RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 STPG2Q8N412 459 aa12.19□□□□□ -0.46
SNRNP48-203ENST00000634363 COMMD1Q8N668 190 aa12.19□□□□□ -0.46
SNRNP48-203ENST00000634363 Q8N9W7 124 aa12.19□□□□□ -0.46
SNRNP48-203ENST00000634363 ZNF383Q8NA42 475 aa12.19□□□□□ -0.46
SNRNP48-203ENST00000634363 RBMXL1Q96E39 390 aaKnown RBP12.19□□□□□ -0.46
SNRNP48-203ENST00000634363 DIRAS2Q96HU8 199 aa12.19□□□□□ -0.46
SNRNP48-203ENST00000634363 ADTRPQ96IZ2 230 aa12.19□□□□□ -0.46
SNRNP48-203ENST00000634363 PRR25Q96S07 402 aa12.19□□□□□ -0.46
SNRNP48-203ENST00000634363 ASCL2Q99929 193 aa12.19□□□□□ -0.46
SNRNP48-203ENST00000634363 SLC35D1Q9NTN3 355 aa12.19□□□□□ -0.46
SNRNP48-203ENST00000634363 DNAH3Q8TD57 4116 aa12.19□□□□□ -0.46
SNRNP48-203ENST00000634363 IGKV1D-13A0A0B4J2D9 117 aa12.18□□□□□ -0.46
SNRNP48-203ENST00000634363 PPYP01298 95 aa12.18□□□□□ -0.46
SNRNP48-203ENST00000634363 IGHG2P01859 326 aa12.18□□□□□ -0.46
SNRNP48-203ENST00000634363 PMP2P02689 132 aa12.18□□□□□ -0.46
SNRNP48-203ENST00000634363 RPLP1P05386 114 aaKnown RBP12.18□□□□□ -0.46
SNRNP48-203ENST00000634363 IGKV1-13P0DP09 117 aa12.18□□□□□ -0.46
SNRNP48-203ENST00000634363 NAT1P18440 290 aa12.18□□□□□ -0.46
SNRNP48-203ENST00000634363 AADACP22760 399 aa12.18□□□□□ -0.46
SNRNP48-203ENST00000634363 HLA-DMAP28067 261 aa12.18□□□□□ -0.46
SNRNP48-203ENST00000634363 ECI1P42126 302 aa12.18□□□□□ -0.46
SNRNP48-203ENST00000634363 F2RL1P55085 397 aa12.18□□□□□ -0.46
SNRNP48-203ENST00000634363 FXYD4P59646 89 aa12.18□□□□□ -0.46
SNRNP48-203ENST00000634363 HERV-K104P61576 105 aa12.18□□□□□ -0.46
SNRNP48-203ENST00000634363 TAGLNQ01995 201 aaKnown RBP12.18□□□□□ -0.46
SNRNP48-203ENST00000634363 RTL8BQ17RB0 113 aa12.18□□□□□ -0.46
SNRNP48-203ENST00000634363 SECTM1Q8WVN6 248 aa12.18□□□□□ -0.46
SNRNP48-203ENST00000634363 PLSCR3Q9NRY6 295 aa12.18□□□□□ -0.46
SNRNP48-203ENST00000634363 RABL2AQ9UBK7 228 aaPredicted RBP12.18□□□□□ -0.46
SNRNP48-203ENST00000634363 RABL2BQ9UNT1 228 aa12.18□□□□□ -0.46
SNRNP48-203ENST00000634363 HRH1P35367 487 aa12.17□□□□□ -0.46
SNRNP48-203ENST00000634363 RFX2P48378 723 aa12.17□□□□□ -0.46
SNRNP48-203ENST00000634363 LINC00205P59089 165 aa12.17□□□□□ -0.46
SNRNP48-203ENST00000634363 MRPS10P82664 201 aaKnown RBP12.17□□□□□ -0.46
SNRNP48-203ENST00000634363 DYRK1AQ13627 763 aa12.17□□□□□ -0.46
SNRNP48-203ENST00000634363 IL18Q14116 193 aa12.17□□□□□ -0.46
SNRNP48-203ENST00000634363 PLGLAQ15195 96 aa12.17□□□□□ -0.46
SNRNP48-203ENST00000634363 FAM71E2Q8N5Q1 922 aa12.17□□□□□ -0.46
SNRNP48-203ENST00000634363 GIMAP1Q8WWP7 306 aa12.17□□□□□ -0.46
SNRNP48-203ENST00000634363 FCAMRQ8WWV6 532 aa12.17□□□□□ -0.46
SNRNP48-203ENST00000634363 FLYWCH2Q96CP2 140 aaKnown RBP12.17□□□□□ -0.46
SNRNP48-203ENST00000634363 C5orf30Q96GV9 206 aa12.17□□□□□ -0.46
SNRNP48-203ENST00000634363 TSNAXQ99598 290 aaKnown RBP12.17□□□□□ -0.46
SNRNP48-203ENST00000634363 RNF5Q99942 180 aa12.17□□□□□ -0.46
SNRNP48-203ENST00000634363 NDUFA13Q9P0J0 144 aa12.17□□□□□ -0.46
SNRNP48-203ENST00000634363 RBMX2Q9Y388 322 aaKnown RBP12.17□□□□□ -0.46
SNRNP48-203ENST00000634363 IGKV1-16P04430 117 aa12.16□□□□□ -0.46
SNRNP48-203ENST00000634363 RRASP10301 218 aa12.16□□□□□ -0.46
SNRNP48-203ENST00000634363 CNTFRP26992 372 aa12.16□□□□□ -0.46
SNRNP48-203ENST00000634363 DUTP33316 252 aaKnown RBP12.16□□□□□ -0.46
SNRNP48-203ENST00000634363 RPS16P62249 146 aaKnown RBP12.16□□□□□ -0.46
SNRNP48-203ENST00000634363 ACTBL2Q562R1 376 aa12.16□□□□□ -0.46
SNRNP48-203ENST00000634363 CXorf66Q5JRM2 361 aaPredicted RBP12.16□□□□□ -0.46
SNRNP48-203ENST00000634363 C9orf66Q5T8R8 295 aa12.16□□□□□ -0.46
SNRNP48-203ENST00000634363 PYHIN1Q6K0P9 492 aa12.16□□□□□ -0.46
SNRNP48-203ENST00000634363 KCTD9Q7L273 389 aa12.16□□□□□ -0.46
SNRNP48-203ENST00000634363 OVCH2Q7RTZ1 564 aa12.16□□□□□ -0.46
SNRNP48-203ENST00000634363 TMEM17Q86X19 198 aa12.16□□□□□ -0.46
SNRNP48-203ENST00000634363 NPBQ8NG41 125 aa12.16□□□□□ -0.46
SNRNP48-203ENST00000634363 OR5M8Q8NGP6 311 aa12.16□□□□□ -0.46
SNRNP48-203ENST00000634363 OR52I2Q8NH67 350 aa12.16□□□□□ -0.46
SNRNP48-203ENST00000634363 RITA1Q96K30 269 aa12.16□□□□□ -0.46
SNRNP48-203ENST00000634363 ABHD1Q96SE0 405 aa12.16□□□□□ -0.46
SNRNP48-203ENST00000634363 ZNF2Q9BSG1 426 aaPredicted RBP12.16□□□□□ -0.46
SNRNP48-203ENST00000634363 SLC5A7Q9GZV3 580 aa12.16□□□□□ -0.46
SNRNP48-203ENST00000634363 NXF2Q9GZY0 626 aaKnown RBP12.16□□□□□ -0.46
SNRNP48-203ENST00000634363 ZNF107Q9UII5 783 aaPredicted RBP12.16□□□□□ -0.46
SNRNP48-203ENST00000634363 LSM4Q9Y4Z0 139 aaKnown RBP12.16□□□□□ -0.46
SNRNP48-203ENST00000634363 TENM3Q9P273 2699 aa12.16□□□□□ -0.46
SNRNP48-203ENST00000634363 GABARAPH6UMI1 98 aa12.15□□□□□ -0.46
SNRNP48-203ENST00000634363 AP4M1O00189 453 aa12.15□□□□□ -0.46
SNRNP48-203ENST00000634363 RRHO14718 337 aa12.15□□□□□ -0.46
SNRNP48-203ENST00000634363 S100A5P33763 92 aa12.15□□□□□ -0.46
SNRNP48-203ENST00000634363 TSPAN5P62079 268 aa12.15□□□□□ -0.46
SNRNP48-203ENST00000634363 C5orf64Q2M2E5 130 aa12.15□□□□□ -0.46
SNRNP48-203ENST00000634363 BVESQ8NE79 360 aa12.15□□□□□ -0.46
SNRNP48-203ENST00000634363 OR6F1Q8NGZ6 308 aa12.15□□□□□ -0.46
SNRNP48-203ENST00000634363 BORCS5Q969J3 196 aa12.15□□□□□ -0.46
SNRNP48-203ENST00000634363 HARBI1Q96MB7 349 aa12.15□□□□□ -0.46
SNRNP48-203ENST00000634363 HSD17B10Q99714 261 aaKnown RBP12.15□□□□□ -0.46
SNRNP48-203ENST00000634363 GON7Q9BXV9 100 aa12.15□□□□□ -0.46
SNRNP48-203ENST00000634363 KLK11Q9UBX7 282 aa12.15□□□□□ -0.46
SNRNP48-203ENST00000634363 MTFP1Q9UDX5 166 aa12.15□□□□□ -0.46
SNRNP48-203ENST00000634363 PRELID3BQ9Y3B1 194 aa12.15□□□□□ -0.46
SNRNP48-203ENST00000634363 SEC14L6B5MCN3 397 aa12.14□□□□□ -0.47
SNRNP48-203ENST00000634363 SHOXO15266 292 aa12.14□□□□□ -0.47
SNRNP48-203ENST00000634363 NDUFA3O95167 84 aa12.14□□□□□ -0.47
SNRNP48-203ENST00000634363 SPDEFO95238 335 aa12.14□□□□□ -0.47
SNRNP48-203ENST00000634363 HLA-DRB1P01911 266 aa12.14□□□□□ -0.47
SNRNP48-203ENST00000634363 TNFSF8P32971 234 aa12.14□□□□□ -0.47
SNRNP48-203ENST00000634363 MSMO1Q15800 293 aa12.14□□□□□ -0.47
SNRNP48-203ENST00000634363 RNASE10Q5GAN6 216 aaKnown RBP12.14□□□□□ -0.47
SNRNP48-203ENST00000634363 LIN54Q6MZP7 749 aa12.14□□□□□ -0.47
SNRNP48-203ENST00000634363 DHRS11Q6UWP2 260 aa12.14□□□□□ -0.47
SNRNP48-203ENST00000634363 LYSMD2Q8IV50 215 aa12.14□□□□□ -0.47
SNRNP48-203ENST00000634363 ZBTB34Q8NCN2 500 aa12.14□□□□□ -0.47
SNRNP48-203ENST00000634363 TCTEX1D2Q8WW35 142 aa12.14□□□□□ -0.47
SNRNP48-203ENST00000634363 DGCR14Q96DF8 476 aaKnown RBP12.14□□□□□ -0.47
SNRNP48-203ENST00000634363 FBXL15Q9H469 300 aa12.14□□□□□ -0.47
SNRNP48-203ENST00000634363 CCL28Q9NRJ3 127 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms