RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 SNRPBP14678 240 aaKnown RBP12.19□□□□□ -0.46
VRK3-221ENST00000600284 PSMB9P28065 219 aa12.19□□□□□ -0.46
VRK3-221ENST00000600284 SLURP1P55000 103 aa12.19□□□□□ -0.46
VRK3-221ENST00000600284 PITPNAQ00169 270 aa12.19□□□□□ -0.46
VRK3-221ENST00000600284 HACD4Q5VWC8 232 aa12.19□□□□□ -0.46
VRK3-221ENST00000600284 ACSM6Q6P461 480 aa12.19□□□□□ -0.46
VRK3-221ENST00000600284 POC5Q8NA72 575 aa12.19□□□□□ -0.46
VRK3-221ENST00000600284 BVESQ8NE79 360 aa12.19□□□□□ -0.46
VRK3-221ENST00000600284 GRPEL2Q8TAA5 225 aa12.19□□□□□ -0.46
VRK3-221ENST00000600284 SLC22A5O76082 557 aa12.18□□□□□ -0.46
VRK3-221ENST00000600284 IGHV3-11P01762 117 aa12.18□□□□□ -0.46
VRK3-221ENST00000600284 DUTP33316 252 aaKnown RBP12.18□□□□□ -0.46
VRK3-221ENST00000600284 SSBP2P81877 361 aaPredicted RBP12.18□□□□□ -0.46
VRK3-221ENST00000600284 PJVKQ0ZLH3 352 aa12.18□□□□□ -0.46
VRK3-221ENST00000600284 TEX45Q8NA69 505 aa12.18□□□□□ -0.46
VRK3-221ENST00000600284 DDB2Q92466 427 aa12.18□□□□□ -0.46
VRK3-221ENST00000600284 C5orf30Q96GV9 206 aa12.18□□□□□ -0.46
VRK3-221ENST00000600284 RANGRFQ9HD47 186 aaPredicted RBP12.18□□□□□ -0.46
VRK3-221ENST00000600284 ZNF355PQ9NSJ1 428 aa12.18□□□□□ -0.46
VRK3-221ENST00000600284 SMAD5-AS1Q9Y6J3 95 aa12.18□□□□□ -0.46
VRK3-221ENST00000600284 IGKV1D-8A0A087WSZ0 117 aa12.17□□□□□ -0.46
VRK3-221ENST00000600284 C13orf42A0A1B0GVH6 325 aa12.17□□□□□ -0.46
VRK3-221ENST00000600284 SRRM4A7MD48 611 aaKnown RBP12.17□□□□□ -0.46
VRK3-221ENST00000600284 LY86O95711 162 aa12.17□□□□□ -0.46
VRK3-221ENST00000600284 SCAND1P57086 179 aa12.17□□□□□ -0.46
VRK3-221ENST00000600284 UBE2KP61086 200 aa12.17□□□□□ -0.46
VRK3-221ENST00000600284 VMA21Q3ZAQ7 101 aa12.17□□□□□ -0.46
VRK3-221ENST00000600284 OR5T1Q8NG75 326 aa12.17□□□□□ -0.46
VRK3-221ENST00000600284 OR6Q1Q8NGQ2 317 aa12.17□□□□□ -0.46
VRK3-221ENST00000600284 OSR1Q8TAX0 266 aaPredicted RBP12.17□□□□□ -0.46
VRK3-221ENST00000600284 ST6GALNAC5Q9BVH7 336 aa12.17□□□□□ -0.46
VRK3-221ENST00000600284 ELF5Q9UKW6 265 aaPredicted RBP12.17□□□□□ -0.46
VRK3-221ENST00000600284 HLA-DQB1P01920 261 aa12.16□□□□□ -0.46
VRK3-221ENST00000600284 ZP3P21754 424 aa12.16□□□□□ -0.46
VRK3-221ENST00000600284 AADACP22760 399 aa12.16□□□□□ -0.46
VRK3-221ENST00000600284 SFXN4Q6P4A7 337 aa12.16□□□□□ -0.46
VRK3-221ENST00000600284 CNIH2Q6PI25 160 aa12.16□□□□□ -0.46
VRK3-221ENST00000600284 ZNF773Q6PK81 442 aa12.16□□□□□ -0.46
VRK3-221ENST00000600284 ZNF645Q8N7E2 425 aa12.16□□□□□ -0.46
VRK3-221ENST00000600284 OR4C12Q96R67 309 aa12.16□□□□□ -0.46
VRK3-221ENST00000600284 ELOVL1Q9BW60 279 aa12.16□□□□□ -0.46
VRK3-221ENST00000600284 DAPK2Q9UIK4 370 aa12.16□□□□□ -0.46
VRK3-221ENST00000600284 OR2W1Q9Y3N9 320 aa12.16□□□□□ -0.46
VRK3-221ENST00000600284 U3KQK5 164 aa12.16□□□□□ -0.46
VRK3-221ENST00000600284 SMIM30A4D0T7 59 aa12.15□□□□□ -0.46
VRK3-221ENST00000600284 LINC00473A8K010 186 aa12.15□□□□□ -0.46
VRK3-221ENST00000600284 PRSS8Q16651 343 aa12.15□□□□□ -0.46
VRK3-221ENST00000600284 MRGPRG-AS1Q2M3A8 158 aa12.15□□□□□ -0.46
VRK3-221ENST00000600284 USMG5Q96IX5 58 aa12.15□□□□□ -0.46
VRK3-221ENST00000600284 TINAGL1Q9GZM7 467 aaPredicted RBP12.15□□□□□ -0.46
VRK3-221ENST00000600284 PRELID3BQ9Y3B1 194 aa12.15□□□□□ -0.46
VRK3-221ENST00000600284 RRP15Q9Y3B9 282 aaKnown RBP12.15□□□□□ -0.46
VRK3-221ENST00000600284 SORL1Q92673 2214 aa12.15□□□□□ -0.46
VRK3-221ENST00000600284 CREBL2O60519 120 aaPredicted RBP12.14□□□□□ -0.47
VRK3-221ENST00000600284 TMEM127O75204 238 aa12.14□□□□□ -0.47
VRK3-221ENST00000600284 CRYZL1O95825 349 aa12.14□□□□□ -0.47
VRK3-221ENST00000600284 GP9P14770 177 aa12.14□□□□□ -0.47
VRK3-221ENST00000600284 SPNP16150 400 aa12.14□□□□□ -0.47
VRK3-221ENST00000600284 CD36P16671 472 aa12.14□□□□□ -0.47
VRK3-221ENST00000600284 SDC2P34741 201 aa12.14□□□□□ -0.47
VRK3-221ENST00000600284 GNG2P59768 71 aa12.14□□□□□ -0.47
VRK3-221ENST00000600284 OR51E2Q9H255 320 aa12.14□□□□□ -0.47
VRK3-221ENST00000600284 RHBDL2Q9NX52 303 aa12.14□□□□□ -0.47
VRK3-221ENST00000600284 A0A0A6YYH2 397 aa12.13□□□□□ -0.47
VRK3-221ENST00000600284 TMEM235A6NFC5 223 aa12.13□□□□□ -0.47
VRK3-221ENST00000600284 MSGN1A6NI15 193 aa12.13□□□□□ -0.47
VRK3-221ENST00000600284 A6NJ64 397 aa12.13□□□□□ -0.47
VRK3-221ENST00000600284 KLF5Q13887 457 aaPredicted RBP12.13□□□□□ -0.47
VRK3-221ENST00000600284 ZNF343Q6P1L6 599 aa12.13□□□□□ -0.47
VRK3-221ENST00000600284 OVCH2Q7RTZ1 564 aa12.13□□□□□ -0.47
VRK3-221ENST00000600284 LGALS14Q8TCE9 139 aa12.13□□□□□ -0.47
VRK3-221ENST00000600284 NUDCD2Q8WVJ2 157 aa12.13□□□□□ -0.47
VRK3-221ENST00000600284 PHB2Q99623 299 aa12.13□□□□□ -0.47
VRK3-221ENST00000600284 ANXA10Q9UJ72 324 aa12.13□□□□□ -0.47
VRK3-221ENST00000600284 MRPS7Q9Y2R9 242 aaKnown RBP12.13□□□□□ -0.47
VRK3-221ENST00000600284 RBMX2Q9Y388 322 aaKnown RBP12.13□□□□□ -0.47
VRK3-221ENST00000600284 ETV7Q9Y603 341 aa12.13□□□□□ -0.47
VRK3-221ENST00000600284 NFYAP23511 347 aaPredicted RBP12.12□□□□□ -0.47
VRK3-221ENST00000600284 CDK10Q15131 360 aa12.12□□□□□ -0.47
VRK3-221ENST00000600284 TNXAQ16473 311 aa12.12□□□□□ -0.47
VRK3-221ENST00000600284 KCTD9Q7L273 389 aa12.12□□□□□ -0.47
VRK3-221ENST00000600284 MMD2Q8IY49 270 aa12.12□□□□□ -0.47
VRK3-221ENST00000600284 SRSF12Q8WXF0 261 aaKnown RBP12.12□□□□□ -0.47
VRK3-221ENST00000600284 HSD17B10Q99714 261 aaKnown RBP12.12□□□□□ -0.47
VRK3-221ENST00000600284 ASCL2Q99929 193 aa12.12□□□□□ -0.47
VRK3-221ENST00000600284 COA4Q9NYJ1 87 aa12.12□□□□□ -0.47
VRK3-221ENST00000600284 PEF1Q9UBV8 284 aaKnown RBP12.12□□□□□ -0.47
VRK3-221ENST00000600284 KMT2CQ8NEZ4 4911 aaKnown RBP12.12□□□□□ -0.47
VRK3-221ENST00000600284 J3QRK9 145 aa12.11□□□□□ -0.47
VRK3-221ENST00000600284 SSX5O60225 188 aa12.11□□□□□ -0.47
VRK3-221ENST00000600284 FCGR3BO75015 233 aa12.11□□□□□ -0.47
VRK3-221ENST00000600284 TUSC2O75896 110 aa12.11□□□□□ -0.47
VRK3-221ENST00000600284 ACTL6BO94805 426 aa12.11□□□□□ -0.47
VRK3-221ENST00000600284 IGLV1-51P01701 117 aa12.11□□□□□ -0.47
VRK3-221ENST00000600284 IGLV2-14P01704 120 aa12.11□□□□□ -0.47
VRK3-221ENST00000600284 OR9G9P0C7N8 305 aa12.11□□□□□ -0.47
VRK3-221ENST00000600284 SAA1P0DJI8 122 aaPredicted RBP12.11□□□□□ -0.47
VRK3-221ENST00000600284 DYRK1AQ13627 763 aa12.11□□□□□ -0.47
VRK3-221ENST00000600284 TATDN3Q17R31 274 aa12.11□□□□□ -0.47
VRK3-221ENST00000600284 IDO2Q6ZQW0 420 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms