RNA–Protein interactions for RNA: ENST00000597641.1

PRKD2-210, Transcript of protein kinase D2, human

TSL 4

Gene PRKD2, Length 456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD2-210	ENST00000597641	IGKV1D-8	A0A087WSZ0	117 aa		11.44	□□□□□ -0.58
PRKD2-210	ENST00000597641	TMEM272	A0A1B0GTI8	110 aa		11.44	□□□□□ -0.58
PRKD2-210	ENST00000597641	LINC00473	A8K010	186 aa		11.44	□□□□□ -0.58
PRKD2-210	ENST00000597641	BET1	O15155	118 aa		11.44	□□□□□ -0.58
PRKD2-210	ENST00000597641	FABP7	O15540	132 aa		11.44	□□□□□ -0.58
PRKD2-210	ENST00000597641	MED22	Q15528	200 aa		11.44	□□□□□ -0.58
PRKD2-210	ENST00000597641	C2orf76	Q3KRA6	126 aa		11.44	□□□□□ -0.58
PRKD2-210	ENST00000597641	CD300E	Q496F6	205 aa	Predicted RBP	11.44	□□□□□ -0.58
PRKD2-210	ENST00000597641	C10orf55	Q5SWW7	151 aa		11.44	□□□□□ -0.58
PRKD2-210	ENST00000597641	OGFRL1	Q5TC84	451 aa	Predicted RBP	11.44	□□□□□ -0.58
PRKD2-210	ENST00000597641	C19orf35	Q6ZS72	473 aa		11.44	□□□□□ -0.58
PRKD2-210	ENST00000597641	DEFB125	Q8N687	156 aa		11.44	□□□□□ -0.58
PRKD2-210	ENST00000597641	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	11.44	□□□□□ -0.58
PRKD2-210	ENST00000597641	DDB2	Q92466	427 aa		11.44	□□□□□ -0.58
PRKD2-210	ENST00000597641	CABLES2	Q9BTV7	478 aa		11.44	□□□□□ -0.58
PRKD2-210	ENST00000597641	PLGRKT	Q9HBL7	147 aa		11.44	□□□□□ -0.58
PRKD2-210	ENST00000597641	AKIP1	Q9NQ31	210 aa		11.44	□□□□□ -0.58
PRKD2-210	ENST00000597641	SIGLEC8	Q9NYZ4	499 aa		11.44	□□□□□ -0.58
PRKD2-210	ENST00000597641	ZNF230	Q9UIE0	474 aa	Predicted RBP	11.44	□□□□□ -0.58
PRKD2-210	ENST00000597641	DMRT1	Q9Y5R6	373 aa		11.44	□□□□□ -0.58
PRKD2-210	ENST00000597641	CEPT1	Q9Y6K0	416 aa		11.44	□□□□□ -0.58
PRKD2-210	ENST00000597641	TRBV6-7	A0A0A0MS04	114 aa		11.43	□□□□□ -0.58
PRKD2-210	ENST00000597641	SHOX	O15266	292 aa		11.43	□□□□□ -0.58
PRKD2-210	ENST00000597641	LGALS7	P47929	136 aa		11.43	□□□□□ -0.58
PRKD2-210	ENST00000597641	TAGLN	Q01995	201 aa	Known RBP	11.43	□□□□□ -0.58
PRKD2-210	ENST00000597641	RAB11B	Q15907	218 aa		11.43	□□□□□ -0.58
PRKD2-210	ENST00000597641	RPEL1	Q2QD12	228 aa		11.43	□□□□□ -0.58
PRKD2-210	ENST00000597641		Q8N402	240 aa		11.43	□□□□□ -0.58
PRKD2-210	ENST00000597641	OR4A4P	Q8NGN8	299 aa		11.43	□□□□□ -0.58
PRKD2-210	ENST00000597641	FAM3D	Q96BQ1	224 aa		11.43	□□□□□ -0.58
PRKD2-210	ENST00000597641	MGAT4A	Q9UM21	535 aa		11.43	□□□□□ -0.58
PRKD2-210	ENST00000597641	SHISA3	A0PJX4	238 aa		11.42	□□□□□ -0.58
PRKD2-210	ENST00000597641	HLA-A	P01891	365 aa	Known RBP	11.42	□□□□□ -0.58
PRKD2-210	ENST00000597641	FCGR3A	P08637	254 aa		11.42	□□□□□ -0.58
PRKD2-210	ENST00000597641	OR9G9	P0C7N8	305 aa		11.42	□□□□□ -0.58
PRKD2-210	ENST00000597641	AADAC	P22760	399 aa		11.42	□□□□□ -0.58
PRKD2-210	ENST00000597641	CD81	P60033	236 aa		11.42	□□□□□ -0.58
PRKD2-210	ENST00000597641	RHOG	P84095	191 aa		11.42	□□□□□ -0.58
PRKD2-210	ENST00000597641	PRSS8	Q16651	343 aa		11.42	□□□□□ -0.58
PRKD2-210	ENST00000597641	LCN12	Q6JVE5	192 aa		11.42	□□□□□ -0.58
PRKD2-210	ENST00000597641	GTSCR1	Q86UQ5	136 aa		11.42	□□□□□ -0.58
PRKD2-210	ENST00000597641	SRSF12	Q8WXF0	261 aa	Known RBP	11.42	□□□□□ -0.58
PRKD2-210	ENST00000597641	USMG5	Q96IX5	58 aa		11.42	□□□□□ -0.58
PRKD2-210	ENST00000597641	TMEM68	Q96MH6	324 aa		11.42	□□□□□ -0.58
PRKD2-210	ENST00000597641	C8orf4	Q9NR00	106 aa		11.42	□□□□□ -0.58
PRKD2-210	ENST00000597641	ELF5	Q9UKW6	265 aa	Predicted RBP	11.42	□□□□□ -0.58
PRKD2-210	ENST00000597641	TRBV9	A0A0B4J1U6	114 aa		11.41	□□□□□ -0.58
PRKD2-210	ENST00000597641	PPP5D1	E7EU14	171 aa		11.41	□□□□□ -0.58
PRKD2-210	ENST00000597641	CASQ2	O14958	399 aa	Predicted RBP	11.41	□□□□□ -0.58
PRKD2-210	ENST00000597641	OR2A4	O95047	310 aa		11.41	□□□□□ -0.58
PRKD2-210	ENST00000597641	CRYZL1	O95825	349 aa		11.41	□□□□□ -0.58
PRKD2-210	ENST00000597641	IFNA6	P05013	189 aa		11.41	□□□□□ -0.58
PRKD2-210	ENST00000597641	GNB3	P16520	340 aa		11.41	□□□□□ -0.58
PRKD2-210	ENST00000597641	DUT	P33316	252 aa	Known RBP	11.41	□□□□□ -0.58
PRKD2-210	ENST00000597641	FABP5	Q01469	135 aa		11.41	□□□□□ -0.58
PRKD2-210	ENST00000597641	TPBG	Q13641	420 aa		11.41	□□□□□ -0.58
PRKD2-210	ENST00000597641	EXOSC2	Q13868	293 aa	Known RBP	11.41	□□□□□ -0.58
PRKD2-210	ENST00000597641	TNXA	Q16473	311 aa		11.41	□□□□□ -0.58
PRKD2-210	ENST00000597641	HES5	Q5TA89	166 aa		11.41	□□□□□ -0.58
PRKD2-210	ENST00000597641	PHB2	Q99623	299 aa		11.41	□□□□□ -0.58
PRKD2-210	ENST00000597641	NEURL2	Q9BR09	285 aa		11.41	□□□□□ -0.58
PRKD2-210	ENST00000597641	ZNF430	Q9H8G1	570 aa	Predicted RBP	11.41	□□□□□ -0.58
PRKD2-210	ENST00000597641		A0A0B4J203	849 aa		11.4	□□□□□ -0.58
PRKD2-210	ENST00000597641		A0A1B0GW64	132 aa		11.4	□□□□□ -0.58
PRKD2-210	ENST00000597641		E7EUB6	86 aa		11.4	□□□□□ -0.58
PRKD2-210	ENST00000597641	MFNG	O00587	321 aa		11.4	□□□□□ -0.58
PRKD2-210	ENST00000597641	DENR	O43583	198 aa	Known RBP	11.4	□□□□□ -0.58
PRKD2-210	ENST00000597641	OR10A3	P58181	314 aa		11.4	□□□□□ -0.58
PRKD2-210	ENST00000597641	UBE2K	P61086	200 aa		11.4	□□□□□ -0.58
PRKD2-210	ENST00000597641	DEFB114	Q30KQ6	69 aa		11.4	□□□□□ -0.58
PRKD2-210	ENST00000597641	TEX45	Q8NA69	505 aa		11.4	□□□□□ -0.58
PRKD2-210	ENST00000597641	OR56B1	Q8NGI3	324 aa		11.4	□□□□□ -0.58
PRKD2-210	ENST00000597641	CACNG8	Q8WXS5	425 aa		11.4	□□□□□ -0.58
PRKD2-210	ENST00000597641	UFD1	Q92890	307 aa		11.4	□□□□□ -0.58
PRKD2-210	ENST00000597641	SNAPC3	Q92966	411 aa		11.4	□□□□□ -0.58
PRKD2-210	ENST00000597641	VPS13D	Q5THJ4	4388 aa		11.39	□□□□□ -0.59
PRKD2-210	ENST00000597641		A0A075B6Q4	140 aa		11.39	□□□□□ -0.59
PRKD2-210	ENST00000597641	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	11.39	□□□□□ -0.59
PRKD2-210	ENST00000597641	HMX3	A6NHT5	357 aa		11.39	□□□□□ -0.59
PRKD2-210	ENST00000597641		J3QRK9	145 aa		11.39	□□□□□ -0.59
PRKD2-210	ENST00000597641	RAB27B	O00194	218 aa		11.39	□□□□□ -0.59
PRKD2-210	ENST00000597641	EBAG9	O00559	213 aa		11.39	□□□□□ -0.59
PRKD2-210	ENST00000597641	HSMCR30	P0CW71	290 aa		11.39	□□□□□ -0.59
PRKD2-210	ENST00000597641	SAA1	P0DJI8	122 aa	Predicted RBP	11.39	□□□□□ -0.59
PRKD2-210	ENST00000597641	CALR	P27797	417 aa	Known RBP	11.39	□□□□□ -0.59
PRKD2-210	ENST00000597641	SERPINB10	P48595	397 aa		11.39	□□□□□ -0.59
PRKD2-210	ENST00000597641	RPL30	P62888	115 aa	Known RBP	11.39	□□□□□ -0.59
PRKD2-210	ENST00000597641	H1FOO	Q8IZA3	346 aa	Predicted RBP	11.39	□□□□□ -0.59
PRKD2-210	ENST00000597641	OR10J5	Q8NHC4	309 aa		11.39	□□□□□ -0.59
PRKD2-210	ENST00000597641	ACOT12	Q8WYK0	555 aa		11.39	□□□□□ -0.59
PRKD2-210	ENST00000597641	RAB3C	Q96E17	227 aa		11.39	□□□□□ -0.59
PRKD2-210	ENST00000597641	WDR89	Q96FK6	387 aa	Predicted RBP	11.39	□□□□□ -0.59
PRKD2-210	ENST00000597641	C2orf70	A6NJV1	201 aa		11.38	□□□□□ -0.59
PRKD2-210	ENST00000597641	OR2J3	O76001	311 aa		11.38	□□□□□ -0.59
PRKD2-210	ENST00000597641	IGLV2-14	P01704	120 aa		11.38	□□□□□ -0.59
PRKD2-210	ENST00000597641	IGHV3-23	P01764	117 aa		11.38	□□□□□ -0.59
PRKD2-210	ENST00000597641	MAP2K4	P45985	399 aa		11.38	□□□□□ -0.59
PRKD2-210	ENST00000597641	TATDN3	Q17R31	274 aa		11.38	□□□□□ -0.59
PRKD2-210	ENST00000597641	RTL8B	Q17RB0	113 aa		11.38	□□□□□ -0.59
PRKD2-210	ENST00000597641	VKORC1L1	Q8N0U8	176 aa		11.38	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms