RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 HIF1ANQ9NWT6 349 aa9.25□□□□□ -0.93
SLIRP-212ENST00000613856 PRELID3BQ9Y3B1 194 aa9.25□□□□□ -0.93
SLIRP-212ENST00000613856 TBL2Q9Y4P3 447 aaKnown RBP9.25□□□□□ -0.93
SLIRP-212ENST00000613856 AUP1Q9Y679 476 aa9.25□□□□□ -0.93
SLIRP-212ENST00000613856 MINOS1-NBL1R4GNA1 71 aa9.25□□□□□ -0.93
SLIRP-212ENST00000613856 LEUTXA8MZ59 168 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 OOSP1A8MZH6 123 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 TCF21O43680 179 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 TGFAP01135 160 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 SERPINE2P07093 398 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 CT45A6P0DMU7 189 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 CT45A5P0DMU8 189 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 CT45A7P0DMV0 189 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 CEACAM3P40198 252 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 BRWD1-AS2P59051 145 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 MIDNQ504T8 468 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 ZNF585BQ52M93 769 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 TPTE2P1Q5T6R2 138 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 DHRS7BQ6IAN0 325 aaPredicted RBP9.24□□□□□ -0.93
SLIRP-212ENST00000613856 AKAP14Q86UN6 197 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 TGIF2LXQ8IUE1 241 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 SPAG16Q8N0X2 631 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 ZNF383Q8NA42 475 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 OR5AN1Q8NGI8 311 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 OR4S2Q8NH73 311 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 LHFPL5Q8TAF8 219 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 RBPMSQ93062 196 aaKnown RBP9.24□□□□□ -0.93
SLIRP-212ENST00000613856 LHX4Q969G2 390 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 NABP2Q9BQ15 211 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 MRPL20Q9BYC9 149 aaKnown RBP9.24□□□□□ -0.93
SLIRP-212ENST00000613856 PRR13Q9NZ81 148 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 COMMD9Q9P000 198 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 DPM3Q9P2X0 92 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 MGAT4CQ9UBM8 478 aa9.24□□□□□ -0.93
SLIRP-212ENST00000613856 PKD1L1Q8TDX9 2849 aa9.23□□□□□ -0.93
SLIRP-212ENST00000613856 GOSR2O14653 212 aa9.23□□□□□ -0.93
SLIRP-212ENST00000613856 APOA2P02652 100 aa9.23□□□□□ -0.93
SLIRP-212ENST00000613856 GAPDHP04406 335 aaKnown RBP9.23□□□□□ -0.93
SLIRP-212ENST00000613856 RRASP10301 218 aa9.23□□□□□ -0.93
SLIRP-212ENST00000613856 CXCL3P19876 107 aa9.23□□□□□ -0.93
SLIRP-212ENST00000613856 PRB3Q04118 309 aaPredicted RBP9.23□□□□□ -0.93
SLIRP-212ENST00000613856 C2orf68Q2NKX9 166 aa9.23□□□□□ -0.93
SLIRP-212ENST00000613856 LDLRAD2Q5SZI1 272 aa9.23□□□□□ -0.93
SLIRP-212ENST00000613856 TMEM268Q5VZI3 342 aa9.23□□□□□ -0.93
SLIRP-212ENST00000613856 LIN54Q6MZP7 749 aa9.23□□□□□ -0.93
SLIRP-212ENST00000613856 ZNF695Q8IW36 515 aa9.23□□□□□ -0.93
SLIRP-212ENST00000613856 SELENOHQ8IZQ5 122 aaKnown RBP9.23□□□□□ -0.93
SLIRP-212ENST00000613856 OR8H3Q8N146 312 aa9.23□□□□□ -0.93
SLIRP-212ENST00000613856 UXS1Q8NBZ7 420 aa9.23□□□□□ -0.93
SLIRP-212ENST00000613856 RPEQ96AT9 228 aa9.23□□□□□ -0.93
SLIRP-212ENST00000613856 NEURL2Q9BR09 285 aa9.23□□□□□ -0.93
SLIRP-212ENST00000613856 C7orf69Q9H7B7 122 aa9.23□□□□□ -0.93
SLIRP-212ENST00000613856 PLEKHA2Q9HB19 425 aa9.23□□□□□ -0.93
SLIRP-212ENST00000613856 TMED3Q9Y3Q3 217 aa9.23□□□□□ -0.93
SLIRP-212ENST00000613856 CENPVL3A0A0U1RRI6 287 aa9.22□□□□□ -0.93
SLIRP-212ENST00000613856 A0A1W2PPI3 338 aa9.22□□□□□ -0.93
SLIRP-212ENST00000613856 H0YJW9 148 aa9.22□□□□□ -0.93
SLIRP-212ENST00000613856 RAMP3O60896 148 aa9.22□□□□□ -0.93
SLIRP-212ENST00000613856 FCGR3BO75015 233 aa9.22□□□□□ -0.93
SLIRP-212ENST00000613856 ATG12O94817 140 aa9.22□□□□□ -0.93
SLIRP-212ENST00000613856 OR2A4O95047 310 aa9.22□□□□□ -0.93
SLIRP-212ENST00000613856 HPRT1P00492 218 aa9.22□□□□□ -0.93
SLIRP-212ENST00000613856 IGKV1-39P01597 117 aa9.22□□□□□ -0.93
SLIRP-212ENST00000613856 IGKV1D-39P04432 117 aa9.22□□□□□ -0.93
SLIRP-212ENST00000613856 GIPP09681 153 aaPredicted RBP9.22□□□□□ -0.93
SLIRP-212ENST00000613856 EPHA1P21709 976 aa9.22□□□□□ -0.93
SLIRP-212ENST00000613856 VDAC1P21796 283 aa9.22□□□□□ -0.93
SLIRP-212ENST00000613856 RAB13P51153 203 aa9.22□□□□□ -0.93
SLIRP-212ENST00000613856 SRSF4Q08170 494 aaKnown RBP9.22□□□□□ -0.93
SLIRP-212ENST00000613856 DIAPH2-AS1Q14236 149 aa9.22□□□□□ -0.93
SLIRP-212ENST00000613856 HABP2Q14520 560 aaPredicted RBP9.22□□□□□ -0.93
SLIRP-212ENST00000613856 RTL8BQ17RB0 113 aa9.22□□□□□ -0.93
SLIRP-212ENST00000613856 CCDC144NLQ6NUI1 221 aa9.22□□□□□ -0.93
SLIRP-212ENST00000613856 PDPNQ86YL7 162 aa9.22□□□□□ -0.93
SLIRP-212ENST00000613856 SLC35G3Q8N808 338 aa9.22□□□□□ -0.93
SLIRP-212ENST00000613856 DRAXINQ8NBI3 349 aaPredicted RBP9.22□□□□□ -0.93
SLIRP-212ENST00000613856 OR2A7Q96R45 310 aa9.22□□□□□ -0.93
SLIRP-212ENST00000613856 ZNF436Q9C0F3 470 aaPredicted RBP9.22□□□□□ -0.93
SLIRP-212ENST00000613856 SLC35D1Q9NTN3 355 aa9.22□□□□□ -0.93
SLIRP-212ENST00000613856 TRRAPQ9Y4A5 3859 aa9.21□□□□□ -0.93
SLIRP-212ENST00000613856 TRAV40A0A0B4J280 105 aa9.21□□□□□ -0.94
SLIRP-212ENST00000613856 IGHV1-69DA0A0B4J2H0 117 aa9.21□□□□□ -0.94
SLIRP-212ENST00000613856 IGHV1-3A0A0C4DH29 117 aa9.21□□□□□ -0.94
SLIRP-212ENST00000613856 NPFFO15130 113 aa9.21□□□□□ -0.94
SLIRP-212ENST00000613856 PFDN1O60925 122 aa9.21□□□□□ -0.94
SLIRP-212ENST00000613856 ADAP1O75689 374 aa9.21□□□□□ -0.94
SLIRP-212ENST00000613856 CCNKO75909 580 aa9.21□□□□□ -0.94
SLIRP-212ENST00000613856 S1PR2O95136 353 aa9.21□□□□□ -0.94
SLIRP-212ENST00000613856 IFNA21P01568 189 aa9.21□□□□□ -0.94
SLIRP-212ENST00000613856 IGHV1-69P01742 117 aa9.21□□□□□ -0.94
SLIRP-212ENST00000613856 HOXB5P09067 269 aa9.21□□□□□ -0.94
SLIRP-212ENST00000613856 MC5RP33032 325 aa9.21□□□□□ -0.94
SLIRP-212ENST00000613856 LPAR6P43657 344 aa9.21□□□□□ -0.94
SLIRP-212ENST00000613856 REG1BP48304 166 aa9.21□□□□□ -0.94
SLIRP-212ENST00000613856 LGALS4P56470 323 aa9.21□□□□□ -0.94
SLIRP-212ENST00000613856 H2BFSP57053 126 aa9.21□□□□□ -0.94
SLIRP-212ENST00000613856 LINC00205P59089 165 aa9.21□□□□□ -0.94
SLIRP-212ENST00000613856 POU2AF1Q16633 256 aa9.21□□□□□ -0.94
SLIRP-212ENST00000613856 NMSQ5H8A3 153 aa9.21□□□□□ -0.94
SLIRP-212ENST00000613856 OR2B11Q5JQS5 317 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms