RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	AKIRIN2	Q53H80	203 aa		11.72	□□□□□ -0.53
PHGDH-231	ENST00000641939	TMEM69	Q5SWH9	247 aa		11.72	□□□□□ -0.53
PHGDH-231	ENST00000641939	FOXB2	Q5VYV0	432 aa		11.72	□□□□□ -0.53
PHGDH-231	ENST00000641939	REC114	Q7Z4M0	266 aa		11.72	□□□□□ -0.53
PHGDH-231	ENST00000641939	ZNF491	Q8N8L2	437 aa		11.72	□□□□□ -0.53
PHGDH-231	ENST00000641939	UBE2E2	Q96LR5	201 aa		11.72	□□□□□ -0.53
PHGDH-231	ENST00000641939	FAM103A1	Q9BTL3	118 aa	Known RBP	11.72	□□□□□ -0.53
PHGDH-231	ENST00000641939	FOXA2	Q9Y261	457 aa	Predicted RBP	11.72	□□□□□ -0.53
PHGDH-231	ENST00000641939	RBMX2	Q9Y388	322 aa	Known RBP	11.72	□□□□□ -0.53
PHGDH-231	ENST00000641939	SRRM4	A7MD48	611 aa	Known RBP	11.71	□□□□□ -0.53
PHGDH-231	ENST00000641939	CRYZL1	O95825	349 aa		11.71	□□□□□ -0.53
PHGDH-231	ENST00000641939	IGLV2-14	P01704	120 aa		11.71	□□□□□ -0.53
PHGDH-231	ENST00000641939	CRYGB	P07316	175 aa		11.71	□□□□□ -0.53
PHGDH-231	ENST00000641939	TAS2R20	P59543	309 aa		11.71	□□□□□ -0.53
PHGDH-231	ENST00000641939	KIAA0141	Q14154	515 aa	Predicted RBP	11.71	□□□□□ -0.53
PHGDH-231	ENST00000641939	FXYD3	Q14802	87 aa		11.71	□□□□□ -0.53
PHGDH-231	ENST00000641939	ACTBL2	Q562R1	376 aa		11.71	□□□□□ -0.53
PHGDH-231	ENST00000641939	UNQ5815/PRO19632	Q6UWF5	114 aa		11.71	□□□□□ -0.53
PHGDH-231	ENST00000641939	ANKRD13B	Q86YJ7	626 aa		11.71	□□□□□ -0.53
PHGDH-231	ENST00000641939	LFNG	Q8NES3	379 aa		11.71	□□□□□ -0.53
PHGDH-231	ENST00000641939	OSR1	Q8TAX0	266 aa	Predicted RBP	11.71	□□□□□ -0.53
PHGDH-231	ENST00000641939	ARPC1A	Q92747	370 aa		11.71	□□□□□ -0.53
PHGDH-231	ENST00000641939	SNAPC3	Q92966	411 aa		11.71	□□□□□ -0.53
PHGDH-231	ENST00000641939	MRPS26	Q9BYN8	205 aa	Known RBP	11.71	□□□□□ -0.53
PHGDH-231	ENST00000641939	GPR61	Q9BZJ8	451 aa		11.71	□□□□□ -0.53
PHGDH-231	ENST00000641939	VSIG4	Q9Y279	399 aa		11.71	□□□□□ -0.53
PHGDH-231	ENST00000641939	MEIS3P1	A6NDR6	274 aa		11.7	□□□□□ -0.54
PHGDH-231	ENST00000641939	ARPC1B	O15143	372 aa	Known RBP	11.7	□□□□□ -0.54
PHGDH-231	ENST00000641939	SOX15	O60248	233 aa		11.7	□□□□□ -0.54
PHGDH-231	ENST00000641939	GABARAP	O95166	117 aa		11.7	□□□□□ -0.54
PHGDH-231	ENST00000641939	CNIH1	O95406	144 aa		11.7	□□□□□ -0.54
PHGDH-231	ENST00000641939	FCER2	P06734	321 aa		11.7	□□□□□ -0.54
PHGDH-231	ENST00000641939	AADAC	P22760	399 aa		11.7	□□□□□ -0.54
PHGDH-231	ENST00000641939	FCGR2C	P31995	323 aa		11.7	□□□□□ -0.54
PHGDH-231	ENST00000641939	RAB25	P57735	213 aa		11.7	□□□□□ -0.54
PHGDH-231	ENST00000641939	GNB1	P62873	340 aa		11.7	□□□□□ -0.54
PHGDH-231	ENST00000641939	PJVK	Q0ZLH3	352 aa		11.7	□□□□□ -0.54
PHGDH-231	ENST00000641939	PYHIN1	Q6K0P9	492 aa		11.7	□□□□□ -0.54
PHGDH-231	ENST00000641939	KCTD9	Q7L273	389 aa		11.7	□□□□□ -0.54
PHGDH-231	ENST00000641939	OR5AP2	Q8NGF4	316 aa		11.7	□□□□□ -0.54
PHGDH-231	ENST00000641939	OR5M8	Q8NGP6	311 aa		11.7	□□□□□ -0.54
PHGDH-231	ENST00000641939	GRPEL2	Q8TAA5	225 aa		11.7	□□□□□ -0.54
PHGDH-231	ENST00000641939	HSD17B10	Q99714	261 aa	Known RBP	11.7	□□□□□ -0.54
PHGDH-231	ENST00000641939	MCRIP2	Q9BUT9	160 aa	Known RBP	11.7	□□□□□ -0.54
PHGDH-231	ENST00000641939	NAA50	Q9GZZ1	169 aa	Known RBP	11.7	□□□□□ -0.54
PHGDH-231	ENST00000641939	GNB4	Q9HAV0	340 aa		11.7	□□□□□ -0.54
PHGDH-231	ENST00000641939	IFT46	Q9NQC8	304 aa		11.7	□□□□□ -0.54
PHGDH-231	ENST00000641939	COMMD3	Q9UBI1	195 aa		11.7	□□□□□ -0.54
PHGDH-231	ENST00000641939	PRELID3B	Q9Y3B1	194 aa		11.7	□□□□□ -0.54
PHGDH-231	ENST00000641939		I3L521	148 aa		11.69	□□□□□ -0.54
PHGDH-231	ENST00000641939	FCGR3B	O75015	233 aa		11.69	□□□□□ -0.54
PHGDH-231	ENST00000641939	APOA1	P02647	267 aa		11.69	□□□□□ -0.54
PHGDH-231	ENST00000641939	EIF4E	P06730	217 aa	Known RBP	11.69	□□□□□ -0.54
PHGDH-231	ENST00000641939	RORC	P51449	518 aa		11.69	□□□□□ -0.54
PHGDH-231	ENST00000641939	UBE2K	P61086	200 aa		11.69	□□□□□ -0.54
PHGDH-231	ENST00000641939	RPL30	P62888	115 aa	Known RBP	11.69	□□□□□ -0.54
PHGDH-231	ENST00000641939	SSBP2	P81877	361 aa	Predicted RBP	11.69	□□□□□ -0.54
PHGDH-231	ENST00000641939	RUNX1	Q01196	453 aa		11.69	□□□□□ -0.54
PHGDH-231	ENST00000641939	FHL3	Q13643	280 aa		11.69	□□□□□ -0.54
PHGDH-231	ENST00000641939	CTF1	Q16619	201 aa		11.69	□□□□□ -0.54
PHGDH-231	ENST00000641939	VMA21	Q3ZAQ7	101 aa		11.69	□□□□□ -0.54
PHGDH-231	ENST00000641939	OVCH2	Q7RTZ1	564 aa		11.69	□□□□□ -0.54
PHGDH-231	ENST00000641939	TEX45	Q8NA69	505 aa		11.69	□□□□□ -0.54
PHGDH-231	ENST00000641939	OR11H1	Q8NG94	326 aa		11.69	□□□□□ -0.54
PHGDH-231	ENST00000641939	CASTOR1	Q8WTX7	329 aa		11.69	□□□□□ -0.54
PHGDH-231	ENST00000641939	ACOT12	Q8WYK0	555 aa		11.69	□□□□□ -0.54
PHGDH-231	ENST00000641939	CMTM3	Q96MX0	182 aa		11.69	□□□□□ -0.54
PHGDH-231	ENST00000641939	DCUN1D5	Q9BTE7	237 aa		11.69	□□□□□ -0.54
PHGDH-231	ENST00000641939	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	11.69	□□□□□ -0.54
PHGDH-231	ENST00000641939	MRPS7	Q9Y2R9	242 aa	Known RBP	11.69	□□□□□ -0.54
PHGDH-231	ENST00000641939	SMIM31	A0A1B0GVY4	71 aa		11.68	□□□□□ -0.54
PHGDH-231	ENST00000641939	PPY	P01298	95 aa		11.68	□□□□□ -0.54
PHGDH-231	ENST00000641939	CD40LG	P29965	261 aa		11.68	□□□□□ -0.54
PHGDH-231	ENST00000641939	PRSS3	P35030	304 aa		11.68	□□□□□ -0.54
PHGDH-231	ENST00000641939	EIF4EBP1	Q13541	118 aa	Predicted RBP	11.68	□□□□□ -0.54
PHGDH-231	ENST00000641939	CDK10	Q15131	360 aa		11.68	□□□□□ -0.54
PHGDH-231	ENST00000641939	MSMO1	Q15800	293 aa		11.68	□□□□□ -0.54
PHGDH-231	ENST00000641939	OR2B11	Q5JQS5	317 aa		11.68	□□□□□ -0.54
PHGDH-231	ENST00000641939	GPR107	Q5VW38	600 aa		11.68	□□□□□ -0.54
PHGDH-231	ENST00000641939	SECTM1	Q8WVN6	248 aa		11.68	□□□□□ -0.54
PHGDH-231	ENST00000641939	TCTEX1D2	Q8WW35	142 aa		11.68	□□□□□ -0.54
PHGDH-231	ENST00000641939	OR5B12	Q96R08	314 aa		11.68	□□□□□ -0.54
PHGDH-231	ENST00000641939	ANAPC10	Q9UM13	185 aa		11.68	□□□□□ -0.54
PHGDH-231	ENST00000641939	ALDH3B2	P48448	385 aa		11.67	□□□□□ -0.54
PHGDH-231	ENST00000641939	PRSS8	Q16651	343 aa		11.67	□□□□□ -0.54
PHGDH-231	ENST00000641939	MRGPRG-AS1	Q2M3A8	158 aa		11.67	□□□□□ -0.54
PHGDH-231	ENST00000641939	ZNF66	Q6ZN08	573 aa		11.67	□□□□□ -0.54
PHGDH-231	ENST00000641939	IDO2	Q6ZQW0	420 aa		11.67	□□□□□ -0.54
PHGDH-231	ENST00000641939	GPR141	Q7Z602	305 aa		11.67	□□□□□ -0.54
PHGDH-231	ENST00000641939	MFSD4A	Q8N468	514 aa		11.67	□□□□□ -0.54
PHGDH-231	ENST00000641939	OR1N2	Q8NGR9	330 aa		11.67	□□□□□ -0.54
PHGDH-231	ENST00000641939	OR4S2	Q8NH73	311 aa		11.67	□□□□□ -0.54
PHGDH-231	ENST00000641939	GIMAP1	Q8WWP7	306 aa		11.67	□□□□□ -0.54
PHGDH-231	ENST00000641939	DPF1	Q92782	380 aa		11.67	□□□□□ -0.54
PHGDH-231	ENST00000641939	TMEM68	Q96MH6	324 aa		11.67	□□□□□ -0.54
PHGDH-231	ENST00000641939	MS4A10	Q96PG2	267 aa		11.67	□□□□□ -0.54
PHGDH-231	ENST00000641939	SLA2	Q9H6Q3	261 aa		11.67	□□□□□ -0.54
PHGDH-231	ENST00000641939	CCL28	Q9NRJ3	127 aa		11.67	□□□□□ -0.54
PHGDH-231	ENST00000641939	TAS2R8	Q9NYW2	309 aa		11.67	□□□□□ -0.54
PHGDH-231	ENST00000641939	SORL1	Q92673	2214 aa		11.66	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms