RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 RRHO14718 337 aa16.1■□□□□ 0.17
PNKP-211ENST00000598020 ZNF735P0CB33 412 aa16.1■□□□□ 0.17
PNKP-211ENST00000598020 AKAIN1P0CW23 69 aa16.1■□□□□ 0.17
PNKP-211ENST00000598020 VDAC2P45880 294 aaPredicted RBP16.1■□□□□ 0.17
PNKP-211ENST00000598020 RPS16P62249 146 aaKnown RBP16.1■□□□□ 0.17
PNKP-211ENST00000598020 OSR1Q8TAX0 266 aaPredicted RBP16.1■□□□□ 0.17
PNKP-211ENST00000598020 TRIM63Q969Q1 353 aa16.1■□□□□ 0.17
PNKP-211ENST00000598020 SRRQ9GZT4 340 aa16.1■□□□□ 0.17
PNKP-211ENST00000598020 GPR31O00270 319 aa16.09■□□□□ 0.17
PNKP-211ENST00000598020 HLA-DRB1P01911 266 aa16.09■□□□□ 0.17
PNKP-211ENST00000598020 KIR2DS2P43631 304 aa16.09■□□□□ 0.17
PNKP-211ENST00000598020 BRWD1-AS2P59051 145 aa16.09■□□□□ 0.17
PNKP-211ENST00000598020 PSG5Q15238 335 aa16.09■□□□□ 0.17
PNKP-211ENST00000598020 C9orf152Q5JTZ5 239 aa16.09■□□□□ 0.17
PNKP-211ENST00000598020 GDPD1Q8N9F7 314 aa16.09■□□□□ 0.17
PNKP-211ENST00000598020 TERB2Q8NHR7 220 aa16.09■□□□□ 0.17
PNKP-211ENST00000598020 WIPF2Q8TF74 440 aaPredicted RBP16.09■□□□□ 0.17
PNKP-211ENST00000598020 RSRP1Q9BUV0 290 aa16.09■□□□□ 0.17
PNKP-211ENST00000598020 RBFOX2O43251 390 aaKnown RBP eCLIP16.08■□□□□ 0.16
PNKP-211ENST00000598020 KCNAB3O43448 404 aa16.08■□□□□ 0.16
PNKP-211ENST00000598020 FCGR3BO75015 233 aa16.08■□□□□ 0.16
PNKP-211ENST00000598020 IGLV2-23P01705 113 aa16.08■□□□□ 0.16
PNKP-211ENST00000598020 ZNF45Q02386 682 aa16.08■□□□□ 0.16
PNKP-211ENST00000598020 CATR1Q13166 79 aa16.08■□□□□ 0.16
PNKP-211ENST00000598020 ARSJQ5FYB0 599 aaPredicted RBP16.08■□□□□ 0.16
PNKP-211ENST00000598020 LIN54Q6MZP7 749 aa16.08■□□□□ 0.16
PNKP-211ENST00000598020 SHISA2Q6UWI4 295 aa16.08■□□□□ 0.16
PNKP-211ENST00000598020 CMTM1Q8IZ96 169 aa16.08■□□□□ 0.16
PNKP-211ENST00000598020 SLC38A6Q8IZM9 456 aa16.08■□□□□ 0.16
PNKP-211ENST00000598020 OR4C16Q8NGL9 310 aa16.08■□□□□ 0.16
PNKP-211ENST00000598020 TCTEX1D2Q8WW35 142 aa16.08■□□□□ 0.16
PNKP-211ENST00000598020 DEDD2Q8WXF8 326 aa16.08■□□□□ 0.16
PNKP-211ENST00000598020 ZNF580Q9UK33 172 aa16.08■□□□□ 0.16
PNKP-211ENST00000598020 PLXNB1O43157 2135 aa16.07■□□□□ 0.16
PNKP-211ENST00000598020 DISC1C4P0D8 188 aa16.07■□□□□ 0.16
PNKP-211ENST00000598020 HAX1O00165 279 aa16.07■□□□□ 0.16
PNKP-211ENST00000598020 TNFSF12O43508 249 aa16.07■□□□□ 0.16
PNKP-211ENST00000598020 PGLYRP1O75594 196 aaPredicted RBP16.07■□□□□ 0.16
PNKP-211ENST00000598020 CRYZL1O95825 349 aa16.07■□□□□ 0.16
PNKP-211ENST00000598020 KLF9Q13886 244 aaPredicted RBP16.07■□□□□ 0.16
PNKP-211ENST00000598020 TMEM95Q3KNT9 176 aa16.07■□□□□ 0.16
PNKP-211ENST00000598020 SLC35E3Q7Z769 313 aa16.07■□□□□ 0.16
PNKP-211ENST00000598020 KLHDC1Q8N7A1 406 aa16.07■□□□□ 0.16
PNKP-211ENST00000598020 OR4S2Q8NH73 311 aa16.07■□□□□ 0.16
PNKP-211ENST00000598020 HARBI1Q96MB7 349 aa16.07■□□□□ 0.16
PNKP-211ENST00000598020 GPHA2Q96T91 129 aa16.07■□□□□ 0.16
PNKP-211ENST00000598020 FBXL15Q9H469 300 aa16.07■□□□□ 0.16
PNKP-211ENST00000598020 PTTG2Q9NZH5 202 aa16.07■□□□□ 0.16
PNKP-211ENST00000598020 SRRM4A7MD48 611 aaKnown RBP16.06■□□□□ 0.16
PNKP-211ENST00000598020 SHOXO15266 292 aa16.06■□□□□ 0.16
PNKP-211ENST00000598020 CRYGBP07316 175 aa16.06■□□□□ 0.16
PNKP-211ENST00000598020 ECI1P42126 302 aa16.06■□□□□ 0.16
PNKP-211ENST00000598020 AP3S2P59780 193 aa16.06■□□□□ 0.16
PNKP-211ENST00000598020 KRTAP10-3P60369 221 aa16.06■□□□□ 0.16
PNKP-211ENST00000598020 ZNF486Q96H40 463 aaPredicted RBP16.06■□□□□ 0.16
PNKP-211ENST00000598020 CITED1Q99966 193 aa16.06■□□□□ 0.16
PNKP-211ENST00000598020 SLC2A8Q9NY64 477 aa16.06■□□□□ 0.16
PNKP-211ENST00000598020 METTL1Q9UBP6 276 aaKnown RBP16.06■□□□□ 0.16
PNKP-211ENST00000598020 PEX14O75381 377 aa16.05■□□□□ 0.16
PNKP-211ENST00000598020 VSIG10L2P0DP72 767 aa16.05■□□□□ 0.16
PNKP-211ENST00000598020 S100GP29377 79 aa16.05■□□□□ 0.16
PNKP-211ENST00000598020 UBE2KP61086 200 aa16.05■□□□□ 0.16
PNKP-211ENST00000598020 FAAP20Q6NZ36 180 aa16.05■□□□□ 0.16
PNKP-211ENST00000598020 FOXRED2Q8IWF2 684 aa16.05■□□□□ 0.16
PNKP-211ENST00000598020 TOMM5Q8N4H5 51 aa16.05■□□□□ 0.16
PNKP-211ENST00000598020 TCTEX1D1Q8N7M0 179 aa16.05■□□□□ 0.16
PNKP-211ENST00000598020 TEX45Q8NA69 505 aa16.05■□□□□ 0.16
PNKP-211ENST00000598020 CD300LFQ8TDQ1 290 aa16.05■□□□□ 0.16
PNKP-211ENST00000598020 SDHCQ99643 169 aaPredicted RBP16.05■□□□□ 0.16
PNKP-211ENST00000598020 PRRT1Q99946 306 aa16.05■□□□□ 0.16
PNKP-211ENST00000598020 HSPB9Q9BQS6 159 aa16.05■□□□□ 0.16
PNKP-211ENST00000598020 IGHV7-81A0A0B4J1V7 117 aa16.04■□□□□ 0.16
PNKP-211ENST00000598020 LINC01548A6NM66 108 aa16.04■□□□□ 0.16
PNKP-211ENST00000598020 AP4M1O00189 453 aa16.04■□□□□ 0.16
PNKP-211ENST00000598020 SLC25A17O43808 307 aa16.04■□□□□ 0.16
PNKP-211ENST00000598020 IGF1P05019 195 aa16.04■□□□□ 0.16
PNKP-211ENST00000598020 RND3P61587 244 aa16.04■□□□□ 0.16
PNKP-211ENST00000598020 SURF2Q15527 256 aaPredicted RBP16.04■□□□□ 0.16
PNKP-211ENST00000598020 VMA21Q3ZAQ7 101 aa16.04■□□□□ 0.16
PNKP-211ENST00000598020 SCGB2B2Q4G0G5 96 aa16.04■□□□□ 0.16
PNKP-211ENST00000598020 OR2B11Q5JQS5 317 aa16.04■□□□□ 0.16
PNKP-211ENST00000598020 SPAG16Q8N0X2 631 aa16.04■□□□□ 0.16
PNKP-211ENST00000598020 CHPT1Q8WUD6 406 aa16.04■□□□□ 0.16
PNKP-211ENST00000598020 MRGPRFQ96AM1 343 aa16.04■□□□□ 0.16
PNKP-211ENST00000598020 AKIP1Q9NQ31 210 aa16.04■□□□□ 0.16
PNKP-211ENST00000598020 FAM212BQ9NTI7 297 aaPredicted RBP16.04■□□□□ 0.16
PNKP-211ENST00000598020 TNCP24821 2201 aa16.04■□□□□ 0.16
PNKP-211ENST00000598020 FCN1O00602 326 aa16.03■□□□□ 0.16
PNKP-211ENST00000598020 FAUP35544 74 aaKnown RBP16.03■□□□□ 0.16
PNKP-211ENST00000598020 PLGLAQ15195 96 aa16.03■□□□□ 0.16
PNKP-211ENST00000598020 ZNF562Q6V9R5 426 aa16.03■□□□□ 0.16
PNKP-211ENST00000598020 PPP1R27Q86WC6 154 aa16.03■□□□□ 0.16
PNKP-211ENST00000598020 POC5Q8NA72 575 aa16.03■□□□□ 0.16
PNKP-211ENST00000598020 OR51S1Q8NGJ8 323 aa16.03■□□□□ 0.16
PNKP-211ENST00000598020 OR51H1Q8NH63 302 aa16.03■□□□□ 0.16
PNKP-211ENST00000598020 ZFAND1Q8TCF1 268 aa16.03■□□□□ 0.16
PNKP-211ENST00000598020 OR51J1Q9H342 316 aa16.03■□□□□ 0.16
PNKP-211ENST00000598020 SLC2A9Q9NRM0 540 aa16.03■□□□□ 0.16
PNKP-211ENST00000598020 SCP2D1Q9UJQ7 156 aa16.03■□□□□ 0.16
PNKP-211ENST00000598020 RAMP3O60896 148 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms