RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 IGKV1D-39P04432 117 aa8.36□□□□□ -1.07
LIG1-210ENST00000596332 EGR2P11161 476 aaPredicted RBP8.36□□□□□ -1.07
LIG1-210ENST00000596332 CD40LGP29965 261 aa8.36□□□□□ -1.07
LIG1-210ENST00000596332 PROK1P58294 105 aa8.36□□□□□ -1.07
LIG1-210ENST00000596332 RND3P61587 244 aa8.36□□□□□ -1.07
LIG1-210ENST00000596332 DCTN2Q13561 401 aaKnown RBP8.36□□□□□ -1.07
LIG1-210ENST00000596332 HES1Q14469 280 aa8.36□□□□□ -1.07
LIG1-210ENST00000596332 PDPNQ86YL7 162 aa8.36□□□□□ -1.07
LIG1-210ENST00000596332 TOMM5Q8N4H5 51 aa8.36□□□□□ -1.07
LIG1-210ENST00000596332 HSPB9Q9BQS6 159 aa8.36□□□□□ -1.07
LIG1-210ENST00000596332 RANBP3Q9H6Z4 567 aaPredicted RBP8.36□□□□□ -1.07
LIG1-210ENST00000596332 TBC1D24Q9ULP9 559 aa8.36□□□□□ -1.07
LIG1-210ENST00000596332 VSIG4Q9Y279 399 aa8.36□□□□□ -1.07
LIG1-210ENST00000596332 MOB4Q9Y3A3 225 aa8.36□□□□□ -1.07
LIG1-210ENST00000596332 BTBD17A6NE02 478 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 RRHO14718 337 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 NBR2O15453 112 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 PEX14O75381 377 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 IGHG2P01859 326 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 IFNA6P05013 189 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 CTSDP07339 412 aaPredicted RBP8.35□□□□□ -1.07
LIG1-210ENST00000596332 ARHGDIBP52566 201 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 RAG2P55895 527 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 HERV-K104P61576 105 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 NDPQ00604 133 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 TAGLNQ01995 201 aaKnown RBP8.35□□□□□ -1.07
LIG1-210ENST00000596332 PJVKQ0ZLH3 352 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 C5orf64Q2M2E5 130 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 TMEM95Q3KNT9 176 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 SCGB2B2Q4G0G5 96 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 ABCA11PQ4W5N1 156 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 PHLDA2Q53GA4 152 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 OR2B11Q5JQS5 317 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 DHRS7BQ6IAN0 325 aaPredicted RBP8.35□□□□□ -1.07
LIG1-210ENST00000596332 IDO2Q6ZQW0 420 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 KCTD9Q7L273 389 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 ADAD2Q8NCV1 583 aaKnown RBP8.35□□□□□ -1.07
LIG1-210ENST00000596332 OR8H1Q8NGG4 311 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 DEDD2Q8WXF8 326 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 S100ZQ8WXG8 99 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 TMEM158Q8WZ71 300 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 FLYWCH2Q96CP2 140 aaKnown RBP8.35□□□□□ -1.07
LIG1-210ENST00000596332 ADTRPQ96IZ2 230 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 CCDC32Q9BV29 185 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 FBXL15Q9H469 300 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 SLC2A9Q9NRM0 540 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 FBXO7Q9Y3I1 522 aa8.35□□□□□ -1.07
LIG1-210ENST00000596332 IGHV7-81A0A0B4J1V7 117 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 CLPSL1A2RUU4 121 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 RNF212BA8MTL3 300 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 DISC1C4P0D8 188 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 H7C2Y5 167 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 ARPC1BO15143 372 aaKnown RBP8.34□□□□□ -1.07
LIG1-210ENST00000596332 MPPED1O15442 326 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 RBFOX2O43251 390 aaKnown RBP eCLIP8.34□□□□□ -1.07
LIG1-210ENST00000596332 FCGR3BO75015 233 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 CRYZL1O95825 349 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 RLN1P04808 185 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 F2RP25116 425 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 LGALS7P47929 136 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 CCR6P51684 374 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 SUPT4H1P63272 117 aaKnown RBP8.34□□□□□ -1.07
LIG1-210ENST00000596332 DHODHQ02127 395 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 SRSF4Q08170 494 aaKnown RBP8.34□□□□□ -1.07
LIG1-210ENST00000596332 SURF2Q15527 256 aaPredicted RBP8.34□□□□□ -1.07
LIG1-210ENST00000596332 POU2AF1Q16633 256 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 AWAT1Q58HT5 328 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 C19orf54Q5BKX5 351 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 LPCAT3Q6P1A2 487 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 C10orf99Q6UWK7 81 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 TBC1D26Q86UD7 250 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 SLC38A6Q8IZM9 456 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 VKORC1L1Q8N0U8 176 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 PUSL1Q8N0Z8 303 aaKnown RBP8.34□□□□□ -1.07
LIG1-210ENST00000596332 OR4C13Q8NGP0 309 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 TCTEX1D2Q8WW35 142 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 ZNF486Q96H40 463 aaPredicted RBP8.34□□□□□ -1.07
LIG1-210ENST00000596332 TP53RKQ96S44 253 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 NPFFR1Q9GZQ6 430 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 RAB18Q9NP72 206 aa8.34□□□□□ -1.07
LIG1-210ENST00000596332 LIN7CQ9NUP9 197 aaKnown RBP8.34□□□□□ -1.07
LIG1-210ENST00000596332 TRAV3A0A0B4J244 114 aa8.33□□□□□ -1.08
LIG1-210ENST00000596332 A0A1B0GW64 132 aa8.33□□□□□ -1.08
LIG1-210ENST00000596332 NCBP2LA6PVI3 153 aaKnown RBP8.33□□□□□ -1.08
LIG1-210ENST00000596332 E7EUB6 86 aa8.33□□□□□ -1.08
LIG1-210ENST00000596332 M0QZK8 103 aa8.33□□□□□ -1.08
LIG1-210ENST00000596332 UPK1BO75841 260 aa8.33□□□□□ -1.08
LIG1-210ENST00000596332 S1PR2O95136 353 aa8.33□□□□□ -1.08
LIG1-210ENST00000596332 HLA-DRB1P01911 266 aa8.33□□□□□ -1.08
LIG1-210ENST00000596332 APOA2P02652 100 aa8.33□□□□□ -1.08
LIG1-210ENST00000596332 P0C879 139 aa8.33□□□□□ -1.08
LIG1-210ENST00000596332 RRASP10301 218 aa8.33□□□□□ -1.08
LIG1-210ENST00000596332 PIGPP57054 158 aa8.33□□□□□ -1.08
LIG1-210ENST00000596332 RPS16P62249 146 aaKnown RBP8.33□□□□□ -1.08
LIG1-210ENST00000596332 CFHR3Q02985 330 aa8.33□□□□□ -1.08
LIG1-210ENST00000596332 ZNF846Q147U1 533 aa8.33□□□□□ -1.08
LIG1-210ENST00000596332 MMDQ15546 238 aa8.33□□□□□ -1.08
LIG1-210ENST00000596332 TCTEX1D4Q5JR98 221 aa8.33□□□□□ -1.08
LIG1-210ENST00000596332 HIST2H2BDQ6DRA6 164 aa8.33□□□□□ -1.08
LIG1-210ENST00000596332 SPAG16Q8N0X2 631 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms