RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 P2RX4Q99571 388 aa14.53□□□□□ -0.08
FAM3A-222ENST00000621967 RNF224P0DH78 156 aa14.52□□□□□ -0.09
FAM3A-222ENST00000621967 BRWD1-AS2P59051 145 aa14.52□□□□□ -0.09
FAM3A-222ENST00000621967 AESQ08117 197 aa14.52□□□□□ -0.09
FAM3A-222ENST00000621967 PNRC1Q12796 327 aaPredicted RBP14.52□□□□□ -0.09
FAM3A-222ENST00000621967 CATR1Q13166 79 aa14.52□□□□□ -0.09
FAM3A-222ENST00000621967 LCN15Q6UWW0 184 aa14.52□□□□□ -0.09
FAM3A-222ENST00000621967 WFDC8Q8IUA0 241 aa14.52□□□□□ -0.09
FAM3A-222ENST00000621967 TCTEX1D1Q8N7M0 179 aa14.52□□□□□ -0.09
FAM3A-222ENST00000621967 OR52L2PQ8NGH6 319 aa14.52□□□□□ -0.09
FAM3A-222ENST00000621967 ZFP92A6NM28 416 aa14.51□□□□□ -0.09
FAM3A-222ENST00000621967 NQO2P16083 231 aa14.51□□□□□ -0.09
FAM3A-222ENST00000621967 ERVFRD-1P60508 538 aa14.51□□□□□ -0.09
FAM3A-222ENST00000621967 B2MP61769 119 aa14.51□□□□□ -0.09
FAM3A-222ENST00000621967 RAB11AP62491 216 aa14.51□□□□□ -0.09
FAM3A-222ENST00000621967 SRSF1Q07955 248 aaKnown RBP eCLIP14.51□□□□□ -0.09
FAM3A-222ENST00000621967 Q6ZR03 302 aa14.51□□□□□ -0.09
FAM3A-222ENST00000621967 WFIKKN1Q96NZ8 548 aa14.51□□□□□ -0.09
FAM3A-222ENST00000621967 A0A1B0GWJ7 208 aa14.51□□□□□ -0.09
FAM3A-222ENST00000621967 ODAMA1E959 279 aa14.51□□□□□ -0.09
FAM3A-222ENST00000621967 LRRC30A6NM36 301 aa14.51□□□□□ -0.09
FAM3A-222ENST00000621967 IFNL4K9M1U5 179 aa14.51□□□□□ -0.09
FAM3A-222ENST00000621967 CLDN1O95832 211 aa14.51□□□□□ -0.09
FAM3A-222ENST00000621967 S100A9P06702 114 aaKnown RBP14.51□□□□□ -0.09
FAM3A-222ENST00000621967 CXCL1P09341 107 aa14.51□□□□□ -0.09
FAM3A-222ENST00000621967 G6PCP35575 357 aa14.51□□□□□ -0.09
FAM3A-222ENST00000621967 RPS10P46783 165 aaKnown RBP14.51□□□□□ -0.09
FAM3A-222ENST00000621967 ZNF83P51522 516 aa14.51□□□□□ -0.09
FAM3A-222ENST00000621967 PAX5Q02548 391 aa14.51□□□□□ -0.09
FAM3A-222ENST00000621967 FAM53AQ6NSI3 398 aaPredicted RBP14.51□□□□□ -0.09
FAM3A-222ENST00000621967 ZNF343Q6P1L6 599 aa14.51□□□□□ -0.09
FAM3A-222ENST00000621967 C22orf34Q6ZV56 151 aa14.51□□□□□ -0.09
FAM3A-222ENST00000621967 ANKHD1Q8IWZ3 2542 aaKnown RBP14.51□□□□□ -0.09
FAM3A-222ENST00000621967 LRRK2Q5S007 2527 aa14.5□□□□□ -0.09
FAM3A-222ENST00000621967 UBE2L5PA0A1B0GUS4 154 aa14.5□□□□□ -0.09
FAM3A-222ENST00000621967 MAP1LC3B2A6NCE7 125 aa14.5□□□□□ -0.09
FAM3A-222ENST00000621967 PMS2P5A8MQ11 134 aa14.5□□□□□ -0.09
FAM3A-222ENST00000621967 S1PR2O95136 353 aa14.5□□□□□ -0.09
FAM3A-222ENST00000621967 PTBP3O95758 552 aaKnown RBP14.5□□□□□ -0.09
FAM3A-222ENST00000621967 IGLV1-44P01699 117 aa14.5□□□□□ -0.09
FAM3A-222ENST00000621967 FGF8P55075 233 aaPredicted RBP14.5□□□□□ -0.09
FAM3A-222ENST00000621967 ATP6V1FQ16864 119 aa14.5□□□□□ -0.09
FAM3A-222ENST00000621967 PRAMEF6Q5VXH4 476 aa14.5□□□□□ -0.09
FAM3A-222ENST00000621967 SLC16A13Q7RTY0 426 aa14.5□□□□□ -0.09
FAM3A-222ENST00000621967 FAM169BQ8N8A8 192 aa14.5□□□□□ -0.09
FAM3A-222ENST00000621967 LINC01560Q8TB33 94 aa14.5□□□□□ -0.09
FAM3A-222ENST00000621967 LURAP1Q96LR2 239 aa14.5□□□□□ -0.09
FAM3A-222ENST00000621967 ZNF251Q9BRH9 671 aa14.5□□□□□ -0.09
FAM3A-222ENST00000621967 MRPL37Q9BZE1 423 aaKnown RBP14.5□□□□□ -0.09
FAM3A-222ENST00000621967 MAP1LC3BQ9GZQ8 125 aa14.5□□□□□ -0.09
FAM3A-222ENST00000621967 NGBQ9NPG2 151 aa14.5□□□□□ -0.09
FAM3A-222ENST00000621967 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.5□□□□□ -0.09
FAM3A-222ENST00000621967 TMEM242Q9NWH2 141 aa14.5□□□□□ -0.09
FAM3A-222ENST00000621967 VAX2Q9UIW0 290 aa14.5□□□□□ -0.09
FAM3A-222ENST00000621967 C17orf98A8MV24 154 aa14.49□□□□□ -0.09
FAM3A-222ENST00000621967 M0R1B8 84 aa14.49□□□□□ -0.09
FAM3A-222ENST00000621967 KRASP01116 189 aa14.49□□□□□ -0.09
FAM3A-222ENST00000621967 THBDP07204 575 aa14.49□□□□□ -0.09
FAM3A-222ENST00000621967 CECR9P0C854 216 aa14.49□□□□□ -0.09
FAM3A-222ENST00000621967 HOXA4Q00056 320 aaPredicted RBP14.49□□□□□ -0.09
FAM3A-222ENST00000621967 ZNF816Q0VGE8 651 aaPredicted RBP14.49□□□□□ -0.09
FAM3A-222ENST00000621967 NANPQ8TBE9 248 aa14.49□□□□□ -0.09
FAM3A-222ENST00000621967 MRGPRDQ8TDS7 321 aa14.49□□□□□ -0.09
FAM3A-222ENST00000621967 TCTEX1D2Q8WW35 142 aa14.49□□□□□ -0.09
FAM3A-222ENST00000621967 NINJ1Q92982 152 aa14.49□□□□□ -0.09
FAM3A-222ENST00000621967 RAB29O14966 203 aa14.49□□□□□ -0.09
FAM3A-222ENST00000621967 TIMM8AO60220 97 aaPredicted RBP14.49□□□□□ -0.09
FAM3A-222ENST00000621967 IFNA1P01562 189 aa14.49□□□□□ -0.09
FAM3A-222ENST00000621967 GABRA2P47869 451 aa14.49□□□□□ -0.09
FAM3A-222ENST00000621967 RND2P52198 227 aa14.49□□□□□ -0.09
FAM3A-222ENST00000621967 SMIM21Q3B7S5 101 aa14.49□□□□□ -0.09
FAM3A-222ENST00000621967 OR2B11Q5JQS5 317 aa14.49□□□□□ -0.09
FAM3A-222ENST00000621967 OR8G2PQ6IF36 304 aa14.49□□□□□ -0.09
FAM3A-222ENST00000621967 SDF2L1Q9HCN8 221 aa14.49□□□□□ -0.09
FAM3A-222ENST00000621967 DSCAML1Q8TD84 2053 aa14.48□□□□□ -0.09
FAM3A-222ENST00000621967 IGHV1-18A0A0C4DH31 117 aa14.48□□□□□ -0.09
FAM3A-222ENST00000621967 CLN5O75503 358 aa14.48□□□□□ -0.09
FAM3A-222ENST00000621967 IGKV1D-33P01593 117 aa14.48□□□□□ -0.09
FAM3A-222ENST00000621967 IGKV1-33P01594 117 aa14.48□□□□□ -0.09
FAM3A-222ENST00000621967 ELLP55199 621 aaPredicted RBP14.48□□□□□ -0.09
FAM3A-222ENST00000621967 COL10A1Q03692 680 aa14.48□□□□□ -0.09
FAM3A-222ENST00000621967 KIAA0141Q14154 515 aaPredicted RBP14.48□□□□□ -0.09
FAM3A-222ENST00000621967 MBNL2Q5VZF2 373 aaKnown RBP14.48□□□□□ -0.09
FAM3A-222ENST00000621967 ZNF66Q6ZN08 573 aa14.48□□□□□ -0.09
FAM3A-222ENST00000621967 RPP25LQ8N5L8 163 aaKnown RBP14.48□□□□□ -0.09
FAM3A-222ENST00000621967 OR13A1Q8NGR1 328 aa14.48□□□□□ -0.09
FAM3A-222ENST00000621967 TMEM147Q9BVK8 224 aa14.48□□□□□ -0.09
FAM3A-222ENST00000621967 METRNQ9UJH8 293 aa14.48□□□□□ -0.09
FAM3A-222ENST00000621967 LAMP3Q9UQV4 416 aa14.48□□□□□ -0.09
FAM3A-222ENST00000621967 C19orf84I3L1E1 186 aa14.47□□□□□ -0.09
FAM3A-222ENST00000621967 CYB5R3P00387 301 aaPredicted RBP14.47□□□□□ -0.09
FAM3A-222ENST00000621967 TFF1P04155 84 aa14.47□□□□□ -0.09
FAM3A-222ENST00000621967 HOXA5P20719 270 aa14.47□□□□□ -0.09
FAM3A-222ENST00000621967 SSTR5P35346 364 aa14.47□□□□□ -0.09
FAM3A-222ENST00000621967 C3orf36Q3SXR2 165 aa14.47□□□□□ -0.09
FAM3A-222ENST00000621967 ZNF718Q3SXZ3 478 aa14.47□□□□□ -0.09
FAM3A-222ENST00000621967 TMEM108Q6UXF1 575 aa14.47□□□□□ -0.09
FAM3A-222ENST00000621967 C1orf174Q8IYL3 243 aa14.47□□□□□ -0.09
FAM3A-222ENST00000621967 COL12A1Q99715 3063 aa14.47□□□□□ -0.09
FAM3A-222ENST00000621967 TGIF2-C20orf24A0A0A6YYL0 155 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms