RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 DSCAML1Q8TD84 2053 aa15.99■□□□□ 0.15
LSM4-203ENST00000593829 GAPDHP04406 335 aaKnown RBP15.99■□□□□ 0.15
LSM4-203ENST00000593829 IGHV1-8P0DP01 117 aa15.99■□□□□ 0.15
LSM4-203ENST00000593829 RAB5BP61020 215 aa15.99■□□□□ 0.15
LSM4-203ENST00000593829 RNF212Q495C1 297 aa15.99■□□□□ 0.15
LSM4-203ENST00000593829 SLC35E4Q6ICL7 350 aa15.99■□□□□ 0.15
LSM4-203ENST00000593829 HCP5Q6MZN7 132 aa15.99■□□□□ 0.15
LSM4-203ENST00000593829 ZNF565Q8N9K5 539 aa15.99■□□□□ 0.15
LSM4-203ENST00000593829 LYPD6BQ8NI32 183 aa15.99■□□□□ 0.15
LSM4-203ENST00000593829 RAB3CQ96E17 227 aa15.99■□□□□ 0.15
LSM4-203ENST00000593829 JMJD8Q96S16 334 aa15.99■□□□□ 0.15
LSM4-203ENST00000593829 RTBDNQ9BSG5 229 aaPredicted RBP15.99■□□□□ 0.15
LSM4-203ENST00000593829 TM2D1Q9BX74 207 aa15.99■□□□□ 0.15
LSM4-203ENST00000593829 PDCD6O75340 191 aa15.98■□□□□ 0.15
LSM4-203ENST00000593829 S100A8P05109 93 aa15.98■□□□□ 0.15
LSM4-203ENST00000593829 GLAP06280 429 aa15.98■□□□□ 0.15
LSM4-203ENST00000593829 HILS1P60008 231 aa15.98■□□□□ 0.15
LSM4-203ENST00000593829 PLAC9Q5JTB6 97 aa15.98■□□□□ 0.15
LSM4-203ENST00000593829 PIP4P2Q8N4L2 257 aa15.98■□□□□ 0.15
LSM4-203ENST00000593829 OR56B1Q8NGI3 324 aa15.98■□□□□ 0.15
LSM4-203ENST00000593829 ZNF48Q96MX3 618 aaPredicted RBP15.98■□□□□ 0.15
LSM4-203ENST00000593829 CMSS1Q9BQ75 279 aaKnown RBP15.98■□□□□ 0.15
LSM4-203ENST00000593829 URM1Q9BTM9 101 aaKnown RBP15.98■□□□□ 0.15
LSM4-203ENST00000593829 A0A1W2PRD5 423 aa15.98■□□□□ 0.15
LSM4-203ENST00000593829 A0A1W2PRF3 423 aa15.98■□□□□ 0.15
LSM4-203ENST00000593829 A0A1W2PRM7 423 aa15.98■□□□□ 0.15
LSM4-203ENST00000593829 TMEM30CPA0ZSE6 113 aa15.98■□□□□ 0.15
LSM4-203ENST00000593829 NPFFO15130 113 aa15.98■□□□□ 0.15
LSM4-203ENST00000593829 SMIM6P0DI80 62 aa15.98■□□□□ 0.15
LSM4-203ENST00000593829 DEFB112Q30KQ8 113 aa15.98■□□□□ 0.15
LSM4-203ENST00000593829 ANKRD55Q3KP44 614 aa15.98■□□□□ 0.15
LSM4-203ENST00000593829 TMEM268Q5VZI3 342 aa15.98■□□□□ 0.15
LSM4-203ENST00000593829 OR5H2Q8NGV7 314 aa15.98■□□□□ 0.15
LSM4-203ENST00000593829 TMEM231Q9H6L2 316 aa15.98■□□□□ 0.15
LSM4-203ENST00000593829 ZNF729A6NN14 1252 aaPredicted RBP15.97■□□□□ 0.15
LSM4-203ENST00000593829 ADAP1O75689 374 aa15.97■□□□□ 0.15
LSM4-203ENST00000593829 SFTA3P0C7M3 94 aa15.97■□□□□ 0.15
LSM4-203ENST00000593829 COX7A1P24310 79 aa15.97■□□□□ 0.15
LSM4-203ENST00000593829 GLP1RP43220 463 aa15.97■□□□□ 0.15
LSM4-203ENST00000593829 HEPN1Q6WQI6 88 aa15.97■□□□□ 0.15
LSM4-203ENST00000593829 OR13A1Q8NGR1 328 aa15.97■□□□□ 0.15
LSM4-203ENST00000593829 OR13D1Q8NGV5 346 aa15.97■□□□□ 0.15
LSM4-203ENST00000593829 NICN1Q9BSH3 213 aa15.97■□□□□ 0.15
LSM4-203ENST00000593829 HRH4Q9H3N8 390 aa15.97■□□□□ 0.15
LSM4-203ENST00000593829 TUBA4BQ9H853 241 aa15.97■□□□□ 0.15
LSM4-203ENST00000593829 CA11O75493 328 aa15.96■□□□□ 0.15
LSM4-203ENST00000593829 ECI1P42126 302 aa15.96■□□□□ 0.15
LSM4-203ENST00000593829 LPAR6P43657 344 aa15.96■□□□□ 0.15
LSM4-203ENST00000593829 F2RL1P55085 397 aa15.96■□□□□ 0.15
LSM4-203ENST00000593829 TMEM50BP56557 158 aa15.96■□□□□ 0.15
LSM4-203ENST00000593829 TAS2R46P59540 309 aa15.96■□□□□ 0.15
LSM4-203ENST00000593829 ZNF497Q6ZNH5 498 aa15.96■□□□□ 0.15
LSM4-203ENST00000593829 PNKDQ8N490 385 aa15.96■□□□□ 0.15
LSM4-203ENST00000593829 FAM89BQ8N5H3 189 aa15.96■□□□□ 0.15
LSM4-203ENST00000593829 COMMD1Q8N668 190 aa15.96■□□□□ 0.15
LSM4-203ENST00000593829 ZDHHC16Q969W1 377 aa15.96■□□□□ 0.15
LSM4-203ENST00000593829 OR10C1Q96KK4 312 aa15.96■□□□□ 0.15
LSM4-203ENST00000593829 TAF9BQ9HBM6 251 aa15.96■□□□□ 0.15
LSM4-203ENST00000593829 FAM96BQ9Y3D0 163 aa15.96■□□□□ 0.15
LSM4-203ENST00000593829 A0A0U1RQK1 487 aa15.96■□□□□ 0.14
LSM4-203ENST00000593829 MDFIC2A0A1B0GVS7 189 aa15.96■□□□□ 0.14
LSM4-203ENST00000593829 VENTXO95231 258 aa15.96■□□□□ 0.14
LSM4-203ENST00000593829 CGB3P0DN86 165 aa15.96■□□□□ 0.14
LSM4-203ENST00000593829 CGB7P0DN87 165 aa15.96■□□□□ 0.14
LSM4-203ENST00000593829 NFYBP25208 207 aa15.96■□□□□ 0.14
LSM4-203ENST00000593829 SAA4P35542 130 aa15.96■□□□□ 0.14
LSM4-203ENST00000593829 RAB32Q13637 225 aa15.96■□□□□ 0.14
LSM4-203ENST00000593829 HABP2Q14520 560 aaPredicted RBP15.96■□□□□ 0.14
LSM4-203ENST00000593829 SLC9A3R2Q15599 337 aa15.96■□□□□ 0.14
LSM4-203ENST00000593829 MIDNQ504T8 468 aa15.96■□□□□ 0.14
LSM4-203ENST00000593829 AADACL3Q5VUY0 350 aa15.96■□□□□ 0.14
LSM4-203ENST00000593829 MRGPRDQ8TDS7 321 aa15.96■□□□□ 0.14
LSM4-203ENST00000593829 PRDM13Q9H4Q3 707 aa15.96■□□□□ 0.14
LSM4-203ENST00000593829 ZMAT5Q9UDW3 170 aaKnown RBP15.96■□□□□ 0.14
LSM4-203ENST00000593829 KBTBD11-OT1A0A1B0GTJ5 212 aa15.95■□□□□ 0.14
LSM4-203ENST00000593829 SOCS1O15524 211 aa15.95■□□□□ 0.14
LSM4-203ENST00000593829 MMP23AO75900 390 aa15.95■□□□□ 0.14
LSM4-203ENST00000593829 HKR1P10072 659 aa15.95■□□□□ 0.14
LSM4-203ENST00000593829 CHATP28329 748 aa15.95■□□□□ 0.14
LSM4-203ENST00000593829 SRSF2Q01130 221 aaKnown RBP15.95■□□□□ 0.14
LSM4-203ENST00000593829 C17orf58Q2M2W7 97 aa15.95■□□□□ 0.14
LSM4-203ENST00000593829 PRAMEF5Q5TYX0 476 aa15.95■□□□□ 0.14
LSM4-203ENST00000593829 TMEM133Q9H2Q1 129 aa15.95■□□□□ 0.14
LSM4-203ENST00000593829 FOXI3A8MTJ6 420 aaPredicted RBP15.94■□□□□ 0.14
LSM4-203ENST00000593829 UBE2CO00762 179 aa15.94■□□□□ 0.14
LSM4-203ENST00000593829 MED6O75586 246 aa15.94■□□□□ 0.14
LSM4-203ENST00000593829 EIF3GO75821 320 aaKnown RBP eCLIP15.94■□□□□ 0.14
LSM4-203ENST00000593829 JTBO76095 146 aa15.94■□□□□ 0.14
LSM4-203ENST00000593829 BLVRBP30043 206 aaPredicted RBP15.94■□□□□ 0.14
LSM4-203ENST00000593829 CALYQ9NYX4 217 aa15.94■□□□□ 0.14
LSM4-203ENST00000593829 CACFD1Q9UGQ2 172 aa15.94■□□□□ 0.14
LSM4-203ENST00000593829 TRAV39A0A0B4J263 110 aa15.94■□□□□ 0.14
LSM4-203ENST00000593829 C5orf52A6NGY3 159 aa15.94■□□□□ 0.14
LSM4-203ENST00000593829 GZMHP20718 246 aa15.94■□□□□ 0.14
LSM4-203ENST00000593829 OMGP23515 440 aa15.94■□□□□ 0.14
LSM4-203ENST00000593829 LGALS4P56470 323 aa15.94■□□□□ 0.14
LSM4-203ENST00000593829 ARL6IP1Q15041 203 aa15.94■□□□□ 0.14
LSM4-203ENST00000593829 RPL7L1Q6DKI1 246 aaKnown RBP15.94■□□□□ 0.14
LSM4-203ENST00000593829 C6orf201Q7Z4U5 140 aa15.94■□□□□ 0.14
LSM4-203ENST00000593829 RTN4RL2Q86UN3 420 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms