RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-229	ENST00000641891	ZNF787	Q6DD87	383 aa		14.02	□□□□□ -0.17
PHGDH-229	ENST00000641891	ZGRF1	Q86YA3	2104 aa		14.02	□□□□□ -0.17
PHGDH-229	ENST00000641891	PARD6G	Q9BYG4	376 aa	Predicted RBP	14.02	□□□□□ -0.17
PHGDH-229	ENST00000641891	HIPK2	Q9H2X6	1198 aa		14.02	□□□□□ -0.17
PHGDH-229	ENST00000641891	SAV1	Q9H4B6	383 aa	Predicted RBP	14.02	□□□□□ -0.17
PHGDH-229	ENST00000641891	SMDT1	Q9H4I9	107 aa		14.02	□□□□□ -0.17
PHGDH-229	ENST00000641891	APC2	O95996	2303 aa		14.01	□□□□□ -0.17
PHGDH-229	ENST00000641891	DOCK11	Q5JSL3	2073 aa		14.01	□□□□□ -0.17
PHGDH-229	ENST00000641891	TRAV1-1	A0A0B4J248	108 aa		14.01	□□□□□ -0.17
PHGDH-229	ENST00000641891	IGKV1D-33	P01593	117 aa		14.01	□□□□□ -0.17
PHGDH-229	ENST00000641891	IGKV1-33	P01594	117 aa		14.01	□□□□□ -0.17
PHGDH-229	ENST00000641891	ARG1	P05089	322 aa		14.01	□□□□□ -0.17
PHGDH-229	ENST00000641891	TNFSF4	P23510	183 aa		14.01	□□□□□ -0.17
PHGDH-229	ENST00000641891	RAB2A	P61019	212 aa		14.01	□□□□□ -0.17
PHGDH-229	ENST00000641891	TFF3	Q07654	80 aa		14.01	□□□□□ -0.17
PHGDH-229	ENST00000641891	ADIPOQ	Q15848	244 aa		14.01	□□□□□ -0.17
PHGDH-229	ENST00000641891	TMEM41B	Q5BJD5	291 aa		14.01	□□□□□ -0.17
PHGDH-229	ENST00000641891	CT45A1	Q5HYN5	189 aa		14.01	□□□□□ -0.17
PHGDH-229	ENST00000641891	AVPI1	Q5T686	147 aa		14.01	□□□□□ -0.17
PHGDH-229	ENST00000641891	CT45A3	Q8NHU0	189 aa		14.01	□□□□□ -0.17
PHGDH-229	ENST00000641891	CUL9	Q8IWT3	2517 aa		14.01	□□□□□ -0.17
PHGDH-229	ENST00000641891	KBTBD11-OT1	A0A1B0GTJ5	212 aa		14	□□□□□ -0.17
PHGDH-229	ENST00000641891	LOC102723971	A0A1B0GUV8	181 aa		14	□□□□□ -0.17
PHGDH-229	ENST00000641891		A0A1W2PPE2	198 aa		14	□□□□□ -0.17
PHGDH-229	ENST00000641891		A0A1W2PPH5	198 aa		14	□□□□□ -0.17
PHGDH-229	ENST00000641891	HPRT1	P00492	218 aa		14	□□□□□ -0.17
PHGDH-229	ENST00000641891	OR4A8	P0C604	315 aa		14	□□□□□ -0.17
PHGDH-229	ENST00000641891	PRAMEF5	Q5TYX0	476 aa		14	□□□□□ -0.17
PHGDH-229	ENST00000641891	C15orf54	Q8N8G6	183 aa		14	□□□□□ -0.17
PHGDH-229	ENST00000641891	KDF1	Q8NAX2	398 aa	Predicted RBP	14	□□□□□ -0.17
PHGDH-229	ENST00000641891	HIST1H2BA	Q96A08	127 aa		14	□□□□□ -0.17
PHGDH-229	ENST00000641891	GFOD1	Q9NXC2	390 aa		14	□□□□□ -0.17
PHGDH-229	ENST00000641891	ELOVL5	Q9NYP7	299 aa		14	□□□□□ -0.17
PHGDH-229	ENST00000641891	PRELID3B	Q9Y3B1	194 aa		14	□□□□□ -0.17
PHGDH-229	ENST00000641891	PLCE1	Q9P212	2302 aa		14	□□□□□ -0.17
PHGDH-229	ENST00000641891	DYSF	O75923	2080 aa		14	□□□□□ -0.17
PHGDH-229	ENST00000641891	DSCAML1	Q8TD84	2053 aa		14	□□□□□ -0.17
PHGDH-229	ENST00000641891	TRAV3	A0A0B4J244	114 aa		14	□□□□□ -0.17
PHGDH-229	ENST00000641891	ZFP92	A6NM28	416 aa		14	□□□□□ -0.17
PHGDH-229	ENST00000641891	MMP23A	O75900	390 aa		14	□□□□□ -0.17
PHGDH-229	ENST00000641891	HSPB1	P04792	205 aa	Known RBP	14	□□□□□ -0.17
PHGDH-229	ENST00000641891	SERF2	P84101	59 aa		14	□□□□□ -0.17
PHGDH-229	ENST00000641891	ADAM5	Q6NVV9	412 aa		14	□□□□□ -0.17
PHGDH-229	ENST00000641891	ACSM6	Q6P461	480 aa		14	□□□□□ -0.17
PHGDH-229	ENST00000641891	C2CD4C	Q8TF44	421 aa		14	□□□□□ -0.17
PHGDH-229	ENST00000641891	TMEM147	Q9BVK8	224 aa		14	□□□□□ -0.17
PHGDH-229	ENST00000641891	SAA2-SAA4	A0A096LPE2	208 aa		13.99	□□□□□ -0.17
PHGDH-229	ENST00000641891	TRGV10	A0A0A0MS01	117 aa		13.99	□□□□□ -0.17
PHGDH-229	ENST00000641891		H3BQ15	152 aa		13.99	□□□□□ -0.17
PHGDH-229	ENST00000641891	IFNA17	P01571	189 aa		13.99	□□□□□ -0.17
PHGDH-229	ENST00000641891	SAA2	P0DJI9	122 aa	Predicted RBP	13.99	□□□□□ -0.17
PHGDH-229	ENST00000641891	FGF7	P21781	194 aa		13.99	□□□□□ -0.17
PHGDH-229	ENST00000641891	PTAFR	P25105	342 aa		13.99	□□□□□ -0.17
PHGDH-229	ENST00000641891	GNG10	P50151	68 aa		13.99	□□□□□ -0.17
PHGDH-229	ENST00000641891	RHEB	Q15382	184 aa		13.99	□□□□□ -0.17
PHGDH-229	ENST00000641891	ZNF788	Q6ZQV5	615 aa		13.99	□□□□□ -0.17
PHGDH-229	ENST00000641891	OR10P1	Q8NGE3	313 aa		13.99	□□□□□ -0.17
PHGDH-229	ENST00000641891	MBD3L1	Q8WWY6	194 aa		13.99	□□□□□ -0.17
PHGDH-229	ENST00000641891	ZNF835	Q9Y2P0	537 aa		13.99	□□□□□ -0.17
PHGDH-229	ENST00000641891	TANC2	Q9HCD6	1990 aa		13.99	□□□□□ -0.17
PHGDH-229	ENST00000641891	ACACA	Q13085	2346 aa		13.99	□□□□□ -0.17
PHGDH-229	ENST00000641891	C15orf62	A8K5M9	175 aa		13.99	□□□□□ -0.17
PHGDH-229	ENST00000641891	DDB2	Q92466	427 aa		13.99	□□□□□ -0.17
PHGDH-229	ENST00000641891	CIB3	Q96Q77	187 aa	Predicted RBP	13.99	□□□□□ -0.17
PHGDH-229	ENST00000641891	S1PR3	Q99500	378 aa		13.99	□□□□□ -0.17
PHGDH-229	ENST00000641891	JKAMP	Q9P055	326 aa		13.99	□□□□□ -0.17
PHGDH-229	ENST00000641891	HCFC1	P51610	2035 aa		13.98	□□□□□ -0.17
PHGDH-229	ENST00000641891	HMGB3	O15347	200 aa	Known RBP	13.98	□□□□□ -0.17
PHGDH-229	ENST00000641891	FAM87A	P0C7U9	286 aa		13.98	□□□□□ -0.17
PHGDH-229	ENST00000641891	IRF2	P14316	349 aa		13.98	□□□□□ -0.17
PHGDH-229	ENST00000641891	ERVFRD-1	P60508	538 aa		13.98	□□□□□ -0.17
PHGDH-229	ENST00000641891	KHDC3L	Q587J8	217 aa		13.98	□□□□□ -0.17
PHGDH-229	ENST00000641891	RPP25L	Q8N5L8	163 aa	Known RBP	13.98	□□□□□ -0.17
PHGDH-229	ENST00000641891	ZNRD1	Q9P1U0	126 aa		13.98	□□□□□ -0.17
PHGDH-229	ENST00000641891	PTPRZ1	P23471	2315 aa	Predicted RBP	13.98	□□□□□ -0.17
PHGDH-229	ENST00000641891	PIEZO2	Q9H5I5	2752 aa		13.98	□□□□□ -0.17
PHGDH-229	ENST00000641891	MAP1LC3B2	A6NCE7	125 aa		13.98	□□□□□ -0.17
PHGDH-229	ENST00000641891		K7ENP7	123 aa		13.98	□□□□□ -0.17
PHGDH-229	ENST00000641891	TSPAN9	O75954	239 aa		13.98	□□□□□ -0.17
PHGDH-229	ENST00000641891	PAX6	P26367	422 aa		13.98	□□□□□ -0.17
PHGDH-229	ENST00000641891	RAB13	P51153	203 aa		13.98	□□□□□ -0.17
PHGDH-229	ENST00000641891	ZNF429	Q86V71	674 aa		13.98	□□□□□ -0.17
PHGDH-229	ENST00000641891	OR4A16	Q8NH70	328 aa		13.98	□□□□□ -0.17
PHGDH-229	ENST00000641891	RAB39B	Q96DA2	213 aa		13.98	□□□□□ -0.17
PHGDH-229	ENST00000641891	MAP1LC3B	Q9GZQ8	125 aa		13.98	□□□□□ -0.17
PHGDH-229	ENST00000641891	NCOR1P1	Q9H4R4	102 aa		13.98	□□□□□ -0.17
PHGDH-229	ENST00000641891	TIMM9	Q9Y5J7	89 aa		13.98	□□□□□ -0.17
PHGDH-229	ENST00000641891	C17orf100	A8MU93	164 aa		13.97	□□□□□ -0.17
PHGDH-229	ENST00000641891	BCL2	P10415	239 aa		13.97	□□□□□ -0.17
PHGDH-229	ENST00000641891	ATP6V1F	Q16864	119 aa		13.97	□□□□□ -0.17
PHGDH-229	ENST00000641891	TEX36	Q5VZQ5	186 aa		13.97	□□□□□ -0.17
PHGDH-229	ENST00000641891	LYG1	Q8N1E2	194 aa		13.97	□□□□□ -0.17
PHGDH-229	ENST00000641891	PINX1	Q96BK5	328 aa	Known RBP	13.97	□□□□□ -0.17
PHGDH-229	ENST00000641891	ZNF251	Q9BRH9	671 aa		13.97	□□□□□ -0.17
PHGDH-229	ENST00000641891	EGLN1	Q9GZT9	426 aa		13.97	□□□□□ -0.17
PHGDH-229	ENST00000641891	TMEM140	Q9NV12	185 aa		13.97	□□□□□ -0.17
PHGDH-229	ENST00000641891	hCG_1809904	A0A1W2PP81	198 aa		13.96	□□□□□ -0.17
PHGDH-229	ENST00000641891		A0A1W2PR64	198 aa		13.96	□□□□□ -0.17
PHGDH-229	ENST00000641891		A0A1W2PRV1	198 aa		13.96	□□□□□ -0.17
PHGDH-229	ENST00000641891	TMPRSS2	O15393	492 aa		13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms