RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 LIAT1Q6ZQX7 453 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 ODF3L1Q8IXM7 274 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 SIGLECL1Q8N7X8 197 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 DMBX1Q8NFW5 382 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 CASTOR1Q8WTX7 329 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 ZFAND2BQ8WV99 257 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 RRNAD1Q96FB5 475 aaKnown RBP10.46□□□□□ -0.73
PHGDH-218ENST00000641491 HARBI1Q96MB7 349 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 MEGF9Q9H1U4 602 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 C5orf66Q9H5L9 145 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 TLN2Q9Y4G6 2542 aa10.45□□□□□ -0.74
PHGDH-218ENST00000641491 A0A1W2PPI3 338 aa10.45□□□□□ -0.74
PHGDH-218ENST00000641491 CRYM-AS1A6NIL9 109 aa10.45□□□□□ -0.74
PHGDH-218ENST00000641491 H0YJW9 148 aa10.45□□□□□ -0.74
PHGDH-218ENST00000641491 RBMXL2O75526 392 aaKnown RBP10.45□□□□□ -0.74
PHGDH-218ENST00000641491 HPRT1P00492 218 aa10.45□□□□□ -0.74
PHGDH-218ENST00000641491 RPA2P15927 270 aa10.45□□□□□ -0.74
PHGDH-218ENST00000641491 ANXA7P20073 488 aaKnown RBP10.45□□□□□ -0.74
PHGDH-218ENST00000641491 BTCP35070 178 aa10.45□□□□□ -0.74
PHGDH-218ENST00000641491 DIAPH2-AS1Q14236 149 aa10.45□□□□□ -0.74
PHGDH-218ENST00000641491 HNF4GQ14541 408 aa10.45□□□□□ -0.74
PHGDH-218ENST00000641491 MMDQ15546 238 aa10.45□□□□□ -0.74
PHGDH-218ENST00000641491 LY6EQ16553 131 aa10.45□□□□□ -0.74
PHGDH-218ENST00000641491 SLC25A42Q86VD7 318 aa10.45□□□□□ -0.74
PHGDH-218ENST00000641491 LDLRAD3Q86YD5 345 aa10.45□□□□□ -0.74
PHGDH-218ENST00000641491 BCL6BQ8N143 479 aaPredicted RBP10.45□□□□□ -0.74
PHGDH-218ENST00000641491 VSTM2AQ8TAG5 236 aa10.45□□□□□ -0.74
PHGDH-218ENST00000641491 OSR1Q8TAX0 266 aaPredicted RBP10.45□□□□□ -0.74
PHGDH-218ENST00000641491 C17orf50Q8WW18 174 aa10.45□□□□□ -0.74
PHGDH-218ENST00000641491 ST6GALNAC6Q969X2 333 aa10.45□□□□□ -0.74
PHGDH-218ENST00000641491 PHB2Q99623 299 aa10.45□□□□□ -0.74
PHGDH-218ENST00000641491 BEX1Q9HBH7 125 aa10.45□□□□□ -0.74
PHGDH-218ENST00000641491 FLVCR2Q9UPI3 526 aa10.45□□□□□ -0.74
PHGDH-218ENST00000641491 ARHGAP32A7KAX9 2087 aa10.45□□□□□ -0.74
PHGDH-218ENST00000641491 ABCA1O95477 2261 aa10.44□□□□□ -0.74
PHGDH-218ENST00000641491 WNK2Q9Y3S1 2297 aa10.44□□□□□ -0.74
PHGDH-218ENST00000641491 MDFIC2A0A1B0GVS7 189 aa10.44□□□□□ -0.74
PHGDH-218ENST00000641491 TCF21O43680 179 aa10.44□□□□□ -0.74
PHGDH-218ENST00000641491 CRLF1O75462 422 aa10.44□□□□□ -0.74
PHGDH-218ENST00000641491 ACTL6BO94805 426 aa10.44□□□□□ -0.74
PHGDH-218ENST00000641491 CRYBA1P05813 215 aa10.44□□□□□ -0.74
PHGDH-218ENST00000641491 OR5AC1P0C628 307 aa10.44□□□□□ -0.74
PHGDH-218ENST00000641491 OR4E1P0C645 316 aa10.44□□□□□ -0.74
PHGDH-218ENST00000641491 DYNLT3P51808 116 aa10.44□□□□□ -0.74
PHGDH-218ENST00000641491 SLC9A3R2Q15599 337 aa10.44□□□□□ -0.74
PHGDH-218ENST00000641491 THNSL2Q86YJ6 484 aa10.44□□□□□ -0.74
PHGDH-218ENST00000641491 LGI3Q8N145 548 aa10.44□□□□□ -0.74
PHGDH-218ENST00000641491 ZNF383Q8NA42 475 aa10.44□□□□□ -0.74
PHGDH-218ENST00000641491 UXS1Q8NBZ7 420 aa10.44□□□□□ -0.74
PHGDH-218ENST00000641491 ADAD2Q8NCV1 583 aaKnown RBP10.44□□□□□ -0.74
PHGDH-218ENST00000641491 DUSP18Q8NEJ0 188 aa10.44□□□□□ -0.74
PHGDH-218ENST00000641491 OR8H1Q8NGG4 311 aa10.44□□□□□ -0.74
PHGDH-218ENST00000641491 OR5AN1Q8NGI8 311 aa10.44□□□□□ -0.74
PHGDH-218ENST00000641491 RNF5Q99942 180 aa10.44□□□□□ -0.74
PHGDH-218ENST00000641491 RASL11BQ9BPW5 248 aa10.44□□□□□ -0.74
PHGDH-218ENST00000641491 RTBDNQ9BSG5 229 aaPredicted RBP10.44□□□□□ -0.74
PHGDH-218ENST00000641491 COMMD9Q9P000 198 aa10.44□□□□□ -0.74
PHGDH-218ENST00000641491 POMT1Q9Y6A1 747 aa10.44□□□□□ -0.74
PHGDH-218ENST00000641491 DSCAML1Q8TD84 2053 aa10.44□□□□□ -0.74
PHGDH-218ENST00000641491 FBN1P35555 2871 aaKnown RBP10.44□□□□□ -0.74
PHGDH-218ENST00000641491 LINC00473A8K010 186 aa10.43□□□□□ -0.74
PHGDH-218ENST00000641491 VGLL3A8MV65 326 aa10.43□□□□□ -0.74
PHGDH-218ENST00000641491 M0QZK8 103 aa10.43□□□□□ -0.74
PHGDH-218ENST00000641491 RBFOX2O43251 390 aaKnown RBP eCLIP10.43□□□□□ -0.747e-8■■□□□ 12.4
PHGDH-218ENST00000641491 HOXA3O43365 443 aaPredicted RBP10.43□□□□□ -0.74
PHGDH-218ENST00000641491 SSNA1O43805 119 aa10.43□□□□□ -0.74
PHGDH-218ENST00000641491 VENTXO95231 258 aa10.43□□□□□ -0.74
PHGDH-218ENST00000641491 IFNA21P01568 189 aa10.43□□□□□ -0.74
PHGDH-218ENST00000641491 NQO2P16083 231 aa10.43□□□□□ -0.74
PHGDH-218ENST00000641491 PAX6P26367 422 aa10.43□□□□□ -0.74
PHGDH-218ENST00000641491 LPAR6P43657 344 aa10.43□□□□□ -0.74
PHGDH-218ENST00000641491 LGALS7P47929 136 aa10.43□□□□□ -0.74
PHGDH-218ENST00000641491 THOC7Q6I9Y2 204 aaKnown RBP10.43□□□□□ -0.74
PHGDH-218ENST00000641491 CCBE1Q6UXH8 406 aaPredicted RBP10.43□□□□□ -0.74
PHGDH-218ENST00000641491 Q6YL49 198 aa10.43□□□□□ -0.74
PHGDH-218ENST00000641491 C16orf82Q7Z2V1 217 aa10.43□□□□□ -0.74
PHGDH-218ENST00000641491 LYG2Q86SG7 212 aa10.43□□□□□ -0.74
PHGDH-218ENST00000641491 TMEM86BQ8N661 226 aa10.43□□□□□ -0.74
PHGDH-218ENST00000641491 GPHA2Q96T91 129 aa10.43□□□□□ -0.74
PHGDH-218ENST00000641491 FAM212BQ9NTI7 297 aaPredicted RBP10.43□□□□□ -0.74
PHGDH-218ENST00000641491 VPREB3Q9UKI3 123 aa10.43□□□□□ -0.74
PHGDH-218ENST00000641491 TCF19Q9Y242 345 aa10.43□□□□□ -0.74
PHGDH-218ENST00000641491 MOB4Q9Y3A3 225 aa10.43□□□□□ -0.74
PHGDH-218ENST00000641491 SNAPC5O75971 98 aa10.42□□□□□ -0.74
PHGDH-218ENST00000641491 SPDEFO95238 335 aa10.42□□□□□ -0.74
PHGDH-218ENST00000641491 SFT2D2O95562 160 aa10.42□□□□□ -0.74
PHGDH-218ENST00000641491 IGLV2-14P01704 120 aa10.42□□□□□ -0.74
PHGDH-218ENST00000641491 IGHV4-59P01825 116 aa10.42□□□□□ -0.74
PHGDH-218ENST00000641491 CD24P25063 80 aa10.42□□□□□ -0.74
PHGDH-218ENST00000641491 RAG2P55895 527 aa10.42□□□□□ -0.74
PHGDH-218ENST00000641491 PPP1R1AQ13522 171 aa10.42□□□□□ -0.74
PHGDH-218ENST00000641491 SP6Q3SY56 376 aa10.42□□□□□ -0.74
PHGDH-218ENST00000641491 TMEM268Q5VZI3 342 aa10.42□□□□□ -0.74
PHGDH-218ENST00000641491 LIN54Q6MZP7 749 aa10.42□□□□□ -0.74
PHGDH-218ENST00000641491 H2BFWTQ7Z2G1 175 aa10.42□□□□□ -0.74
PHGDH-218ENST00000641491 DYNAPQ8N1N2 210 aa10.42□□□□□ -0.74
PHGDH-218ENST00000641491 ABHD5Q8WTS1 349 aa10.42□□□□□ -0.74
PHGDH-218ENST00000641491 MRGPRFQ96AM1 343 aa10.42□□□□□ -0.74
PHGDH-218ENST00000641491 C5orf30Q96GV9 206 aa10.42□□□□□ -0.74
PHGDH-218ENST00000641491 SLC25A33Q9BSK2 321 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms