RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 ATP6V1FQ16864 119 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 LCN15Q6UWW0 184 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 WDR82Q6UXN9 313 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.26□□□□□ -0.45
CDH1-213ENST00000612417 VAX2Q9UIW0 290 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 ATRXP46100 2492 aa12.26□□□□□ -0.45
CDH1-213ENST00000612417 UBE2L5PA0A1B0GUS4 154 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 MAP1LC3B2A6NCE7 125 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 CLDN1O95832 211 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 IFNA1P01562 189 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 CXCL1P09341 107 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 BRWD1-AS2P59051 145 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 AESQ08117 197 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 ZNF343Q6P1L6 599 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 ZNF826PQ6ZT77 177 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 SSX9Q7RTT3 188 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 FAM169BQ8N8A8 192 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 OR52L2PQ8NGH6 319 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 NINJ1Q92982 152 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 LURAP1Q96LR2 239 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 MRPL37Q9BZE1 423 aaKnown RBP12.25□□□□□ -0.45
CDH1-213ENST00000612417 MAP1LC3BQ9GZQ8 125 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 FZR1Q9UM11 496 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 LAMP3Q9UQV4 416 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 DOCK11Q5JSL3 2073 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 ODAMA1E959 279 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 CLDN14O95500 239 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 RAB4AP20338 218 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 G6PCP35575 357 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 FABP6P51161 128 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 RND2P52198 227 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 Q6ZR03 302 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 SLC16A13Q7RTY0 426 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 OR13D1Q8NGV5 346 aa12.25□□□□□ -0.45
CDH1-213ENST00000612417 TPRP12270 2363 aaKnown RBP12.24□□□□□ -0.45
CDH1-213ENST00000612417 TRGV8A0A0C4DH27 118 aa12.24□□□□□ -0.45
CDH1-213ENST00000612417 PMS2P5A8MQ11 134 aa12.24□□□□□ -0.45
CDH1-213ENST00000612417 RAB29O14966 203 aa12.24□□□□□ -0.45
CDH1-213ENST00000612417 S1PR2O95136 353 aa12.24□□□□□ -0.45
CDH1-213ENST00000612417 KRASP01116 189 aa12.24□□□□□ -0.45
CDH1-213ENST00000612417 FGF8P55075 233 aaPredicted RBP12.24□□□□□ -0.45
CDH1-213ENST00000612417 CASP6P55212 293 aa12.24□□□□□ -0.45
CDH1-213ENST00000612417 KIAA0141Q14154 515 aaPredicted RBP12.24□□□□□ -0.45
CDH1-213ENST00000612417 SMIM21Q3B7S5 101 aa12.24□□□□□ -0.45
CDH1-213ENST00000612417 ZNF718Q3SXZ3 478 aa12.24□□□□□ -0.45
CDH1-213ENST00000612417 LBHQ53QV2 105 aaPredicted RBP12.24□□□□□ -0.45
CDH1-213ENST00000612417 ZNF66Q6ZN08 573 aa12.24□□□□□ -0.45
CDH1-213ENST00000612417 TMEM147Q9BVK8 224 aa12.24□□□□□ -0.45
CDH1-213ENST00000612417 TMPRSS5Q9H3S3 457 aa12.24□□□□□ -0.45
CDH1-213ENST00000612417 TIMM8AO60220 97 aaPredicted RBP12.23□□□□□ -0.45
CDH1-213ENST00000612417 CYB5R3P00387 301 aaPredicted RBP12.23□□□□□ -0.45
CDH1-213ENST00000612417 HOXA5P20719 270 aa12.23□□□□□ -0.45
CDH1-213ENST00000612417 GCH1P30793 250 aa12.23□□□□□ -0.45
CDH1-213ENST00000612417 GABRA2P47869 451 aa12.23□□□□□ -0.45
CDH1-213ENST00000612417 COTL1Q14019 142 aa12.23□□□□□ -0.45
CDH1-213ENST00000612417 MBNL2Q5VZF2 373 aaKnown RBP12.23□□□□□ -0.45
CDH1-213ENST00000612417 OR8G2PQ6IF36 304 aa12.23□□□□□ -0.45
CDH1-213ENST00000612417 C1orf174Q8IYL3 243 aa12.23□□□□□ -0.45
CDH1-213ENST00000612417 RPP25LQ8N5L8 163 aaKnown RBP12.23□□□□□ -0.45
CDH1-213ENST00000612417 RND1Q92730 232 aa12.23□□□□□ -0.45
CDH1-213ENST00000612417 CIB3Q96Q77 187 aaPredicted RBP12.23□□□□□ -0.45
CDH1-213ENST00000612417 AGMATQ9BSE5 352 aa12.23□□□□□ -0.45
CDH1-213ENST00000612417 SDF2L1Q9HCN8 221 aa12.23□□□□□ -0.45
CDH1-213ENST00000612417 TRBV23-1A0A0A0MS06 115 aa12.23□□□□□ -0.45
CDH1-213ENST00000612417 C17orf98A8MV24 154 aa12.23□□□□□ -0.45
CDH1-213ENST00000612417 ATXN7O15265 892 aaPredicted RBP12.23□□□□□ -0.45
CDH1-213ENST00000612417 PTBP3O95758 552 aaKnown RBP12.23□□□□□ -0.45
CDH1-213ENST00000612417 ELLP55199 621 aaPredicted RBP12.23□□□□□ -0.45
CDH1-213ENST00000612417 ZNF816Q0VGE8 651 aaPredicted RBP12.23□□□□□ -0.45
CDH1-213ENST00000612417 VWC2Q2TAL6 325 aa12.23□□□□□ -0.45
CDH1-213ENST00000612417 TRAT1Q6PIZ9 186 aa12.23□□□□□ -0.45
CDH1-213ENST00000612417 ZNF808Q8N4W9 903 aaPredicted RBP12.23□□□□□ -0.45
CDH1-213ENST00000612417 MRGPRDQ8TDS7 321 aa12.23□□□□□ -0.45
CDH1-213ENST00000612417 FAM216AQ8WUB2 273 aa12.23□□□□□ -0.45
CDH1-213ENST00000612417 HSD17B10Q99714 261 aaKnown RBP12.23□□□□□ -0.45
CDH1-213ENST00000612417 NCOR1P1Q9H4R4 102 aa12.23□□□□□ -0.45
CDH1-213ENST00000612417 CACNA1AO00555 2505 aa12.22□□□□□ -0.45
CDH1-213ENST00000612417 TGIF2-C20orf24A0A0A6YYL0 155 aa12.22□□□□□ -0.45
CDH1-213ENST00000612417 C16orf97H3BN30 126 aa12.22□□□□□ -0.45
CDH1-213ENST00000612417 IGKV1D-33P01593 117 aa12.22□□□□□ -0.45
CDH1-213ENST00000612417 IGKV1-33P01594 117 aa12.22□□□□□ -0.45
CDH1-213ENST00000612417 MBP02144 154 aa12.22□□□□□ -0.45
CDH1-213ENST00000612417 CRYAAP02489 173 aa12.22□□□□□ -0.45
CDH1-213ENST00000612417 HTD2P86397 168 aa12.22□□□□□ -0.45
CDH1-213ENST00000612417 PRAMEF6Q5VXH4 476 aa12.22□□□□□ -0.45
CDH1-213ENST00000612417 FAM53AQ6NSI3 398 aaPredicted RBP12.22□□□□□ -0.45
CDH1-213ENST00000612417 PFDN5Q99471 154 aa12.22□□□□□ -0.45
CDH1-213ENST00000612417 SLC39A9Q9NUM3 307 aa12.22□□□□□ -0.45
CDH1-213ENST00000612417 ELOVL5Q9NYP7 299 aa12.22□□□□□ -0.45
CDH1-213ENST00000612417 URGCP-MRPS24S4R325 110 aa12.22□□□□□ -0.45
CDH1-213ENST00000612417 CEBPZOSA8MTT3 80 aa12.22□□□□□ -0.45
CDH1-213ENST00000612417 CLDN34H7C241 214 aa12.22□□□□□ -0.45
CDH1-213ENST00000612417 ZNF737O75373 536 aa12.22□□□□□ -0.45
CDH1-213ENST00000612417 COL10A1Q03692 680 aa12.22□□□□□ -0.45
CDH1-213ENST00000612417 ZNF674Q2M3X9 581 aa12.22□□□□□ -0.45
CDH1-213ENST00000612417 OR2B11Q5JQS5 317 aa12.22□□□□□ -0.45
CDH1-213ENST00000612417 WDR25Q64LD2 544 aaPredicted RBP12.22□□□□□ -0.45
CDH1-213ENST00000612417 ACSM6Q6P461 480 aa12.22□□□□□ -0.45
CDH1-213ENST00000612417 OR13A1Q8NGR1 328 aa12.22□□□□□ -0.45
CDH1-213ENST00000612417 DTD1Q8TEA8 209 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms