RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Ssfa2Q922B9 1252 aa13.8□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Kidins220E9Q9B7 1793 aa13.8□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Ugt1a5B2RT14 529 aa13.79□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Parp2O88554 559 aa13.79□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Sptlc2P97363 560 aaKnown RBP13.79□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Lrrc36Q3V0M2 755 aa13.79□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Nlrp2Q4PLS0 1046 aaKnown RBP13.79□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Tfcp2Q9ERA0 502 aa13.79□□□□□ -0.2
Ctr9-201ENSMUST00000005749 4930407I10RikD3Z5T8 1512 aa13.79□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Hecw2Q6I6G8 1578 aa13.79□□□□□ -0.2
Ctr9-201ENSMUST00000005749 CemipQ8BI06 1361 aa13.79□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Sema6bO54951 886 aa13.79□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Utp18Q5SSI6 552 aaKnown RBP13.79□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Ripor2Q80U16 1078 aa13.79□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Acot9Q9R0X4 439 aaKnown RBP13.79□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Dynll1P63168 89 aa13.79□□□□□ -0.2
Ctr9-201ENSMUST00000005749 NpeppsQ11011 920 aa13.79□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Slu7Q8BHJ9 585 aa13.79□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Knop1Q9Z2Q2 478 aaKnown RBP13.79□□□□□ -0.2
Ctr9-201ENSMUST00000005749 PtprmP28828 1452 aa13.79□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Nfxl1E9Q8I7 918 aaKnown RBP13.78□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Cc2d1bQ8BRN9 848 aa13.78□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Pcdhb22Q91XZ8 794 aa13.78□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Abcc12Q80WJ6 1366 aa13.78□□□□□ -0.2
Ctr9-201ENSMUST00000005749 ImpactO55091 318 aa13.78□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Pls1Q3V0K9 630 aa13.78□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Cdc42bpgQ80UW5 1551 aa13.78□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Pip4k2aO70172 405 aa13.78□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Znhit6Q3UFB2 460 aaKnown RBP13.78□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Tmco3Q8BH01 678 aa13.78□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Mettl5Q8K1A0 209 aa13.78□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Sept14Q9DA97 430 aa13.78□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Palm3A2TJV2 734 aa13.78□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Znf667Q2TL60 609 aa13.78□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Haus6Q6NV99 933 aaKnown RBP13.78□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Asap2Q7SIG6 958 aa13.78□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Naa30Q8CES0 364 aa13.78□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Ipo4Q8VI75 1082 aa13.78□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Mtmr2Q9Z2D1 643 aa13.78□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Cul7Q8VE73 1689 aa13.78□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Tlr8P58682 1032 aa13.77□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Trim25Q61510 634 aaKnown RBP13.77□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Spire2Q8K1S6 718 aa13.77□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Slc18a1Q8R090 521 aa13.77□□□□□ -0.2
Ctr9-201ENSMUST00000005749 Gm4758L7N258 96 aa13.77□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Ints5Q8CHT3 1018 aa13.77□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Frat2Q8K025 231 aa13.77□□□□□ -0.21
Ctr9-201ENSMUST00000005749 IcoslgQ9JHJ8 322 aa13.77□□□□□ -0.21
Ctr9-201ENSMUST00000005749 RabggtaQ9JHK4 567 aa13.77□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Gemin5Q8BX17 1502 aaKnown RBP13.77□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Eddm13E9Q7F5 164 aa13.77□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Lrrfip1Q3UZ39 729 aaKnown RBP13.77□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Pex1Q5BL07 1284 aa13.77□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Taok2Q6ZQ29 1240 aa13.77□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Ercc6lQ8BHK9 1240 aa13.77□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Nxf1Q99JX7 618 aaKnown RBP13.77□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Arpp21Q9DCB4 807 aa13.77□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Osbpl5Q9ER64 874 aa13.77□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Rreb1Q3UH06 1700 aaKnown RBP13.76□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Ddx10Q80Y44 875 aaKnown RBP13.76□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Tpcn2Q8BWC0 731 aa13.76□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Gpcpd1Q8C0L9 675 aa13.76□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Ltb4r2Q9JJL9 360 aa13.76□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Rcan3Q9JKK0 239 aa13.76□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Rps6ka4Q9Z2B9 773 aa13.76□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Fam184aE9PW83 1143 aa13.76□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Atp2b1G5E829 1220 aa13.76□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Rbm15bQ6PHZ5 887 aaKnown RBP13.76□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Vmn1r199Q8R280 367 aa13.76□□□□□ -0.21
Ctr9-201ENSMUST00000005749 AdpgkQ8VDL4 496 aa13.76□□□□□ -0.21
Ctr9-201ENSMUST00000005749 CtcfQ61164 736 aaKnown RBP13.76□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Atp1a3Q6PIC6 1013 aa13.76□□□□□ -0.21
Ctr9-201ENSMUST00000005749 MypnQ5DTJ9 1315 aa13.76□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Cacnb3P54285 484 aa13.76□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Sh3d21Q7TSG5 549 aa13.76□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Cyp4f39Q8BGU0 532 aa13.76□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Ano2Q8CFW1 1002 aa13.76□□□□□ -0.21
Ctr9-201ENSMUST00000005749 SltmQ8CH25 1031 aaKnown RBP13.76□□□□□ -0.21
Ctr9-201ENSMUST00000005749 FliiQ9JJ28 1271 aa13.76□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Aox2Q5SGK3 1345 aa13.75□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Cpb1B2RS76 415 aa13.75□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Gtpbp6Q3U6U5 514 aa13.75□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Asic1Q6NXK8 526 aa13.75□□□□□ -0.21
Ctr9-201ENSMUST00000005749 CenpqQ9CPQ5 267 aa13.75□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Dnajb6O54946 365 aa13.75□□□□□ -0.21
Ctr9-201ENSMUST00000005749 GabrdP22933 449 aa13.75□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Stat5bP42232 786 aa13.75□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Eya3P97480 510 aa13.75□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Ssrp1Q08943 708 aaKnown RBP13.75□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Hs2st1Q8R3H7 356 aa13.75□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Brms1Q99N20 246 aa13.75□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Zkscan7E9PVW1 718 aa13.75□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Usp53P15975 1069 aa13.75□□□□□ -0.21
Ctr9-201ENSMUST00000005749 KhnynQ80U38 671 aa13.75□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Bst2Q8R2Q8 172 aa13.75□□□□□ -0.21
Ctr9-201ENSMUST00000005749 NapaQ9DB05 295 aa13.75□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Cabp5Q9JLK3 173 aa13.75□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Il7P10168 154 aa13.74□□□□□ -0.21
Ctr9-201ENSMUST00000005749 1700013D24RikQ0P521 120 aa13.74□□□□□ -0.21
Ctr9-201ENSMUST00000005749 Taf3Q5HZG4 932 aa13.74□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 11.3 ms