RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 F11RQ9Y624 299 aaKnown RBP3.33□□□□□ -1.88
R3HDM1-220ENST00000628915 A0A0C4DFX4 3053 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 A0A087WWC5 75 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 ZNF727A8MUV8 499 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 ZNF732B4DXR9 585 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 EEF1E1-BLOC1S5C9J1V9 151 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 IL18BPO95998 194 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 GCSHP23434 173 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 LEPP41159 167 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 MEOX1P50221 254 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 CLDN15P56746 228 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 CLDN6P56747 220 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 IHHQ14623 411 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 INSL4Q14641 139 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 C1QL3Q5VWW1 255 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 C3orf56Q8N813 242 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 SYT8Q8NBV8 401 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 C8orf46Q8TAG6 207 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 BRK1Q8WUW1 75 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 EBPLQ9BY08 206 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 ST20Q9HBF5 79 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 C1RLQ9NZP8 487 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 KLK11Q9UBX7 282 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 IL36AQ9UHA7 158 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 ZNF257Q9Y2Q1 563 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 ZNF860A6NHJ4 632 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 TMEM212A6NML5 194 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 CCDC179H3BU77 68 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 K7EP34 96 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 WNT10BO00744 389 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 LMX1BO60663 402 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 GCM2O75603 506 aaPredicted RBP3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 CXorf1O96002 111 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 FAM157CP0CG43 387 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 MDKP21741 143 aaPredicted RBP3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 TMEM50BP56557 158 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 PCBP3P57721 371 aaKnown RBP3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 LTBQ06643 244 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 PDGFRLQ15198 375 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 C2orf68Q2NKX9 166 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 MST1LQ2TV78 715 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 FRG2Q64ET8 278 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 TREML4Q6UXN2 200 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 STAC2Q6ZMT1 411 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 TMEM219Q86XT9 240 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 TTC9CQ8N5M4 171 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 B3GALNT2Q8NCR0 500 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 RTN4IP1Q8WWV3 396 aaPredicted RBP3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 KLK6Q92876 244 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 FRG2BQ96QU4 278 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 EHFQ9NZC4 300 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 ZNF319Q9P2F9 582 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 MTFP1Q9UDX5 166 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 LSM4Q9Y4Z0 139 aaKnown RBP3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 LRRC37A2A6NM11 1700 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 ATMQ13315 3056 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 APOMO95445 188 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 ZNF20P17024 532 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 SRIP30626 198 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 OPRM1P35372 400 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 ZNF93P35789 620 aaPredicted RBP3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 UBE2NP61088 152 aaKnown RBP3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 FKBP1AP62942 108 aaKnown RBP3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 ADORA2A-AS1P86434 159 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 OR7A5Q15622 319 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 MSMO1Q15800 293 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 ZNF506Q5JVG8 444 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 BHLHA9Q7RTU4 235 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 SAXO1Q8IYX7 474 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 RNF175Q8N4F7 328 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 OR4C16Q8NGL9 310 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 C16orf52Q8NHV5 167 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 VSTM2AQ8TAG5 236 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 RAB37Q96AX2 223 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 DERL3Q96Q80 235 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 SPATA25Q9BR10 227 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 FBXL7Q9UJT9 491 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 HS3ST2Q9Y278 367 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 ZNF443Q9Y2A4 671 aaPredicted RBP3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 SIRT4Q9Y6E7 314 aaPredicted RBP3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 SIP14410 1827 aa3.32□□□□□ -1.88
R3HDM1-220ENST00000628915 A0A087WX48 190 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 TMEM272A0A1B0GTI8 110 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 CD3DP04234 171 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 GPX1P07203 203 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 GALR1P47211 349 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 SSR4P51571 173 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 EFNB2P52799 333 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 HBG1P69891 147 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 ZNF658BQ4V348 819 aaPredicted RBP3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 EEF1DP3Q658K8 133 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 C20orf196Q8IYI0 205 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 RAB42Q8N4Z0 105 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 OR5AK2Q8NH90 309 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 OR1L1Q8NH94 360 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 SYNPRQ8TBG9 265 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 SLC25A40Q8TBP6 338 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 FGF11Q92914 225 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 GABRG3Q99928 467 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 FOXC2Q99958 501 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms