RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 ZNF355PQ9NSJ1 428 aa11.38□□□□□ -0.59
XRCC1-208ENST00000598422 ANXA10Q9UJ72 324 aa11.38□□□□□ -0.59
XRCC1-208ENST00000598422 I3L521 148 aa11.37□□□□□ -0.59
XRCC1-208ENST00000598422 K7EIL1 84 aa11.37□□□□□ -0.59
XRCC1-208ENST00000598422 SOX15O60248 233 aa11.37□□□□□ -0.59
XRCC1-208ENST00000598422 SLC22A5O76082 557 aa11.37□□□□□ -0.59
XRCC1-208ENST00000598422 CRYZL1O95825 349 aa11.37□□□□□ -0.59
XRCC1-208ENST00000598422 EGR2P11161 476 aaPredicted RBP11.37□□□□□ -0.59
XRCC1-208ENST00000598422 DUTP33316 252 aaKnown RBP11.37□□□□□ -0.59
XRCC1-208ENST00000598422 DGCR2P98153 550 aa11.37□□□□□ -0.59
XRCC1-208ENST00000598422 RUNX1Q01196 453 aa11.37□□□□□ -0.59
XRCC1-208ENST00000598422 DCTN2Q13561 401 aaKnown RBP11.37□□□□□ -0.59
XRCC1-208ENST00000598422 AKIRIN2Q53H80 203 aa11.37□□□□□ -0.59
XRCC1-208ENST00000598422 TMEM177Q53S58 311 aa11.37□□□□□ -0.59
XRCC1-208ENST00000598422 DEFB121Q5J5C9 76 aa11.37□□□□□ -0.59
XRCC1-208ENST00000598422 KCTD9Q7L273 389 aa11.37□□□□□ -0.59
XRCC1-208ENST00000598422 MS4A10Q96PG2 267 aa11.37□□□□□ -0.59
XRCC1-208ENST00000598422 DCUN1D5Q9BTE7 237 aa11.37□□□□□ -0.59
XRCC1-208ENST00000598422 MRPS7Q9Y2R9 242 aaKnown RBP11.37□□□□□ -0.59
XRCC1-208ENST00000598422 PRELID3BQ9Y3B1 194 aa11.37□□□□□ -0.59
XRCC1-208ENST00000598422 NUBP2Q9Y5Y2 271 aa11.37□□□□□ -0.59
XRCC1-208ENST00000598422 WI2-2373I1.2A0A1W2PRP0 233 aa11.36□□□□□ -0.59
XRCC1-208ENST00000598422 SSX5O60225 188 aa11.36□□□□□ -0.59
XRCC1-208ENST00000598422 CREBL2O60519 120 aaPredicted RBP11.36□□□□□ -0.59
XRCC1-208ENST00000598422 TUSC2O75896 110 aa11.36□□□□□ -0.59
XRCC1-208ENST00000598422 IGLV2-23P01705 113 aa11.36□□□□□ -0.59
XRCC1-208ENST00000598422 LGALS1P09382 135 aaKnown RBP11.36□□□□□ -0.59
XRCC1-208ENST00000598422 KIAA0141Q14154 515 aaPredicted RBP11.36□□□□□ -0.59
XRCC1-208ENST00000598422 BEST4Q8NFU0 473 aa11.36□□□□□ -0.59
XRCC1-208ENST00000598422 SLA2Q9H6Q3 261 aa11.36□□□□□ -0.59
XRCC1-208ENST00000598422 SPATA2Q9UM82 520 aa11.36□□□□□ -0.59
XRCC1-208ENST00000598422 ARPC1BO15143 372 aaKnown RBP11.35□□□□□ -0.59
XRCC1-208ENST00000598422 RAMP3O60896 148 aa11.35□□□□□ -0.59
XRCC1-208ENST00000598422 FCGR3BO75015 233 aa11.35□□□□□ -0.59
XRCC1-208ENST00000598422 IGHV3-11P01762 117 aa11.35□□□□□ -0.59
XRCC1-208ENST00000598422 HLA-DQB1P01920 261 aa11.35□□□□□ -0.59
XRCC1-208ENST00000598422 TRGV3P03979 118 aa11.35□□□□□ -0.59
XRCC1-208ENST00000598422 UBE2KP61086 200 aa11.35□□□□□ -0.59
XRCC1-208ENST00000598422 LSM3P62310 102 aaKnown RBP11.35□□□□□ -0.59
XRCC1-208ENST00000598422 OR2B11Q5JQS5 317 aa11.35□□□□□ -0.59
XRCC1-208ENST00000598422 POC5Q8NA72 575 aa11.35□□□□□ -0.59
XRCC1-208ENST00000598422 OSR1Q8TAX0 266 aaPredicted RBP11.35□□□□□ -0.59
XRCC1-208ENST00000598422 YIPF6Q96EC8 236 aa11.35□□□□□ -0.59
XRCC1-208ENST00000598422 PHB2Q99623 299 aa11.35□□□□□ -0.59
XRCC1-208ENST00000598422 ALX4Q9H161 411 aaPredicted RBP11.35□□□□□ -0.59
XRCC1-208ENST00000598422 AUNIPQ9H7T9 357 aa11.35□□□□□ -0.59
XRCC1-208ENST00000598422 RBMX2Q9Y388 322 aaKnown RBP11.35□□□□□ -0.59
XRCC1-208ENST00000598422 LINC00473A8K010 186 aa11.34□□□□□ -0.59
XRCC1-208ENST00000598422 LINC01619G3V211 115 aa11.34□□□□□ -0.59
XRCC1-208ENST00000598422 MPPED1O15442 326 aa11.34□□□□□ -0.59
XRCC1-208ENST00000598422 ACTL6BO94805 426 aa11.34□□□□□ -0.59
XRCC1-208ENST00000598422 CRYGBP07316 175 aa11.34□□□□□ -0.59
XRCC1-208ENST00000598422 CBX5P45973 191 aa11.34□□□□□ -0.59
XRCC1-208ENST00000598422 PJVKQ0ZLH3 352 aa11.34□□□□□ -0.59
XRCC1-208ENST00000598422 UBE2NLQ5JXB2 153 aa11.34□□□□□ -0.59
XRCC1-208ENST00000598422 OR5T1Q8NG75 326 aa11.34□□□□□ -0.59
XRCC1-208ENST00000598422 TCTEX1D2Q8WW35 142 aa11.34□□□□□ -0.59
XRCC1-208ENST00000598422 ACOT12Q8WYK0 555 aa11.34□□□□□ -0.59
XRCC1-208ENST00000598422 DDB2Q92466 427 aa11.34□□□□□ -0.59
XRCC1-208ENST00000598422 S100A16Q96FQ6 103 aaKnown RBP11.34□□□□□ -0.59
XRCC1-208ENST00000598422 TMEM68Q96MH6 324 aa11.34□□□□□ -0.59
XRCC1-208ENST00000598422 HSD17B10Q99714 261 aaKnown RBP11.34□□□□□ -0.59
XRCC1-208ENST00000598422 IFT46Q9NQC8 304 aa11.34□□□□□ -0.59
XRCC1-208ENST00000598422 TGP01266 2768 aa11.33□□□□□ -0.59
XRCC1-208ENST00000598422 IGKV1D-13A0A0B4J2D9 117 aa11.33□□□□□ -0.6
XRCC1-208ENST00000598422 C13orf42A0A1B0GVH6 325 aa11.33□□□□□ -0.6
XRCC1-208ENST00000598422 SRRM4A7MD48 611 aaKnown RBP11.33□□□□□ -0.6
XRCC1-208ENST00000598422 H3BUA1 57 aa11.33□□□□□ -0.6
XRCC1-208ENST00000598422 OVOL1O14753 267 aa11.33□□□□□ -0.6
XRCC1-208ENST00000598422 FCER2P06734 321 aa11.33□□□□□ -0.6
XRCC1-208ENST00000598422 IGKV1-13P0DP09 117 aa11.33□□□□□ -0.6
XRCC1-208ENST00000598422 TGFBR1P36897 503 aa11.33□□□□□ -0.6
XRCC1-208ENST00000598422 ECI1P42126 302 aa11.33□□□□□ -0.6
XRCC1-208ENST00000598422 TNXAQ16473 311 aa11.33□□□□□ -0.6
XRCC1-208ENST00000598422 TMEM69Q5SWH9 247 aa11.33□□□□□ -0.6
XRCC1-208ENST00000598422 ASPHD1Q5U4P2 390 aa11.33□□□□□ -0.6
XRCC1-208ENST00000598422 IDO2Q6ZQW0 420 aa11.33□□□□□ -0.6
XRCC1-208ENST00000598422 HOGA1Q86XE5 327 aa11.33□□□□□ -0.6
XRCC1-208ENST00000598422 GVQW1Q8N7I0 195 aa11.33□□□□□ -0.6
XRCC1-208ENST00000598422 SAMD12Q8N8I0 201 aa11.33□□□□□ -0.6
XRCC1-208ENST00000598422 TEX45Q8NA69 505 aa11.33□□□□□ -0.6
XRCC1-208ENST00000598422 OR13F1Q8NGS4 319 aa11.33□□□□□ -0.6
XRCC1-208ENST00000598422 OR4S2Q8NH73 311 aa11.33□□□□□ -0.6
XRCC1-208ENST00000598422 DCUN1D4Q92564 292 aa11.33□□□□□ -0.6
XRCC1-208ENST00000598422 TAS2R8Q9NYW2 309 aa11.33□□□□□ -0.6
XRCC1-208ENST00000598422 A0A0G2JLM5 398 aa11.32□□□□□ -0.6
XRCC1-208ENST00000598422 XRCC3O43542 346 aa11.32□□□□□ -0.6
XRCC1-208ENST00000598422 SAA1P0DJI8 122 aaPredicted RBP11.32□□□□□ -0.6
XRCC1-208ENST00000598422 AADACP22760 399 aa11.32□□□□□ -0.6
XRCC1-208ENST00000598422 FCGR2CP31995 323 aa11.32□□□□□ -0.6
XRCC1-208ENST00000598422 RPS19P39019 145 aaKnown RBP11.32□□□□□ -0.6
XRCC1-208ENST00000598422 INSL3P51460 131 aa11.32□□□□□ -0.6
XRCC1-208ENST00000598422 SLURP1P55000 103 aa11.32□□□□□ -0.6
XRCC1-208ENST00000598422 PRSS8Q16651 343 aa11.32□□□□□ -0.6
XRCC1-208ENST00000598422 OVCH2Q7RTZ1 564 aa11.32□□□□□ -0.6
XRCC1-208ENST00000598422 SECTM1Q8WVN6 248 aa11.32□□□□□ -0.6
XRCC1-208ENST00000598422 COA4Q9NYJ1 87 aa11.32□□□□□ -0.6
XRCC1-208ENST00000598422 IGHV4OR15-8A0A075B7B6 117 aa11.31□□□□□ -0.6
XRCC1-208ENST00000598422 A0A087WW49 117 aa11.31□□□□□ -0.6
XRCC1-208ENST00000598422 MEIS3P1A6NDR6 274 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms