RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 Q9N2K0 584 aa13.08□□□□□ -0.32
SMG9-210ENST00000600097 CSMD3Q7Z407 3707 aa13.08□□□□□ -0.32
SMG9-210ENST00000600097 A0A0A6YYD4 124 aa13.07□□□□□ -0.32
SMG9-210ENST00000600097 M0R1X1 148 aa13.07□□□□□ -0.32
SMG9-210ENST00000600097 SOCS1O15524 211 aa13.07□□□□□ -0.32
SMG9-210ENST00000600097 OR2A4O95047 310 aa13.07□□□□□ -0.32
SMG9-210ENST00000600097 IGLV2-23P01705 113 aa13.07□□□□□ -0.32
SMG9-210ENST00000600097 CSN3P07498 182 aa13.07□□□□□ -0.32
SMG9-210ENST00000600097 PJVKQ0ZLH3 352 aa13.07□□□□□ -0.32
SMG9-210ENST00000600097 NEDD8Q15843 81 aa13.07□□□□□ -0.32
SMG9-210ENST00000600097 FAM89BQ8N5H3 189 aa13.07□□□□□ -0.32
SMG9-210ENST00000600097 OR2K2Q8NGT1 345 aa13.07□□□□□ -0.32
SMG9-210ENST00000600097 RDH8Q9NYR8 311 aa13.07□□□□□ -0.32
SMG9-210ENST00000600097 PEMTQ9UBM1 199 aa13.07□□□□□ -0.32
SMG9-210ENST00000600097 LYSTQ99698 3801 aa13.06□□□□□ -0.32
SMG9-210ENST00000600097 STARD9Q9P2P6 4700 aa13.06□□□□□ -0.32
SMG9-210ENST00000600097 SHISA3A0PJX4 238 aa13.06□□□□□ -0.32
SMG9-210ENST00000600097 PDCD5O14737 125 aa13.06□□□□□ -0.32
SMG9-210ENST00000600097 CRYGBP07316 175 aa13.06□□□□□ -0.32
SMG9-210ENST00000600097 MYL9P24844 172 aa13.06□□□□□ -0.32
SMG9-210ENST00000600097 SERPINB10P48595 397 aa13.06□□□□□ -0.32
SMG9-210ENST00000600097 TAGLNQ01995 201 aaKnown RBP13.06□□□□□ -0.32
SMG9-210ENST00000600097 CBX3Q13185 183 aa13.06□□□□□ -0.32
SMG9-210ENST00000600097 BVESQ8NE79 360 aa13.06□□□□□ -0.32
SMG9-210ENST00000600097 SNAPC3Q92966 411 aa13.06□□□□□ -0.32
SMG9-210ENST00000600097 HARBI1Q96MB7 349 aa13.06□□□□□ -0.32
SMG9-210ENST00000600097 CMSS1Q9BQ75 279 aaKnown RBP13.06□□□□□ -0.32
SMG9-210ENST00000600097 COA4Q9NYJ1 87 aa13.06□□□□□ -0.32
SMG9-210ENST00000600097 SSR3Q9UNL2 185 aa13.06□□□□□ -0.32
SMG9-210ENST00000600097 CEPT1Q9Y6K0 416 aa13.06□□□□□ -0.32
SMG9-210ENST00000600097 A0A0B4J203 849 aa13.05□□□□□ -0.32
SMG9-210ENST00000600097 TRAV1-2A0A0B4J238 106 aa13.05□□□□□ -0.32
SMG9-210ENST00000600097 IGKV1-6A0A0C4DH72 117 aa13.05□□□□□ -0.32
SMG9-210ENST00000600097 TRDCB7Z8K6 153 aa13.05□□□□□ -0.32
SMG9-210ENST00000600097 AIREO43918 545 aa13.05□□□□□ -0.32
SMG9-210ENST00000600097 FGF9P31371 208 aaPredicted RBP13.05□□□□□ -0.32
SMG9-210ENST00000600097 DYRK1AQ13627 763 aa13.05□□□□□ -0.32
SMG9-210ENST00000600097 HIPK2Q9H2X6 1198 aa13.05□□□□□ -0.32
SMG9-210ENST00000600097 PLGRKTQ9HBL7 147 aa13.05□□□□□ -0.32
SMG9-210ENST00000600097 DNAH1Q9P2D7 4330 aa13.05□□□□□ -0.32
SMG9-210ENST00000600097 FOXI3A8MTJ6 420 aaPredicted RBP13.04□□□□□ -0.32
SMG9-210ENST00000600097 TRBV12-3P01733 135 aa13.04□□□□□ -0.32
SMG9-210ENST00000600097 MECP2P51608 486 aaKnown RBP13.04□□□□□ -0.32
SMG9-210ENST00000600097 TMEM50BP56557 158 aa13.04□□□□□ -0.32
SMG9-210ENST00000600097 TMEM177Q53S58 311 aa13.04□□□□□ -0.32
SMG9-210ENST00000600097 LINC00322Q6ZN03 302 aaPredicted RBP13.04□□□□□ -0.32
SMG9-210ENST00000600097 LAX1Q8IWV1 398 aa13.04□□□□□ -0.32
SMG9-210ENST00000600097 OR4A4PQ8NGN8 299 aa13.04□□□□□ -0.32
SMG9-210ENST00000600097 PHB2Q99623 299 aa13.04□□□□□ -0.32
SMG9-210ENST00000600097 ADAM30Q9UKF2 790 aa13.04□□□□□ -0.32
SMG9-210ENST00000600097 AK6Q9Y3D8 172 aaKnown RBP13.04□□□□□ -0.32
SMG9-210ENST00000600097 V9GY05 133 aa13.04□□□□□ -0.32
SMG9-210ENST00000600097 IZUMO1RA6ND01 250 aa13.03□□□□□ -0.32
SMG9-210ENST00000600097 SLC17A2O00624 439 aa13.03□□□□□ -0.32
SMG9-210ENST00000600097 SHOXO15266 292 aa13.03□□□□□ -0.32
SMG9-210ENST00000600097 TPPPO94811 219 aa13.03□□□□□ -0.32
SMG9-210ENST00000600097 RRASP10301 218 aa13.03□□□□□ -0.32
SMG9-210ENST00000600097 CD81P60033 236 aa13.03□□□□□ -0.32
SMG9-210ENST00000600097 DEFA5Q01523 94 aa13.03□□□□□ -0.32
SMG9-210ENST00000600097 P2RY14Q15391 338 aa13.03□□□□□ -0.32
SMG9-210ENST00000600097 RTL8BQ17RB0 113 aa13.03□□□□□ -0.32
SMG9-210ENST00000600097 C22orf42Q6IC83 251 aa13.03□□□□□ -0.32
SMG9-210ENST00000600097 ARHGAP5-AS1Q96IT6 56 aa13.03□□□□□ -0.32
SMG9-210ENST00000600097 PECRQ9BY49 303 aa13.03□□□□□ -0.32
SMG9-210ENST00000600097 OR2D2Q9H210 308 aa13.03□□□□□ -0.32
SMG9-210ENST00000600097 TXNL4BQ9NX01 149 aaKnown RBP13.03□□□□□ -0.32
SMG9-210ENST00000600097 SLC2A8Q9NY64 477 aa13.03□□□□□ -0.32
SMG9-210ENST00000600097 MSGN1A6NI15 193 aa13.02□□□□□ -0.33
SMG9-210ENST00000600097 FAM223BA6NKX1 122 aa13.02□□□□□ -0.33
SMG9-210ENST00000600097 OR9G9P0C7N8 305 aa13.02□□□□□ -0.33
SMG9-210ENST00000600097 CD36P16671 472 aa13.02□□□□□ -0.33
SMG9-210ENST00000600097 RAB3BP20337 219 aa13.02□□□□□ -0.33
SMG9-210ENST00000600097 MRPS15P82914 257 aaKnown RBP13.02□□□□□ -0.33
SMG9-210ENST00000600097 VMA21Q3ZAQ7 101 aa13.02□□□□□ -0.33
SMG9-210ENST00000600097 TPRA1Q86W33 373 aa13.02□□□□□ -0.33
SMG9-210ENST00000600097 FAM223AQ8IWN6 122 aa13.02□□□□□ -0.33
SMG9-210ENST00000600097 TEX45Q8NA69 505 aa13.02□□□□□ -0.33
SMG9-210ENST00000600097 ADAD2Q8NCV1 583 aaKnown RBP13.02□□□□□ -0.33
SMG9-210ENST00000600097 OR56B1Q8NGI3 324 aa13.02□□□□□ -0.33
SMG9-210ENST00000600097 PLEKHA3Q9HB20 300 aa13.02□□□□□ -0.33
SMG9-210ENST00000600097 RETNQ9HD89 108 aa13.02□□□□□ -0.33
SMG9-210ENST00000600097 SDHAF2Q9NX18 166 aa13.02□□□□□ -0.33
SMG9-210ENST00000600097 FABP7O15540 132 aa13.01□□□□□ -0.33
SMG9-210ENST00000600097 DIRAS3O95661 229 aa13.01□□□□□ -0.33
SMG9-210ENST00000600097 RAB11BQ15907 218 aa13.01□□□□□ -0.33
SMG9-210ENST00000600097 TIMM50Q3ZCQ8 353 aa13.01□□□□□ -0.33
SMG9-210ENST00000600097 OR10J5Q8NHC4 309 aa13.01□□□□□ -0.33
SMG9-210ENST00000600097 GFI1Q99684 422 aa13.01□□□□□ -0.33
SMG9-210ENST00000600097 NEURL2Q9BR09 285 aa13.01□□□□□ -0.33
SMG9-210ENST00000600097 SRRM4A7MD48 611 aaKnown RBP13□□□□□ -0.33
SMG9-210ENST00000600097 BET1O15155 118 aa13□□□□□ -0.33
SMG9-210ENST00000600097 MPPED1O15442 326 aa13□□□□□ -0.33
SMG9-210ENST00000600097 RBMXL2O75526 392 aaKnown RBP13□□□□□ -0.33
SMG9-210ENST00000600097 APELAP0DMC3 54 aa13□□□□□ -0.33
SMG9-210ENST00000600097 UBE2KP61086 200 aa13□□□□□ -0.33
SMG9-210ENST00000600097 RHOGP84095 191 aa13□□□□□ -0.33
SMG9-210ENST00000600097 TNXAQ16473 311 aa13□□□□□ -0.33
SMG9-210ENST00000600097 PRSS8Q16651 343 aa13□□□□□ -0.33
SMG9-210ENST00000600097 CD300EQ496F6 205 aaPredicted RBP13□□□□□ -0.33
SMG9-210ENST00000600097 PLAC9Q5JTB6 97 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms