RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 ZNF645Q8N7E2 425 aa11.14□□□□□ -0.63
IRF3-224ENST00000599680 TSPAN14Q8NG11 270 aa11.14□□□□□ -0.63
IRF3-224ENST00000599680 CASTOR1Q8WTX7 329 aa11.14□□□□□ -0.63
IRF3-224ENST00000599680 MS4A10Q96PG2 267 aa11.14□□□□□ -0.63
IRF3-224ENST00000599680 SLA2Q9H6Q3 261 aa11.14□□□□□ -0.63
IRF3-224ENST00000599680 OR2W1Q9Y3N9 320 aa11.14□□□□□ -0.63
IRF3-224ENST00000599680 AIREO43918 545 aa11.13□□□□□ -0.63
IRF3-224ENST00000599680 SOX15O60248 233 aa11.13□□□□□ -0.63
IRF3-224ENST00000599680 RAMP3O60896 148 aa11.13□□□□□ -0.63
IRF3-224ENST00000599680 CRYZL1O95825 349 aa11.13□□□□□ -0.63
IRF3-224ENST00000599680 LGALS1P09382 135 aaKnown RBP11.13□□□□□ -0.63
IRF3-224ENST00000599680 EGR2P11161 476 aaPredicted RBP11.13□□□□□ -0.63
IRF3-224ENST00000599680 NFYAP23511 347 aaPredicted RBP11.13□□□□□ -0.63
IRF3-224ENST00000599680 DUTP33316 252 aaKnown RBP11.13□□□□□ -0.63
IRF3-224ENST00000599680 KIAA0141Q14154 515 aaPredicted RBP11.13□□□□□ -0.63
IRF3-224ENST00000599680 KCTD9Q7L273 389 aa11.13□□□□□ -0.63
IRF3-224ENST00000599680 CROCCP3Q8IVE0 287 aa11.13□□□□□ -0.63
IRF3-224ENST00000599680 OR5H6Q8NGV6 325 aa11.13□□□□□ -0.63
IRF3-224ENST00000599680 C5orf30Q96GV9 206 aa11.13□□□□□ -0.63
IRF3-224ENST00000599680 PHB2Q99623 299 aa11.13□□□□□ -0.63
IRF3-224ENST00000599680 DCUN1D5Q9BTE7 237 aa11.13□□□□□ -0.63
IRF3-224ENST00000599680 ANXA10Q9UJ72 324 aa11.13□□□□□ -0.63
IRF3-224ENST00000599680 MRPS7Q9Y2R9 242 aaKnown RBP11.13□□□□□ -0.63
IRF3-224ENST00000599680 PRELID3BQ9Y3B1 194 aa11.13□□□□□ -0.63
IRF3-224ENST00000599680 A0A0A6YYH2 397 aa11.12□□□□□ -0.63
IRF3-224ENST00000599680 A6NJ64 397 aa11.12□□□□□ -0.63
IRF3-224ENST00000599680 LINC01619G3V211 115 aa11.12□□□□□ -0.63
IRF3-224ENST00000599680 SSX5O60225 188 aa11.12□□□□□ -0.63
IRF3-224ENST00000599680 TMEM127O75204 238 aa11.12□□□□□ -0.63
IRF3-224ENST00000599680 TUSC2O75896 110 aa11.12□□□□□ -0.63
IRF3-224ENST00000599680 IGLV2-23P01705 113 aa11.12□□□□□ -0.63
IRF3-224ENST00000599680 IGHV3-11P01762 117 aa11.12□□□□□ -0.63
IRF3-224ENST00000599680 TRGV3P03979 118 aa11.12□□□□□ -0.63
IRF3-224ENST00000599680 BEST4Q8NFU0 473 aa11.12□□□□□ -0.63
IRF3-224ENST00000599680 SLC25A38Q96DW6 304 aa11.12□□□□□ -0.63
IRF3-224ENST00000599680 ALX4Q9H161 411 aaPredicted RBP11.12□□□□□ -0.63
IRF3-224ENST00000599680 C13orf42A0A1B0GVH6 325 aa11.11□□□□□ -0.63
IRF3-224ENST00000599680 LINC00473A8K010 186 aa11.11□□□□□ -0.63
IRF3-224ENST00000599680 OVOL1O14753 267 aa11.11□□□□□ -0.63
IRF3-224ENST00000599680 ARPC1BO15143 372 aaKnown RBP11.11□□□□□ -0.63
IRF3-224ENST00000599680 CREBL2O60519 120 aaPredicted RBP11.11□□□□□ -0.63
IRF3-224ENST00000599680 HLA-DQB1P01920 261 aa11.11□□□□□ -0.63
IRF3-224ENST00000599680 ECI1P42126 302 aa11.11□□□□□ -0.63
IRF3-224ENST00000599680 INSL3P51460 131 aa11.11□□□□□ -0.63
IRF3-224ENST00000599680 LSM3P62310 102 aaKnown RBP11.11□□□□□ -0.63
IRF3-224ENST00000599680 PJVKQ0ZLH3 352 aa11.11□□□□□ -0.63
IRF3-224ENST00000599680 TNXAQ16473 311 aa11.11□□□□□ -0.63
IRF3-224ENST00000599680 POC5Q8NA72 575 aa11.11□□□□□ -0.63
IRF3-224ENST00000599680 OR5T1Q8NG75 326 aa11.11□□□□□ -0.63
IRF3-224ENST00000599680 OSR1Q8TAX0 266 aaPredicted RBP11.11□□□□□ -0.63
IRF3-224ENST00000599680 ACOT12Q8WYK0 555 aa11.11□□□□□ -0.63
IRF3-224ENST00000599680 TMEM68Q96MH6 324 aa11.11□□□□□ -0.63
IRF3-224ENST00000599680 SPATA2Q9UM82 520 aa11.11□□□□□ -0.63
IRF3-224ENST00000599680 COL7A1Q02388 2944 aa11.11□□□□□ -0.63
IRF3-224ENST00000599680 DNAH3Q8TD57 4116 aa11.11□□□□□ -0.63
IRF3-224ENST00000599680 TNCP24821 2201 aa11.11□□□□□ -0.63
IRF3-224ENST00000599680 H3BUA1 57 aa11.1□□□□□ -0.63
IRF3-224ENST00000599680 MPPED1O15442 326 aa11.1□□□□□ -0.63
IRF3-224ENST00000599680 FCGR3BO75015 233 aa11.1□□□□□ -0.63
IRF3-224ENST00000599680 ACTL6BO94805 426 aa11.1□□□□□ -0.63
IRF3-224ENST00000599680 CRYGBP07316 175 aa11.1□□□□□ -0.63
IRF3-224ENST00000599680 CBX5P45973 191 aa11.1□□□□□ -0.63
IRF3-224ENST00000599680 UBE2KP61086 200 aa11.1□□□□□ -0.63
IRF3-224ENST00000599680 CD69Q07108 199 aa11.1□□□□□ -0.63
IRF3-224ENST00000599680 OR2B11Q5JQS5 317 aa11.1□□□□□ -0.63
IRF3-224ENST00000599680 TEX45Q8NA69 505 aa11.1□□□□□ -0.63
IRF3-224ENST00000599680 TCTEX1D2Q8WW35 142 aa11.1□□□□□ -0.63
IRF3-224ENST00000599680 DDB2Q92466 427 aa11.1□□□□□ -0.63
IRF3-224ENST00000599680 DCUN1D4Q92564 292 aa11.1□□□□□ -0.63
IRF3-224ENST00000599680 S100A16Q96FQ6 103 aaKnown RBP11.1□□□□□ -0.63
IRF3-224ENST00000599680 AUNIPQ9H7T9 357 aa11.1□□□□□ -0.63
IRF3-224ENST00000599680 IFT46Q9NQC8 304 aa11.1□□□□□ -0.63
IRF3-224ENST00000599680 COA4Q9NYJ1 87 aa11.1□□□□□ -0.63
IRF3-224ENST00000599680 RBMX2Q9Y388 322 aaKnown RBP11.1□□□□□ -0.63
IRF3-224ENST00000599680 IGHV4OR15-8A0A075B7B6 117 aa11.09□□□□□ -0.63
IRF3-224ENST00000599680 A0A087WW49 117 aa11.09□□□□□ -0.63
IRF3-224ENST00000599680 A0A0G2JLM5 398 aa11.09□□□□□ -0.63
IRF3-224ENST00000599680 SRRM4A7MD48 611 aaKnown RBP11.09□□□□□ -0.63
IRF3-224ENST00000599680 SAP30O75446 220 aa11.09□□□□□ -0.63
IRF3-224ENST00000599680 LY86O95711 162 aa11.09□□□□□ -0.63
IRF3-224ENST00000599680 TGFBR1P36897 503 aa11.09□□□□□ -0.63
IRF3-224ENST00000599680 SLURP1P55000 103 aa11.09□□□□□ -0.63
IRF3-224ENST00000599680 UBE2NLQ5JXB2 153 aa11.09□□□□□ -0.63
IRF3-224ENST00000599680 ASPHD1Q5U4P2 390 aa11.09□□□□□ -0.63
IRF3-224ENST00000599680 IDO2Q6ZQW0 420 aa11.09□□□□□ -0.63
IRF3-224ENST00000599680 HOGA1Q86XE5 327 aa11.09□□□□□ -0.63
IRF3-224ENST00000599680 GVQW1Q8N7I0 195 aa11.09□□□□□ -0.63
IRF3-224ENST00000599680 SECTM1Q8WVN6 248 aa11.09□□□□□ -0.63
IRF3-224ENST00000599680 YIPF6Q96EC8 236 aa11.09□□□□□ -0.63
IRF3-224ENST00000599680 PRR25Q96S07 402 aa11.09□□□□□ -0.63
IRF3-224ENST00000599680 HSD17B10Q99714 261 aaKnown RBP11.09□□□□□ -0.63
IRF3-224ENST00000599680 SORL1Q92673 2214 aa11.09□□□□□ -0.63
IRF3-224ENST00000599680 IGKV1D-13A0A0B4J2D9 117 aa11.08□□□□□ -0.64
IRF3-224ENST00000599680 HSPB1P04792 205 aaKnown RBP11.08□□□□□ -0.64
IRF3-224ENST00000599680 FCER2P06734 321 aa11.08□□□□□ -0.64
IRF3-224ENST00000599680 APELAP0DMC3 54 aa11.08□□□□□ -0.64
IRF3-224ENST00000599680 IGKV1-13P0DP09 117 aa11.08□□□□□ -0.64
IRF3-224ENST00000599680 FCGR2CP31995 323 aa11.08□□□□□ -0.64
IRF3-224ENST00000599680 RPS19P39019 145 aaKnown RBP11.08□□□□□ -0.64
IRF3-224ENST00000599680 CDK10Q15131 360 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms