RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 TAF15Q92804 592 aaKnown RBP eCLIP17.87■□□□□ 0.453e-6■■■■■ 28.6
GRAMD1A-212ENST00000600231 QTRT1Q9BXR0 403 aaKnown RBP17.87■□□□□ 0.45
GRAMD1A-212ENST00000600231 SMDT1Q9H4I9 107 aa17.87■□□□□ 0.45
GRAMD1A-212ENST00000600231 NDRG3Q9UGV2 375 aa17.87■□□□□ 0.45
GRAMD1A-212ENST00000600231 KALRNO60229 2985 aa17.86■□□□□ 0.45
GRAMD1A-212ENST00000600231 PMS2P5A8MQ11 134 aa17.86■□□□□ 0.45
GRAMD1A-212ENST00000600231 CEBPZOSA8MTT3 80 aa17.86■□□□□ 0.45
GRAMD1A-212ENST00000600231 OR2B8PP59922 312 aa17.86■□□□□ 0.45
GRAMD1A-212ENST00000600231 HNF4GQ14541 408 aa17.86■□□□□ 0.45
GRAMD1A-212ENST00000600231 VKORC1L1Q8N0U8 176 aa17.86■□□□□ 0.45
GRAMD1A-212ENST00000600231 RPS10P5Q9NQ39 176 aa17.86■□□□□ 0.45
GRAMD1A-212ENST00000600231 SNRNP70P08621 437 aaKnown RBP17.86■□□□□ 0.45
GRAMD1A-212ENST00000600231 H7C2Y5 167 aa17.85■□□□□ 0.45
GRAMD1A-212ENST00000600231 HBE1P02100 147 aa17.85■□□□□ 0.45
GRAMD1A-212ENST00000600231 SERF2P84101 59 aa17.85■□□□□ 0.45
GRAMD1A-212ENST00000600231 TEX36Q5VZQ5 186 aa17.85■□□□□ 0.45
GRAMD1A-212ENST00000600231 WFIKKN1Q96NZ8 548 aa17.85■□□□□ 0.45
GRAMD1A-212ENST00000600231 CIB3Q96Q77 187 aaPredicted RBP17.85■□□□□ 0.45
GRAMD1A-212ENST00000600231 PARD6GQ9BYG4 376 aaPredicted RBP17.85■□□□□ 0.45
GRAMD1A-212ENST00000600231 M0R036 132 aa17.84■□□□□ 0.45
GRAMD1A-212ENST00000600231 TNFRSF1AP19438 455 aa17.84■□□□□ 0.45
GRAMD1A-212ENST00000600231 ZNF726P1Q15940 193 aa17.84■□□□□ 0.45
GRAMD1A-212ENST00000600231 SOHLH1Q5JUK2 328 aa17.84■□□□□ 0.45
GRAMD1A-212ENST00000600231 CLDND2Q8NHS1 167 aa17.84■□□□□ 0.45
GRAMD1A-212ENST00000600231 RBMXL1Q96E39 390 aaKnown RBP17.84■□□□□ 0.45
GRAMD1A-212ENST00000600231 TRAV1-1A0A0B4J248 108 aa17.84■□□□□ 0.45
GRAMD1A-212ENST00000600231 C7orf77A4D0Y5 90 aa17.84■□□□□ 0.45
GRAMD1A-212ENST00000600231 RAB7AP51149 207 aa17.84■□□□□ 0.45
GRAMD1A-212ENST00000600231 RND1Q92730 232 aa17.84■□□□□ 0.45
GRAMD1A-212ENST00000600231 S1PR3Q99500 378 aa17.84■□□□□ 0.45
GRAMD1A-212ENST00000600231 PRELID3BQ9Y3B1 194 aa17.84■□□□□ 0.45
GRAMD1A-212ENST00000600231 MSRB2Q9Y3D2 182 aa17.84■□□□□ 0.45
GRAMD1A-212ENST00000600231 ITGB1BP1O14713 200 aa17.83■□□□□ 0.45
GRAMD1A-212ENST00000600231 TMPRSS2O15393 492 aa17.83■□□□□ 0.45
GRAMD1A-212ENST00000600231 RAB2AP61019 212 aa17.83■□□□□ 0.45
GRAMD1A-212ENST00000600231 ICAM4Q14773 271 aa17.83■□□□□ 0.45
GRAMD1A-212ENST00000600231 SSX7Q7RTT5 188 aa17.83■□□□□ 0.45
GRAMD1A-212ENST00000600231 OR10P1Q8NGE3 313 aa17.83■□□□□ 0.45
GRAMD1A-212ENST00000600231 RAB9BQ9NP90 201 aa17.83■□□□□ 0.45
GRAMD1A-212ENST00000600231 SMCO4Q9NRQ5 59 aa17.83■□□□□ 0.45
GRAMD1A-212ENST00000600231 RBFOX2O43251 390 aaKnown RBP eCLIP17.83■□□□□ 0.44
GRAMD1A-212ENST00000600231 MMP23AO75900 390 aa17.83■□□□□ 0.44
GRAMD1A-212ENST00000600231 SCAF4O95104 1147 aaKnown RBP17.83■□□□□ 0.44
GRAMD1A-212ENST00000600231 FBP1P09467 338 aa17.83■□□□□ 0.44
GRAMD1A-212ENST00000600231 ELLP55199 621 aaPredicted RBP17.83■□□□□ 0.44
GRAMD1A-212ENST00000600231 PRAMEF5Q5TYX0 476 aa17.83■□□□□ 0.44
GRAMD1A-212ENST00000600231 LCN15Q6UWW0 184 aa17.83■□□□□ 0.44
GRAMD1A-212ENST00000600231 RXFP4Q8TDU9 374 aa17.83■□□□□ 0.44
GRAMD1A-212ENST00000600231 DDB2Q92466 427 aa17.83■□□□□ 0.44
GRAMD1A-212ENST00000600231 SAA2-SAA4A0A096LPE2 208 aa17.82■□□□□ 0.44
GRAMD1A-212ENST00000600231 IFNA17P01571 189 aa17.82■□□□□ 0.44
GRAMD1A-212ENST00000600231 SRP19P09132 144 aaKnown RBP17.82■□□□□ 0.44
GRAMD1A-212ENST00000600231 SAA2P0DJI9 122 aaPredicted RBP17.82■□□□□ 0.44
GRAMD1A-212ENST00000600231 RCC1LQ96I51 464 aaKnown RBP17.82■□□□□ 0.44
GRAMD1A-212ENST00000600231 CLCC1Q96S66 551 aa17.82■□□□□ 0.44
GRAMD1A-212ENST00000600231 DIRC2Q96SL1 478 aa17.82■□□□□ 0.44
GRAMD1A-212ENST00000600231 GAB2Q9UQC2 676 aa17.82■□□□□ 0.44
GRAMD1A-212ENST00000600231 DAOP14920 347 aa17.82■□□□□ 0.44
GRAMD1A-212ENST00000600231 RBPJQ06330 500 aa17.82■□□□□ 0.44
GRAMD1A-212ENST00000600231 ZNF506Q5JVG8 444 aa17.82■□□□□ 0.44
GRAMD1A-212ENST00000600231 ZNF251Q9BRH9 671 aa17.82■□□□□ 0.44
GRAMD1A-212ENST00000600231 TMEM147Q9BVK8 224 aa17.82■□□□□ 0.44
GRAMD1A-212ENST00000600231 CEBPGP53567 150 aa17.81■□□□□ 0.44
GRAMD1A-212ENST00000600231 TLE1Q04724 770 aa17.81■□□□□ 0.44
GRAMD1A-212ENST00000600231 ATP6V1FQ16864 119 aa17.81■□□□□ 0.44
GRAMD1A-212ENST00000600231 KDF1Q8NAX2 398 aaPredicted RBP17.81■□□□□ 0.44
GRAMD1A-212ENST00000600231 PINX1Q96BK5 328 aaKnown RBP17.81■□□□□ 0.44
GRAMD1A-212ENST00000600231 TET2Q6N021 2002 aaPredicted RBP17.81■□□□□ 0.44
GRAMD1A-212ENST00000600231 TRAV3A0A0B4J244 114 aa17.81■□□□□ 0.44
GRAMD1A-212ENST00000600231 COLCA2A8K830 154 aa17.81■□□□□ 0.44
GRAMD1A-212ENST00000600231 NQO2P16083 231 aa17.81■□□□□ 0.44
GRAMD1A-212ENST00000600231 PLA2G5P39877 138 aa17.81■□□□□ 0.44
GRAMD1A-212ENST00000600231 FGF8P55075 233 aaPredicted RBP17.81■□□□□ 0.44
GRAMD1A-212ENST00000600231 AARDQ4LEZ3 155 aa17.81■□□□□ 0.44
GRAMD1A-212ENST00000600231 LYG1Q8N1E2 194 aa17.81■□□□□ 0.44
GRAMD1A-212ENST00000600231 OR4A16Q8NH70 328 aa17.81■□□□□ 0.44
GRAMD1A-212ENST00000600231 MBD3L1Q8WWY6 194 aa17.81■□□□□ 0.44
GRAMD1A-212ENST00000600231 SAP30LQ9HAJ7 183 aa17.81■□□□□ 0.44
GRAMD1A-212ENST00000600231 IDI2-AS1Q9NZ38 188 aa17.81■□□□□ 0.44
GRAMD1A-212ENST00000600231 GNG13Q9P2W3 67 aa17.81■□□□□ 0.44
GRAMD1A-212ENST00000600231 PUS1Q9Y606 427 aaKnown RBP eCLIP17.81■□□□□ 0.44
GRAMD1A-212ENST00000600231 ZNF729A6NN14 1252 aaPredicted RBP17.8■□□□□ 0.44
GRAMD1A-212ENST00000600231 EIF3GO75821 320 aaKnown RBP eCLIP17.8■□□□□ 0.44
GRAMD1A-212ENST00000600231 NDUFB7P17568 137 aa17.8■□□□□ 0.44
GRAMD1A-212ENST00000600231 GNG10P50151 68 aa17.8■□□□□ 0.44
GRAMD1A-212ENST00000600231 ERVK-16P61578 105 aa17.8■□□□□ 0.44
GRAMD1A-212ENST00000600231 TMEM41BQ5BJD5 291 aa17.8■□□□□ 0.44
GRAMD1A-212ENST00000600231 ZNF787Q6DD87 383 aa17.8■□□□□ 0.44
GRAMD1A-212ENST00000600231 ZNF439Q8NDP4 499 aa17.8■□□□□ 0.44
GRAMD1A-212ENST00000600231 FAM90A9PA6NNJ1 464 aa17.8■□□□□ 0.44
GRAMD1A-212ENST00000600231 C15orf62A8K5M9 175 aa17.8■□□□□ 0.44
GRAMD1A-212ENST00000600231 HSPB1P04792 205 aaKnown RBP17.8■□□□□ 0.44
GRAMD1A-212ENST00000600231 ERVFRD-1P60508 538 aa17.8■□□□□ 0.44
GRAMD1A-212ENST00000600231 FAM122CQ6P4D5 195 aa17.8■□□□□ 0.44
GRAMD1A-212ENST00000600231 SSX8Q7RTT4 187 aa17.8■□□□□ 0.44
GRAMD1A-212ENST00000600231 CORO2AQ92828 525 aa17.8■□□□□ 0.44
GRAMD1A-212ENST00000600231 LINC00574Q9H8X3 128 aa17.8■□□□□ 0.44
GRAMD1A-212ENST00000600231 NBASA2RRP1 2371 aa17.8■□□□□ 0.44
GRAMD1A-212ENST00000600231 IGKV1D-33P01593 117 aa17.79■□□□□ 0.44
GRAMD1A-212ENST00000600231 IGKV1-33P01594 117 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms