RNA–Protein interactions for RNA: ENSMUST00000020258.9

Herc4-201, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Herc4, Length 3,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-201ENSMUST00000020258 Abcc12Q80WJ6 1366 aa13.19□□□□□ -0.3
Herc4-201ENSMUST00000020258 Zbtb7aO88939 569 aaKnown RBP13.18□□□□□ -0.3
Herc4-201ENSMUST00000020258 Ube2oQ6ZPJ3 1288 aa13.18□□□□□ -0.3
Herc4-201ENSMUST00000020258 Slfnl1Q8BHW9 410 aa13.18□□□□□ -0.3
Herc4-201ENSMUST00000020258 Pnpla2Q8BJ56 486 aa13.18□□□□□ -0.3
Herc4-201ENSMUST00000020258 Dnm3Q8BZ98 863 aa13.18□□□□□ -0.3
Herc4-201ENSMUST00000020258 Aox4Q3TYQ9 1336 aa13.18□□□□□ -0.3
Herc4-201ENSMUST00000020258 Anp32eP97822 260 aaKnown RBP13.18□□□□□ -0.3
Herc4-201ENSMUST00000020258 Itga6Q61739 1091 aa13.18□□□□□ -0.3
Herc4-201ENSMUST00000020258 Tsen34Q8BMZ5 316 aa13.18□□□□□ -0.3
Herc4-201ENSMUST00000020258 Tmem143Q8VD26 458 aa13.18□□□□□ -0.3
Herc4-201ENSMUST00000020258 Tubgcp2Q921G8 905 aa13.18□□□□□ -0.3
Herc4-201ENSMUST00000020258 Rgs9O54828 675 aa13.18□□□□□ -0.3
Herc4-201ENSMUST00000020258 Cfap69Q8BH53 942 aa13.18□□□□□ -0.3
Herc4-201ENSMUST00000020258 Rbm5Q91YE7 815 aaKnown RBP13.18□□□□□ -0.3
Herc4-201ENSMUST00000020258 NsmfQ99NF2 532 aa13.18□□□□□ -0.3
Herc4-201ENSMUST00000020258 WtapQ9ER69 396 aa13.18□□□□□ -0.3
Herc4-201ENSMUST00000020258 CoblQ5NBX1 1337 aaKnown RBP13.18□□□□□ -0.3
Herc4-201ENSMUST00000020258 Ugt1a6bK9J7B2 531 aa13.17□□□□□ -0.3
Herc4-201ENSMUST00000020258 Ifit1bl2Q3U687 466 aa13.17□□□□□ -0.3
Herc4-201ENSMUST00000020258 Ugt1a6Q64435 531 aa13.17□□□□□ -0.3
Herc4-201ENSMUST00000020258 Ugt1a7cQ6ZQM8 531 aa13.17□□□□□ -0.3
Herc4-201ENSMUST00000020258 Maats1Q8BRC6 783 aa13.17□□□□□ -0.3
Herc4-201ENSMUST00000020258 Cep89Q9CZX2 791 aa13.17□□□□□ -0.3
Herc4-201ENSMUST00000020258 Kcnh3Q9WVJ0 1095 aa13.17□□□□□ -0.3
Herc4-201ENSMUST00000020258 Tcof1O08784 1320 aaKnown RBP13.17□□□□□ -0.3
Herc4-201ENSMUST00000020258 MycbpapQ5SUV2 932 aa13.17□□□□□ -0.3
Herc4-201ENSMUST00000020258 Ctdp1Q7TSG2 960 aa13.17□□□□□ -0.3
Herc4-201ENSMUST00000020258 Ccdc12Q8R344 166 aaKnown RBP13.17□□□□□ -0.3
Herc4-201ENSMUST00000020258 Lonp2Q9DBN5 852 aa13.17□□□□□ -0.3
Herc4-201ENSMUST00000020258 Abcb6Q9DC29 842 aa13.17□□□□□ -0.3
Herc4-201ENSMUST00000020258 GmnnO88513 206 aa13.17□□□□□ -0.3
Herc4-201ENSMUST00000020258 Ccdc150Q8CDI7 1110 aa13.17□□□□□ -0.3
Herc4-201ENSMUST00000020258 Smc2Q8CG48 1191 aaKnown RBP13.17□□□□□ -0.3
Herc4-201ENSMUST00000020258 Znf131Q8K3J5 619 aa13.17□□□□□ -0.3
Herc4-201ENSMUST00000020258 Tlcd1Q99JT6 247 aa13.17□□□□□ -0.3
Herc4-201ENSMUST00000020258 Klhl10Q9D5V2 608 aa13.17□□□□□ -0.3
Herc4-201ENSMUST00000020258 Gm20425E9Q035 978 aaKnown RBP13.16□□□□□ -0.3
Herc4-201ENSMUST00000020258 SrprbP47758 269 aa13.16□□□□□ -0.3
Herc4-201ENSMUST00000020258 Sh3bp1P55194 680 aa13.16□□□□□ -0.3
Herc4-201ENSMUST00000020258 Ovgp1Q62010 721 aa13.16□□□□□ -0.3
Herc4-201ENSMUST00000020258 Znf532Q6NXK2 1036 aa13.16□□□□□ -0.3
Herc4-201ENSMUST00000020258 Nop2Q922K7 793 aaKnown RBP13.16□□□□□ -0.3
Herc4-201ENSMUST00000020258 Hip1rQ9JKY5 1068 aa13.16□□□□□ -0.3
Herc4-201ENSMUST00000020258 Rnf123Q5XPI3 1314 aa13.16□□□□□ -0.3
Herc4-201ENSMUST00000020258 Dhx8A2A4P0 1244 aaKnown RBP13.16□□□□□ -0.3
Herc4-201ENSMUST00000020258 Znhit6Q3UFB2 460 aaKnown RBP13.16□□□□□ -0.3
Herc4-201ENSMUST00000020258 Atp1a2Q6PIE5 1020 aa13.16□□□□□ -0.3
Herc4-201ENSMUST00000020258 Igsf3Q6ZQA6 1194 aa13.16□□□□□ -0.3
Herc4-201ENSMUST00000020258 Pold4Q9CWP8 107 aa13.16□□□□□ -0.3
Herc4-201ENSMUST00000020258 IntuQ059U7 942 aa13.16□□□□□ -0.3
Herc4-201ENSMUST00000020258 Gm28047Q3US59 414 aa13.16□□□□□ -0.3
Herc4-201ENSMUST00000020258 Dhx40Q6PE54 779 aaKnown RBP13.16□□□□□ -0.3
Herc4-201ENSMUST00000020258 Eaf2Q91ZD6 262 aa13.16□□□□□ -0.3
Herc4-201ENSMUST00000020258 Rbm43Q99J64 343 aa13.16□□□□□ -0.3
Herc4-201ENSMUST00000020258 Tns3Q5SSZ5 1440 aa13.16□□□□□ -0.3
Herc4-201ENSMUST00000020258 Jakmip2D3YXK0 820 aa13.15□□□□□ -0.3
Herc4-201ENSMUST00000020258 Ehmt1Q5DW34 1296 aa13.15□□□□□ -0.3
Herc4-201ENSMUST00000020258 Krt39Q6IFX4 482 aa13.15□□□□□ -0.3
Herc4-201ENSMUST00000020258 Rtn1Q8K0T0 780 aa13.15□□□□□ -0.3
Herc4-201ENSMUST00000020258 Ubac1Q8VDI7 409 aa13.15□□□□□ -0.3
Herc4-201ENSMUST00000020258 Bmp2kQ91Z96 1138 aa13.15□□□□□ -0.3
Herc4-201ENSMUST00000020258 Camta1A2A891 1682 aa13.15□□□□□ -0.3
Herc4-201ENSMUST00000020258 Itsn1Q9Z0R4 1714 aa13.15□□□□□ -0.3
Herc4-201ENSMUST00000020258 Mdh1bQ5F204 500 aa13.15□□□□□ -0.3
Herc4-201ENSMUST00000020258 Kcna6Q61923 529 aa13.15□□□□□ -0.3
Herc4-201ENSMUST00000020258 Triml1Q8BVP1 470 aa13.15□□□□□ -0.3
Herc4-201ENSMUST00000020258 Plcd3Q8K2J0 785 aa13.15□□□□□ -0.3
Herc4-201ENSMUST00000020258 Zbtb1Q91VL9 713 aa13.15□□□□□ -0.3
Herc4-201ENSMUST00000020258 Sorbs3Q9R1Z8 733 aa13.15□□□□□ -0.3
Herc4-201ENSMUST00000020258 Cul9Q80TT8 1865 aa13.15□□□□□ -0.3
Herc4-201ENSMUST00000020258 Pcdhb9E9Q5G2 828 aa13.15□□□□□ -0.3
Herc4-201ENSMUST00000020258 Dync1i1O88485 628 aa13.15□□□□□ -0.3
Herc4-201ENSMUST00000020258 Sptlc3Q8BG54 563 aa13.15□□□□□ -0.3
Herc4-201ENSMUST00000020258 Bola3Q8CEI1 110 aa13.15□□□□□ -0.3
Herc4-201ENSMUST00000020258 Ces1dQ8VCT4 565 aa13.15□□□□□ -0.3
Herc4-201ENSMUST00000020258 Gm5624F6ZZG8 207 aa13.14□□□□□ -0.31
Herc4-201ENSMUST00000020258 Riok1Q922Q2 567 aa13.14□□□□□ -0.31
Herc4-201ENSMUST00000020258 Krtap5-3Q9D226 196 aa13.14□□□□□ -0.31
Herc4-201ENSMUST00000020258 Kif1aP33173 1695 aa13.14□□□□□ -0.31
Herc4-201ENSMUST00000020258 Akr1c19G3X9Y6 323 aa13.14□□□□□ -0.31
Herc4-201ENSMUST00000020258 Nom1Q3UFM5 854 aaKnown RBP13.14□□□□□ -0.31
Herc4-201ENSMUST00000020258 Luc7l2Q7TNC4 392 aaKnown RBP13.14□□□□□ -0.31
Herc4-201ENSMUST00000020258 Ints5Q8CHT3 1018 aa13.14□□□□□ -0.31
Herc4-201ENSMUST00000020258 Inpp5bQ8K337 993 aa13.14□□□□□ -0.31
Herc4-201ENSMUST00000020258 Nod2Q8K3Z0 1020 aa13.14□□□□□ -0.31
Herc4-201ENSMUST00000020258 Mei1Q9D4I2 1268 aa13.14□□□□□ -0.31
Herc4-201ENSMUST00000020258 Plekho1Q9JIY0 408 aa13.14□□□□□ -0.31
Herc4-201ENSMUST00000020258 Pde4bB1AWC9 736 aa13.14□□□□□ -0.31
Herc4-201ENSMUST00000020258 Cyp3a57D3YYZ0 503 aa13.14□□□□□ -0.31
Herc4-201ENSMUST00000020258 Mapkapk5O54992 473 aa13.14□□□□□ -0.31
Herc4-201ENSMUST00000020258 Abcd1P48410 736 aa13.14□□□□□ -0.31
Herc4-201ENSMUST00000020258 Llgl2Q3TJ91 1027 aa13.14□□□□□ -0.31
Herc4-201ENSMUST00000020258 Kmt5bQ3U8K7 883 aa13.14□□□□□ -0.31
Herc4-201ENSMUST00000020258 Cdcp1Q5U462 833 aa13.14□□□□□ -0.31
Herc4-201ENSMUST00000020258 Cyp4f39Q8BGU0 532 aa13.14□□□□□ -0.31
Herc4-201ENSMUST00000020258 Trim29Q8R2Q0 587 aa13.14□□□□□ -0.31
Herc4-201ENSMUST00000020258 Zeb2Q9R0G7 1215 aa13.14□□□□□ -0.31
Herc4-201ENSMUST00000020258 Gm3409A0A0G2JE67 319 aa13.13□□□□□ -0.31
Herc4-201ENSMUST00000020258 Ttll12Q3UDE2 639 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 63 ms