361 aaKnown RBP12.43□□□□□ -0.42
Msh3-201ENSMUST00000022220 Ccdc112A0AUP1 442 aa12.42□□□□□ -0.42
Msh3-201ENSMUST00000022220 Znf532Q6NXK2 1036 aa12.42□□□□□ -0.42
Msh3-201ENSMUST00000022220 Trak2Q6P9N8 913 aa12.42□□□□□ -0.42
Msh3-201ENSMUST00000022220 Fam76aQ922G2 307 aa12.42□□□□□ -0.42
Msh3-201ENSMUST00000022220 Dph6Q9CQ28 267 aa12.42□□□□□ -0.42
Msh3-201ENSMUST00000022220 Ttc14Q9CSP9 761 aa12.42□□□□□ -0.42
Msh3-201ENSMUST00000022220 Efcc1Q9JJF6 558 aa12.42□□□□□ -0.42
Msh3-201ENSMUST00000022220 Abcc10Q8R4P9 1501 aa12.42□□□□□ -0.42
Msh3-201ENSMUST00000022220 Nfatc2ipO09130 412 aa12.42□□□□□ -0.42
Msh3-201ENSMUST00000022220 Rtel1Q0VGM9 1203 aa12.42□□□□□ -0.42
Msh3-201ENSMUST00000022220 ItpripQ3TNL8 555 aa12.42□□□□□ -0.42
Msh3-201ENSMUST00000022220 CtcfQ61164 736 aaKnown RBP12.42□□□□□ -0.42
Msh3-201ENSMUST00000022220 Asap2Q7SIG6 958 aa12.42□□□□□ -0.42
Msh3-201ENSMUST00000022220 Luzp1Q8R4U7 1068 aaKnown RBP12.42□□□□□ -0.42
Msh3-201ENSMUST00000022220 Ccne2Q9Z238 404 aa12.42□□□□□ -0.42
Msh3-201ENSMUST00000022220 Lcmt1A0A0U1RNF2 332 aa12.42□□□□□ -0.42
Msh3-201ENSMUST00000022220 Ces1aE9PYP1 563 aa12.42□□□□□ -0.42
Msh3-201ENSMUST00000022220 Pdia6Q922R8 440 aaKnown RBP12.42□□□□□ -0.42
Msh3-201ENSMUST00000022220 Sh3tc1G3X9F6 1346 aa12.41□□□□□ -0.42
Msh3-201ENSMUST00000022220 Hdgfl1Q2VPR5 283 aa12.41□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms