RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 TAGLNQ01995 201 aaKnown RBP8.74□□□□□ -1.01
LIG1-211ENST00000596457 MFSD4AQ8N468 514 aa8.74□□□□□ -1.01
LIG1-211ENST00000596457 OR6F1Q8NGZ6 308 aa8.74□□□□□ -1.01
LIG1-211ENST00000596457 C15orf40Q8WUR7 153 aa8.74□□□□□ -1.01
LIG1-211ENST00000596457 RNF5Q99942 180 aa8.74□□□□□ -1.01
LIG1-211ENST00000596457 RBM38Q9H0Z9 239 aaKnown RBP8.74□□□□□ -1.01
LIG1-211ENST00000596457 A3GALT2U3KPV4 340 aa8.74□□□□□ -1.01
LIG1-211ENST00000596457 TENM1Q9UKZ4 2725 aa8.74□□□□□ -1.01
LIG1-211ENST00000596457 IGHV7-81A0A0B4J1V7 117 aa8.73□□□□□ -1.01
LIG1-211ENST00000596457 FABP12A6NFH5 140 aa8.73□□□□□ -1.01
LIG1-211ENST00000596457 ATP6V0E1O15342 81 aa8.73□□□□□ -1.01
LIG1-211ENST00000596457 TSPAN15O95858 294 aa8.73□□□□□ -1.01
LIG1-211ENST00000596457 CA2P00918 260 aa8.73□□□□□ -1.01
LIG1-211ENST00000596457 HLA-DRB1P01911 266 aa8.73□□□□□ -1.01
LIG1-211ENST00000596457 IFNA6P05013 189 aa8.73□□□□□ -1.01
LIG1-211ENST00000596457 LGALS7P47929 136 aa8.73□□□□□ -1.01
LIG1-211ENST00000596457 ECSCRQ19T08 205 aa8.73□□□□□ -1.01
LIG1-211ENST00000596457 C2orf68Q2NKX9 166 aa8.73□□□□□ -1.01
LIG1-211ENST00000596457 TMEM177Q53S58 311 aa8.73□□□□□ -1.01
LIG1-211ENST00000596457 PYHIN1Q6K0P9 492 aa8.73□□□□□ -1.01
LIG1-211ENST00000596457 DHRS11Q6UWP2 260 aa8.73□□□□□ -1.01
LIG1-211ENST00000596457 ZNF818PQ6ZRF7 136 aa8.73□□□□□ -1.01
LIG1-211ENST00000596457 WIPF2Q8TF74 440 aaPredicted RBP8.73□□□□□ -1.01
LIG1-211ENST00000596457 DDB2Q92466 427 aa8.73□□□□□ -1.01
LIG1-211ENST00000596457 HSD17B10Q99714 261 aaKnown RBP8.73□□□□□ -1.01
LIG1-211ENST00000596457 OR51J1Q9H342 316 aa8.73□□□□□ -1.01
LIG1-211ENST00000596457 TPSG1Q9NRR2 321 aa8.73□□□□□ -1.01
LIG1-211ENST00000596457 MTFP1Q9UDX5 166 aa8.73□□□□□ -1.01
LIG1-211ENST00000596457 DPPA5A6NC42 116 aa8.72□□□□□ -1.01
LIG1-211ENST00000596457 SRRM4A7MD48 611 aaKnown RBP8.72□□□□□ -1.01
LIG1-211ENST00000596457 G3V318 75 aa8.72□□□□□ -1.01
LIG1-211ENST00000596457 GABARAPH6UMI1 98 aa8.72□□□□□ -1.01
LIG1-211ENST00000596457 CNIH1O95406 144 aa8.72□□□□□ -1.01
LIG1-211ENST00000596457 IGLV2-23P01705 113 aa8.72□□□□□ -1.01
LIG1-211ENST00000596457 OPN1MWP04001 364 aa8.72□□□□□ -1.01
LIG1-211ENST00000596457 CD3DP04234 171 aa8.72□□□□□ -1.01
LIG1-211ENST00000596457 OPN1MW2P0DN77 364 aa8.72□□□□□ -1.01
LIG1-211ENST00000596457 OPN1MW3P0DN78 364 aa8.72□□□□□ -1.01
LIG1-211ENST00000596457 S100A5P33763 92 aa8.72□□□□□ -1.01
LIG1-211ENST00000596457 CX3CL1P78423 397 aa8.72□□□□□ -1.01
LIG1-211ENST00000596457 CD83Q01151 205 aa8.72□□□□□ -1.01
LIG1-211ENST00000596457 VMA21Q3ZAQ7 101 aa8.72□□□□□ -1.01
LIG1-211ENST00000596457 RNASE10Q5GAN6 216 aaKnown RBP8.72□□□□□ -1.01
LIG1-211ENST00000596457 TCTEX1D4Q5JR98 221 aa8.72□□□□□ -1.01
LIG1-211ENST00000596457 ZNF66Q6ZN08 573 aa8.72□□□□□ -1.01
LIG1-211ENST00000596457 IDO2Q6ZQW0 420 aa8.72□□□□□ -1.01
LIG1-211ENST00000596457 LCNL1Q6ZST4 164 aa8.72□□□□□ -1.01
LIG1-211ENST00000596457 ZBTB34Q8NCN2 500 aa8.72□□□□□ -1.01
LIG1-211ENST00000596457 OR51H1Q8NH63 302 aa8.72□□□□□ -1.01
LIG1-211ENST00000596457 MOB3AQ96BX8 217 aa8.72□□□□□ -1.01
LIG1-211ENST00000596457 R3HDM4Q96D70 268 aa8.72□□□□□ -1.01
LIG1-211ENST00000596457 FAM103A1Q9BTL3 118 aaKnown RBP8.72□□□□□ -1.01
LIG1-211ENST00000596457 GON7Q9BXV9 100 aa8.72□□□□□ -1.01
LIG1-211ENST00000596457 TINAGL1Q9GZM7 467 aaPredicted RBP8.72□□□□□ -1.01
LIG1-211ENST00000596457 NXF2Q9GZY0 626 aaKnown RBP8.72□□□□□ -1.01
LIG1-211ENST00000596457 FXYD6Q9H0Q3 95 aa8.72□□□□□ -1.01
LIG1-211ENST00000596457 TSSC4Q9Y5U2 329 aaPredicted RBP8.72□□□□□ -1.01
LIG1-211ENST00000596457 TRAV41A0A0B4J266 112 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 NUDT19A8MXV4 375 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 ZNF701M0R085 212 aaPredicted RBP8.71□□□□□ -1.02
LIG1-211ENST00000596457 TPPPO94811 219 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 SPDEFO95238 335 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 RAB3DO95716 219 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 PGAM2P15259 253 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 GNRHRP30968 328 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 TAS2R19P59542 299 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 PJVKQ0ZLH3 352 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 CATR1Q13166 79 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 EIF4EBP1Q13541 118 aaPredicted RBP8.71□□□□□ -1.02
LIG1-211ENST00000596457 FXYD3Q14802 87 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 SCGB2B2Q4G0G5 96 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 PHLDA2Q53GA4 152 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 ACTBL2Q562R1 376 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 PYDC2Q56P42 97 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 AADACL3Q5VUY0 350 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 ZNF660Q6AZW8 331 aaPredicted RBP8.71□□□□□ -1.02
LIG1-211ENST00000596457 TEX38Q6PEX7 206 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 SSX9Q7RTT3 188 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 PPP1R27Q86WC6 154 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 NDUFA11Q86Y39 141 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 VKORC1L1Q8N0U8 176 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 SPAG16Q8N0X2 631 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 TMEM229BQ8NBD8 167 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 OR4S2Q8NH73 311 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 GRPEL2Q8TAA5 225 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 DGCR14Q96DF8 476 aaKnown RBP8.71□□□□□ -1.02
LIG1-211ENST00000596457 MMP27Q9H306 513 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 FBXO7Q9Y3I1 522 aa8.71□□□□□ -1.02
LIG1-211ENST00000596457 A0A1W2PN81 502 aa8.7□□□□□ -1.02
LIG1-211ENST00000596457 GPR31O00270 319 aa8.7□□□□□ -1.02
LIG1-211ENST00000596457 RLN1P04808 185 aa8.7□□□□□ -1.02
LIG1-211ENST00000596457 RPLP1P05386 114 aaKnown RBP8.7□□□□□ -1.02
LIG1-211ENST00000596457 PF4V1P10720 104 aa8.7□□□□□ -1.02
LIG1-211ENST00000596457 CHRNA7P36544 502 aa8.7□□□□□ -1.02
LIG1-211ENST00000596457 KIR2DS2P43631 304 aa8.7□□□□□ -1.02
LIG1-211ENST00000596457 PPP5CP53041 499 aa8.7□□□□□ -1.02
LIG1-211ENST00000596457 MRPS10P82664 201 aaKnown RBP8.7□□□□□ -1.02
LIG1-211ENST00000596457 NDPQ00604 133 aa8.7□□□□□ -1.02
LIG1-211ENST00000596457 TNXAQ16473 311 aa8.7□□□□□ -1.02
LIG1-211ENST00000596457 CXorf66Q5JRM2 361 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms