RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 IL36BQ9NZH7 164 aa12.41□□□□□ -0.42
CACNA1A-220ENST00000635988 TRAV38-1A0A0B4J264 116 aa12.4□□□□□ -0.42
CACNA1A-220ENST00000635988 NXPH2O95156 264 aa12.4□□□□□ -0.42
CACNA1A-220ENST00000635988 CXorf1O96002 111 aa12.4□□□□□ -0.42
CACNA1A-220ENST00000635988 LHX2P50458 406 aa12.4□□□□□ -0.42
CACNA1A-220ENST00000635988 IGFBP7Q16270 282 aa12.4□□□□□ -0.42
CACNA1A-220ENST00000635988 PHF7Q9BWX1 381 aaPredicted RBP12.4□□□□□ -0.42
CACNA1A-220ENST00000635988 QTRT1Q9BXR0 403 aaKnown RBP12.4□□□□□ -0.42
CACNA1A-220ENST00000635988 ZNF407Q9C0G0 2248 aa12.4□□□□□ -0.42
CACNA1A-220ENST00000635988 GRIFINA4D1Z8 144 aa12.4□□□□□ -0.42
CACNA1A-220ENST00000635988 BRS3P32247 399 aa12.4□□□□□ -0.42
CACNA1A-220ENST00000635988 OPRK1P41145 380 aa12.4□□□□□ -0.42
CACNA1A-220ENST00000635988 FOXG1P55316 489 aaPredicted RBP12.4□□□□□ -0.42
CACNA1A-220ENST00000635988 RPL19P84098 196 aaKnown RBP12.4□□□□□ -0.42
CACNA1A-220ENST00000635988 TRIP6Q15654 476 aaKnown RBP12.4□□□□□ -0.42
CACNA1A-220ENST00000635988 MYPOPQ86VE0 399 aaPredicted RBP12.4□□□□□ -0.42
CACNA1A-220ENST00000635988 SCCPDHQ8NBX0 429 aa12.4□□□□□ -0.42
CACNA1A-220ENST00000635988 IFI44Q8TCB0 444 aa12.4□□□□□ -0.42
CACNA1A-220ENST00000635988 HLA-CQ95604 372 aa12.4□□□□□ -0.42
CACNA1A-220ENST00000635988 HSPB9Q9BQS6 159 aa12.4□□□□□ -0.42
CACNA1A-220ENST00000635988 TRBV9A0A0B4J1U6 114 aa12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 C15orf62A8K5M9 175 aa12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 PRSS47A8MTI9 375 aa12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 C17orf98A8MV24 154 aa12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 A8MXE2 369 aa12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 DEFA4P12838 97 aa12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 SPINK2P20155 84 aa12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 Q0VG73 95 aa12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 ZNF808Q8N4W9 903 aaPredicted RBP12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 MRPL18Q9H0U6 180 aaKnown RBP12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 SZT2Q5T011 3432 aa12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 NCKAP5O14513 1909 aa12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 TRBV20OR9-2A0A075B6H5 130 aa12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 OOEPA6NGQ2 149 aa12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 C3orf80F5H4A9 247 aa12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 J3QW42 95 aa12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 SERF1AO75920 110 aa12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 NEURL1O76050 574 aa12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 STAG3L2P0CL84 134 aa12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 STAG3L3P0CL85 134 aa12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 EDDM3BP56851 147 aa12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 RPS16P62249 146 aaKnown RBP12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 SRYQ05066 204 aa12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 BAGE3Q86Y29 109 aa12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 BAGE2Q86Y30 109 aa12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 OR2J1Q9GZK6 312 aa12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 TP53TG3Q9ULZ0 132 aa12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 LY96Q9Y6Y9 160 aa12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 RANBP2P49792 3224 aaKnown RBP12.39□□□□□ -0.43
CACNA1A-220ENST00000635988 PGPEP1LA6NFU8 196 aa12.38□□□□□ -0.43
CACNA1A-220ENST00000635988 OR4B1Q8NGF8 309 aa12.38□□□□□ -0.43
CACNA1A-220ENST00000635988 OCC1Q8TAD7 63 aa12.38□□□□□ -0.43
CACNA1A-220ENST00000635988 HSD17B10Q99714 261 aaKnown RBP12.38□□□□□ -0.43
CACNA1A-220ENST00000635988 SAMD10Q9BYL1 202 aa12.38□□□□□ -0.43
CACNA1A-220ENST00000635988 ZNF703Q9H7S9 590 aaPredicted RBP12.38□□□□□ -0.43
CACNA1A-220ENST00000635988 LPAR2Q9HBW0 351 aa12.38□□□□□ -0.43
CACNA1A-220ENST00000635988 B4GALT7Q9UBV7 327 aa12.38□□□□□ -0.43
CACNA1A-220ENST00000635988 PINLYPA6NC86 204 aa12.38□□□□□ -0.43
CACNA1A-220ENST00000635988 C12orf77C9JDV5 145 aa12.38□□□□□ -0.43
CACNA1A-220ENST00000635988 WISP2O76076 250 aa12.38□□□□□ -0.43
CACNA1A-220ENST00000635988 ARL14EPLP0DKL9 152 aa12.38□□□□□ -0.43
CACNA1A-220ENST00000635988 CCL4P13236 92 aa12.38□□□□□ -0.43
CACNA1A-220ENST00000635988 CBLN1P23435 193 aa12.38□□□□□ -0.43
CACNA1A-220ENST00000635988 BRWD1-AS2P59051 145 aa12.38□□□□□ -0.43
CACNA1A-220ENST00000635988 PDLIM3Q53GG5 364 aaPredicted RBP12.38□□□□□ -0.43
CACNA1A-220ENST00000635988 GCSAMLQ5JQS6 135 aa12.38□□□□□ -0.43
CACNA1A-220ENST00000635988 COL5A1-AS1Q5SY13 56 aa12.38□□□□□ -0.43
CACNA1A-220ENST00000635988 SLC35E4Q6ICL7 350 aa12.38□□□□□ -0.43
CACNA1A-220ENST00000635988 PPP1R32Q7Z5V6 425 aa12.38□□□□□ -0.43
CACNA1A-220ENST00000635988 NANOS1Q8WY41 292 aaKnown RBP12.38□□□□□ -0.43
CACNA1A-220ENST00000635988 C5orf30Q96GV9 206 aa12.38□□□□□ -0.43
CACNA1A-220ENST00000635988 PAM16Q9Y3D7 125 aa12.38□□□□□ -0.43
CACNA1A-220ENST00000635988 NPSP0C0P6 89 aa12.37□□□□□ -0.43
CACNA1A-220ENST00000635988 CLDN18P56856 261 aa12.37□□□□□ -0.43
CACNA1A-220ENST00000635988 Q0VFX4 171 aa12.37□□□□□ -0.43
CACNA1A-220ENST00000635988 LYSMD4Q5XG99 296 aa12.37□□□□□ -0.43
CACNA1A-220ENST00000635988 WDR86Q86TI4 376 aa12.37□□□□□ -0.43
CACNA1A-220ENST00000635988 FAM90A9PA6NNJ1 464 aa12.37□□□□□ -0.43
CACNA1A-220ENST00000635988 C9JCJ5 164 aa12.37□□□□□ -0.43
CACNA1A-220ENST00000635988 HAND1O96004 215 aa12.37□□□□□ -0.43
CACNA1A-220ENST00000635988 MT-CO2P00403 227 aa12.37□□□□□ -0.43
CACNA1A-220ENST00000635988 BMP5P22003 454 aa12.37□□□□□ -0.43
CACNA1A-220ENST00000635988 OTX2P32243 289 aa12.37□□□□□ -0.43
CACNA1A-220ENST00000635988 LINC00310P59036 64 aa12.37□□□□□ -0.43
CACNA1A-220ENST00000635988 TGFBR3Q03167 851 aa12.37□□□□□ -0.43
CACNA1A-220ENST00000635988 AARDQ4LEZ3 155 aa12.37□□□□□ -0.43
CACNA1A-220ENST00000635988 ARSJQ5FYB0 599 aaPredicted RBP12.37□□□□□ -0.43
CACNA1A-220ENST00000635988 VN1R17PQ8TDU5 208 aa12.37□□□□□ -0.43
CACNA1A-220ENST00000635988 SCO2A0A1W2PP80 73 aa12.36□□□□□ -0.43
CACNA1A-220ENST00000635988 A6NNC1 897 aa12.36□□□□□ -0.43
CACNA1A-220ENST00000635988 MT-CO3P00414 261 aa12.36□□□□□ -0.43
CACNA1A-220ENST00000635988 HBZP02008 142 aa12.36□□□□□ -0.43
CACNA1A-220ENST00000635988 IL6RP08887 468 aaPredicted RBP12.36□□□□□ -0.43
CACNA1A-220ENST00000635988 OR1C1Q15619 314 aa12.36□□□□□ -0.43
CACNA1A-220ENST00000635988 SIGLECL1Q8N7X8 197 aa12.36□□□□□ -0.43
CACNA1A-220ENST00000635988 OR52L2PQ8NGH6 319 aa12.36□□□□□ -0.43
CACNA1A-220ENST00000635988 OR1L6Q8NGR2 347 aa12.36□□□□□ -0.43
CACNA1A-220ENST00000635988 FAM173AQ9BQD7 235 aa12.36□□□□□ -0.43
CACNA1A-220ENST00000635988 ZNF586Q9NXT0 402 aa12.36□□□□□ -0.43
CACNA1A-220ENST00000635988 SDK1Q7Z5N4 2213 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms