RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 CD40LGP29965 261 aa13□□□□□ -0.33
CACNA1A-259ENST00000638114 DUTP33316 252 aaKnown RBP13□□□□□ -0.33
CACNA1A-259ENST00000638114 PJVKQ0ZLH3 352 aa13□□□□□ -0.33
CACNA1A-259ENST00000638114 TMEM177Q53S58 311 aa13□□□□□ -0.33
CACNA1A-259ENST00000638114 ASPHD1Q5U4P2 390 aa13□□□□□ -0.33
CACNA1A-259ENST00000638114 CNIH2Q6PI25 160 aa13□□□□□ -0.33
CACNA1A-259ENST00000638114 MS4A10Q96PG2 267 aa13□□□□□ -0.33
CACNA1A-259ENST00000638114 ALX4Q9H161 411 aaPredicted RBP13□□□□□ -0.33
CACNA1A-259ENST00000638114 OR2W1Q9Y3N9 320 aa13□□□□□ -0.33
CACNA1A-259ENST00000638114 A0A087WXM4 84 aa12.99□□□□□ -0.33
CACNA1A-259ENST00000638114 LINC00473A8K010 186 aa12.99□□□□□ -0.33
CACNA1A-259ENST00000638114 TNFAIP8O95379 198 aa12.99□□□□□ -0.33
CACNA1A-259ENST00000638114 CRYZL1O95825 349 aa12.99□□□□□ -0.33
CACNA1A-259ENST00000638114 TPPP2P59282 170 aa12.99□□□□□ -0.33
CACNA1A-259ENST00000638114 ZNF645Q8N7E2 425 aa12.99□□□□□ -0.33
CACNA1A-259ENST00000638114 TSPAN14Q8NG11 270 aa12.99□□□□□ -0.33
CACNA1A-259ENST00000638114 DDB2Q92466 427 aa12.99□□□□□ -0.33
CACNA1A-259ENST00000638114 ANXA10Q9UJ72 324 aa12.99□□□□□ -0.33
CACNA1A-259ENST00000638114 SRRM4A7MD48 611 aaKnown RBP12.98□□□□□ -0.33
CACNA1A-259ENST00000638114 AIREO43918 545 aa12.98□□□□□ -0.33
CACNA1A-259ENST00000638114 IGHV3-11P01762 117 aa12.98□□□□□ -0.33
CACNA1A-259ENST00000638114 CRYGBP07316 175 aa12.98□□□□□ -0.33
CACNA1A-259ENST00000638114 LGALS1P09382 135 aaKnown RBP12.98□□□□□ -0.33
CACNA1A-259ENST00000638114 TGFBR1P36897 503 aa12.98□□□□□ -0.33
CACNA1A-259ENST00000638114 SSBP2P81877 361 aaPredicted RBP12.98□□□□□ -0.33
CACNA1A-259ENST00000638114 VMA21Q3ZAQ7 101 aa12.98□□□□□ -0.33
CACNA1A-259ENST00000638114 DIABLOQ9NR28 239 aa12.98□□□□□ -0.33
CACNA1A-259ENST00000638114 ZNF355PQ9NSJ1 428 aa12.98□□□□□ -0.33
CACNA1A-259ENST00000638114 SPATA2Q9UM82 520 aa12.98□□□□□ -0.33
CACNA1A-259ENST00000638114 A0A0A6YYH2 397 aa12.97□□□□□ -0.33
CACNA1A-259ENST00000638114 A6NJ64 397 aa12.97□□□□□ -0.33
CACNA1A-259ENST00000638114 LINC01619G3V211 115 aa12.97□□□□□ -0.33
CACNA1A-259ENST00000638114 RAMP3O60896 148 aa12.97□□□□□ -0.33
CACNA1A-259ENST00000638114 TUSC2O75896 110 aa12.97□□□□□ -0.33
CACNA1A-259ENST00000638114 HLA-DQB1P01920 261 aa12.97□□□□□ -0.33
CACNA1A-259ENST00000638114 TRGV3P03979 118 aa12.97□□□□□ -0.33
CACNA1A-259ENST00000638114 ARPC4P59998 168 aa12.97□□□□□ -0.33
CACNA1A-259ENST00000638114 LSM3P62310 102 aaKnown RBP12.97□□□□□ -0.33
CACNA1A-259ENST00000638114 KCTD9Q7L273 389 aa12.97□□□□□ -0.33
CACNA1A-259ENST00000638114 BEST4Q8NFU0 473 aa12.97□□□□□ -0.33
CACNA1A-259ENST00000638114 OR5T1Q8NG75 326 aa12.97□□□□□ -0.33
CACNA1A-259ENST00000638114 DCUN1D4Q92564 292 aa12.97□□□□□ -0.33
CACNA1A-259ENST00000638114 YIPF6Q96EC8 236 aa12.97□□□□□ -0.33
CACNA1A-259ENST00000638114 DCUN1D5Q9BTE7 237 aa12.97□□□□□ -0.33
CACNA1A-259ENST00000638114 SLA2Q9H6Q3 261 aa12.97□□□□□ -0.33
CACNA1A-259ENST00000638114 RBMX2Q9Y388 322 aaKnown RBP12.97□□□□□ -0.33
CACNA1A-259ENST00000638114 PRELID3BQ9Y3B1 194 aa12.97□□□□□ -0.33
CACNA1A-259ENST00000638114 IGHV4OR15-8A0A075B7B6 117 aa12.96□□□□□ -0.33
CACNA1A-259ENST00000638114 A0A087WW49 117 aa12.96□□□□□ -0.33
CACNA1A-259ENST00000638114 IGKV1D-13A0A0B4J2D9 117 aa12.96□□□□□ -0.33
CACNA1A-259ENST00000638114 OVOL1O14753 267 aa12.96□□□□□ -0.33
CACNA1A-259ENST00000638114 FCGR3BO75015 233 aa12.96□□□□□ -0.33
CACNA1A-259ENST00000638114 TMEM127O75204 238 aa12.96□□□□□ -0.33
CACNA1A-259ENST00000638114 SLC22A5O76082 557 aa12.96□□□□□ -0.33
CACNA1A-259ENST00000638114 IGKV1-13P0DP09 117 aa12.96□□□□□ -0.33
CACNA1A-259ENST00000638114 ECI1P42126 302 aa12.96□□□□□ -0.33
CACNA1A-259ENST00000638114 SLURP1P55000 103 aa12.96□□□□□ -0.33
CACNA1A-259ENST00000638114 UBE2KP61086 200 aa12.96□□□□□ -0.33
CACNA1A-259ENST00000638114 OR2B11Q5JQS5 317 aa12.96□□□□□ -0.33
CACNA1A-259ENST00000638114 IDO2Q6ZQW0 420 aa12.96□□□□□ -0.33
CACNA1A-259ENST00000638114 CROCCP3Q8IVE0 287 aa12.96□□□□□ -0.33
CACNA1A-259ENST00000638114 GVQW1Q8N7I0 195 aa12.96□□□□□ -0.33
CACNA1A-259ENST00000638114 TEX45Q8NA69 505 aa12.96□□□□□ -0.33
CACNA1A-259ENST00000638114 POC5Q8NA72 575 aa12.96□□□□□ -0.33
CACNA1A-259ENST00000638114 OSR1Q8TAX0 266 aaPredicted RBP12.96□□□□□ -0.33
CACNA1A-259ENST00000638114 AUNIPQ9H7T9 357 aa12.96□□□□□ -0.33
CACNA1A-259ENST00000638114 SCOCQ9UIL1 159 aa12.96□□□□□ -0.33
CACNA1A-259ENST00000638114 MRPS7Q9Y2R9 242 aaKnown RBP12.96□□□□□ -0.33
CACNA1A-259ENST00000638114 FCER2P06734 321 aa12.95□□□□□ -0.34
CACNA1A-259ENST00000638114 DCTN2Q13561 401 aaKnown RBP12.95□□□□□ -0.34
CACNA1A-259ENST00000638114 TNXAQ16473 311 aa12.95□□□□□ -0.34
CACNA1A-259ENST00000638114 HOGA1Q86XE5 327 aa12.95□□□□□ -0.34
CACNA1A-259ENST00000638114 TCTEX1D2Q8WW35 142 aa12.95□□□□□ -0.34
CACNA1A-259ENST00000638114 DLX4Q92988 240 aaPredicted RBP12.95□□□□□ -0.34
CACNA1A-259ENST00000638114 PRR25Q96S07 402 aa12.95□□□□□ -0.34
CACNA1A-259ENST00000638114 PHB2Q99623 299 aa12.95□□□□□ -0.34
CACNA1A-259ENST00000638114 H3BUA1 57 aa12.94□□□□□ -0.34
CACNA1A-259ENST00000638114 IGLV2-14P01704 120 aa12.94□□□□□ -0.34
CACNA1A-259ENST00000638114 SAA1P0DJI8 122 aaPredicted RBP12.94□□□□□ -0.34
CACNA1A-259ENST00000638114 APELAP0DMC3 54 aa12.94□□□□□ -0.34
CACNA1A-259ENST00000638114 PTHLHP12272 177 aa12.94□□□□□ -0.34
CACNA1A-259ENST00000638114 RPS19P39019 145 aaKnown RBP12.94□□□□□ -0.34
CACNA1A-259ENST00000638114 INSL3P51460 131 aa12.94□□□□□ -0.34
CACNA1A-259ENST00000638114 RPL30P62888 115 aaKnown RBP12.94□□□□□ -0.34
CACNA1A-259ENST00000638114 PRSS8Q16651 343 aa12.94□□□□□ -0.34
CACNA1A-259ENST00000638114 MRGPRG-AS1Q2M3A8 158 aa12.94□□□□□ -0.34
CACNA1A-259ENST00000638114 ACOT12Q8WYK0 555 aa12.94□□□□□ -0.34
CACNA1A-259ENST00000638114 RHOVQ96L33 236 aa12.94□□□□□ -0.34
CACNA1A-259ENST00000638114 TMEM68Q96MH6 324 aa12.94□□□□□ -0.34
CACNA1A-259ENST00000638114 HSD17B10Q99714 261 aaKnown RBP12.94□□□□□ -0.34
CACNA1A-259ENST00000638114 C13orf42A0A1B0GVH6 325 aa12.93□□□□□ -0.34
CACNA1A-259ENST00000638114 MSGN1A6NI15 193 aa12.93□□□□□ -0.34
CACNA1A-259ENST00000638114 SAP30O75446 220 aa12.93□□□□□ -0.34
CACNA1A-259ENST00000638114 HSPB1P04792 205 aaKnown RBP12.93□□□□□ -0.34
CACNA1A-259ENST00000638114 AADACP22760 399 aa12.93□□□□□ -0.34
CACNA1A-259ENST00000638114 FCGR2CP31995 323 aa12.93□□□□□ -0.34
CACNA1A-259ENST00000638114 CBX5P45973 191 aa12.93□□□□□ -0.34
CACNA1A-259ENST00000638114 CD69Q07108 199 aa12.93□□□□□ -0.34
CACNA1A-259ENST00000638114 CDK10Q15131 360 aa12.93□□□□□ -0.34
CACNA1A-259ENST00000638114 UBE2NLQ5JXB2 153 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms