RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 HIST1H2BAQ96A08 127 aa14.96□□□□□ -0.01
HMGXB3-206ENST00000613459 LMX1BO60663 402 aa14.96□□□□□ -0.02
HMGXB3-206ENST00000613459 UBE2L6O14933 153 aa14.95□□□□□ -0.02
HMGXB3-206ENST00000613459 TRGC1P0CF51 173 aa14.95□□□□□ -0.02
HMGXB3-206ENST00000613459 FGF11Q92914 225 aa14.95□□□□□ -0.02
HMGXB3-206ENST00000613459 PGLYRP4Q96LB8 373 aa14.95□□□□□ -0.02
HMGXB3-206ENST00000613459 LINC00587B1AMM8 73 aa14.95□□□□□ -0.02
HMGXB3-206ENST00000613459 RBFOX2O43251 390 aaKnown RBP eCLIP14.95□□□□□ -0.02
HMGXB3-206ENST00000613459 OR9G1Q8NH87 305 aa14.95□□□□□ -0.02
HMGXB3-206ENST00000613459 MAP1BP46821 2468 aaKnown RBP14.95□□□□□ -0.02
HMGXB3-206ENST00000613459 ADAMTSL1Q8N6G6 1762 aa14.95□□□□□ -0.02
HMGXB3-206ENST00000613459 A0A1W2PPE3 182 aa14.95□□□□□ -0.02
HMGXB3-206ENST00000613459 IL11P20809 199 aa14.95□□□□□ -0.02
HMGXB3-206ENST00000613459 TMEM54Q969K7 222 aa14.95□□□□□ -0.02
HMGXB3-206ENST00000613459 LINC00470Q9BZP3 86 aa14.95□□□□□ -0.02
HMGXB3-206ENST00000613459 PSMG4Q5JS54 123 aa14.95□□□□□ -0.02
HMGXB3-206ENST00000613459 TMEM183AQ8IXX5 376 aa14.95□□□□□ -0.02
HMGXB3-206ENST00000613459 G6PC2Q9NQR9 355 aa14.95□□□□□ -0.02
HMGXB3-206ENST00000613459 IGHV3-21A0A0B4J1V1 117 aa14.95□□□□□ -0.02
HMGXB3-206ENST00000613459 VENTXO95231 258 aa14.95□□□□□ -0.02
HMGXB3-206ENST00000613459 OR51G1Q8NGK1 321 aa14.95□□□□□ -0.02
HMGXB3-206ENST00000613459 CTHRC1Q96CG8 243 aa14.95□□□□□ -0.02
HMGXB3-206ENST00000613459 PARLQ9H300 379 aa14.95□□□□□ -0.02
HMGXB3-206ENST00000613459 MCM3APO60318 1980 aa14.94□□□□□ -0.02
HMGXB3-206ENST00000613459 TMEM14DPA8MWL7 114 aa14.94□□□□□ -0.02
HMGXB3-206ENST00000613459 FAM106AQ4KMX7 169 aa14.94□□□□□ -0.02
HMGXB3-206ENST00000613459 SLC22A18ASQ8N1D0 253 aa14.94□□□□□ -0.02
HMGXB3-206ENST00000613459 GGACTQ9BVM4 153 aa14.94□□□□□ -0.02
HMGXB3-206ENST00000613459 GCM2O75603 506 aaPredicted RBP14.94□□□□□ -0.02
HMGXB3-206ENST00000613459 SRIP30626 198 aa14.94□□□□□ -0.02
HMGXB3-206ENST00000613459 CCL8P80075 99 aa14.94□□□□□ -0.02
HMGXB3-206ENST00000613459 GLRX5Q86SX6 157 aa14.94□□□□□ -0.02
HMGXB3-206ENST00000613459 OPN3Q9H1Y3 402 aaPredicted RBP14.94□□□□□ -0.02
HMGXB3-206ENST00000613459 NUP214P35658 2090 aaPredicted RBP14.94□□□□□ -0.02
HMGXB3-206ENST00000613459 TMEM250H0YL14 139 aa14.94□□□□□ -0.02
HMGXB3-206ENST00000613459 SOD3P08294 240 aa14.94□□□□□ -0.02
HMGXB3-206ENST00000613459 APELAP0DMC3 54 aa14.94□□□□□ -0.02
HMGXB3-206ENST00000613459 WFDC3Q8IUB2 231 aa14.94□□□□□ -0.02
HMGXB3-206ENST00000613459 OR4C13Q8NGP0 309 aa14.94□□□□□ -0.02
HMGXB3-206ENST00000613459 H7C2G1 150 aa14.94□□□□□ -0.02
HMGXB3-206ENST00000613459 C1QL1O75973 258 aa14.94□□□□□ -0.02
HMGXB3-206ENST00000613459 TMEM187Q14656 261 aa14.94□□□□□ -0.02
HMGXB3-206ENST00000613459 SCARF2Q96GP6 870 aaPredicted RBP14.94□□□□□ -0.02
HMGXB3-206ENST00000613459 KIAA1217Q5T5P2 1943 aa14.94□□□□□ -0.02
HMGXB3-206ENST00000613459 CD8AP01732 235 aa14.93□□□□□ -0.02
HMGXB3-206ENST00000613459 RND2P52198 227 aa14.93□□□□□ -0.02
HMGXB3-206ENST00000613459 CIRBPQ14011 172 aaKnown RBP14.93□□□□□ -0.02
HMGXB3-206ENST00000613459 TMEM177Q53S58 311 aa14.93□□□□□ -0.02
HMGXB3-206ENST00000613459 MIC13Q5XKP0 118 aa14.93□□□□□ -0.02
HMGXB3-206ENST00000613459 RELQ04864 619 aaPredicted RBP14.93□□□□□ -0.02
HMGXB3-206ENST00000613459 CXorf66Q5JRM2 361 aaPredicted RBP14.93□□□□□ -0.02
HMGXB3-206ENST00000613459 SFRP2Q96HF1 295 aa14.93□□□□□ -0.02
HMGXB3-206ENST00000613459 WFIKKN1Q96NZ8 548 aa14.93□□□□□ -0.02
HMGXB3-206ENST00000613459 AMELYQ99218 206 aa14.93□□□□□ -0.02
HMGXB3-206ENST00000613459 SPAARA0A1B0GVQ0 90 aa14.93□□□□□ -0.02
HMGXB3-206ENST00000613459 ARL14EPLP0DKL9 152 aa14.93□□□□□ -0.02
HMGXB3-206ENST00000613459 ANOS1P23352 680 aa14.93□□□□□ -0.02
HMGXB3-206ENST00000613459 POC1AQ8NBT0 407 aa14.93□□□□□ -0.02
HMGXB3-206ENST00000613459 GATAD1Q8WUU5 269 aa14.93□□□□□ -0.02
HMGXB3-206ENST00000613459 DDB2Q92466 427 aa14.93□□□□□ -0.02
HMGXB3-206ENST00000613459 RAX2Q96IS3 184 aa14.93□□□□□ -0.02
HMGXB3-206ENST00000613459 MARCH11A6NNE9 402 aa14.92□□□□□ -0.02
HMGXB3-206ENST00000613459 RRN3P1Q2M238 152 aa14.92□□□□□ -0.02
HMGXB3-206ENST00000613459 UNQ5815/PRO19632Q6UWF5 114 aa14.92□□□□□ -0.02
HMGXB3-206ENST00000613459 OR52M1Q8NGK5 317 aa14.92□□□□□ -0.02
HMGXB3-206ENST00000613459 C5orf66Q9H5L9 145 aa14.92□□□□□ -0.02
HMGXB3-206ENST00000613459 CBLN4Q9NTU7 201 aa14.92□□□□□ -0.02
HMGXB3-206ENST00000613459 PEF1Q9UBV8 284 aaKnown RBP14.92□□□□□ -0.02
HMGXB3-206ENST00000613459 RECKO95980 971 aa14.92□□□□□ -0.02
HMGXB3-206ENST00000613459 SMIM13P0DJ93 91 aa14.92□□□□□ -0.02
HMGXB3-206ENST00000613459 NPBWR2P48146 333 aa14.92□□□□□ -0.02
HMGXB3-206ENST00000613459 UNC119Q13432 240 aa14.92□□□□□ -0.02
HMGXB3-206ENST00000613459 APCDD1LQ8NCL9 501 aa14.92□□□□□ -0.02
HMGXB3-206ENST00000613459 IGKV3-7A0A075B6H7 116 aa14.92□□□□□ -0.02
HMGXB3-206ENST00000613459 NUBP1P53384 320 aa14.92□□□□□ -0.02
HMGXB3-206ENST00000613459 ZNF831Q5JPB2 1677 aa14.92□□□□□ -0.02
HMGXB3-206ENST00000613459 H2BFSP57053 126 aa14.92□□□□□ -0.02
HMGXB3-206ENST00000613459 ASCC3Q8N3C0 2202 aaKnown RBP14.92□□□□□ -0.02
HMGXB3-206ENST00000613459 TAS2R60P59551 318 aa14.92□□□□□ -0.02
HMGXB3-206ENST00000613459 PRSS8Q16651 343 aa14.92□□□□□ -0.02
HMGXB3-206ENST00000613459 ZNF506Q5JVG8 444 aa14.92□□□□□ -0.02
HMGXB3-206ENST00000613459 ELOVL5Q9NYP7 299 aa14.92□□□□□ -0.02
HMGXB3-206ENST00000613459 TMPRSS3P57727 454 aa14.91□□□□□ -0.02
HMGXB3-206ENST00000613459 SAPCD1Q5SSQ6 148 aa14.91□□□□□ -0.02
HMGXB3-206ENST00000613459 PIN1P1O15428 100 aa14.91□□□□□ -0.02
HMGXB3-206ENST00000613459 STAG3L3P0CL85 134 aa14.91□□□□□ -0.02
HMGXB3-206ENST00000613459 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.91□□□□□ -0.02
HMGXB3-206ENST00000613459 PIMREGQ9BSJ6 248 aa14.91□□□□□ -0.02
HMGXB3-206ENST00000613459 TCF19Q9Y242 345 aa14.91□□□□□ -0.02
HMGXB3-206ENST00000613459 LY75O60449 1722 aa14.91□□□□□ -0.02
HMGXB3-206ENST00000613459 CX3CL1P78423 397 aa14.91□□□□□ -0.02
HMGXB3-206ENST00000613459 SH3BGRL3Q9H299 93 aa14.91□□□□□ -0.02
HMGXB3-206ENST00000613459 C2orf83Q53S99 150 aa14.91□□□□□ -0.02
HMGXB3-206ENST00000613459 FOXD3Q9UJU5 478 aaPredicted RBP14.91□□□□□ -0.02
HMGXB3-206ENST00000613459 CARHSP1Q9Y2V2 147 aaKnown RBP14.91□□□□□ -0.02
HMGXB3-206ENST00000613459 RAXQ9Y2V3 346 aa14.91□□□□□ -0.02
HMGXB3-206ENST00000613459 PHLDA3Q9Y5J5 127 aa14.91□□□□□ -0.02
HMGXB3-206ENST00000613459 PATE3B3GLJ2 98 aa14.9□□□□□ -0.02
HMGXB3-206ENST00000613459 COL4A1P02462 1669 aa14.9□□□□□ -0.02
HMGXB3-206ENST00000613459 EMP1P54849 157 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms