RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 SSX1Q16384 188 aa14.45□□□□□ -0.1
CCDC43-205ENST00000592333 IGSF11Q5DX21 431 aa14.45□□□□□ -0.1
CCDC43-205ENST00000592333 CASC10Q5T4H9 136 aa14.45□□□□□ -0.1
CCDC43-205ENST00000592333 ZNF343Q6P1L6 599 aa14.45□□□□□ -0.1
CCDC43-205ENST00000592333 OR5T1Q8NG75 326 aa14.45□□□□□ -0.1
CCDC43-205ENST00000592333 OR9G4Q8NGQ1 327 aa14.45□□□□□ -0.1
CCDC43-205ENST00000592333 OSR1Q8TAX0 266 aaPredicted RBP14.45□□□□□ -0.1
CCDC43-205ENST00000592333 NRG4Q8WWG1 115 aa14.45□□□□□ -0.1
CCDC43-205ENST00000592333 TM2D3Q9BRN9 247 aa14.45□□□□□ -0.1
CCDC43-205ENST00000592333 TRIM64CA6NLI5 447 aa14.44□□□□□ -0.1
CCDC43-205ENST00000592333 CREBL2O60519 120 aaPredicted RBP14.44□□□□□ -0.1
CCDC43-205ENST00000592333 UBE2KP61086 200 aa14.44□□□□□ -0.1
CCDC43-205ENST00000592333 VMA21Q3ZAQ7 101 aa14.44□□□□□ -0.1
CCDC43-205ENST00000592333 FAM209BQ5JX69 171 aa14.44□□□□□ -0.1
CCDC43-205ENST00000592333 HES5Q5TA89 166 aa14.44□□□□□ -0.1
CCDC43-205ENST00000592333 OVCH2Q7RTZ1 564 aa14.44□□□□□ -0.1
CCDC43-205ENST00000592333 SGPP2Q8IWX5 399 aa14.44□□□□□ -0.1
CCDC43-205ENST00000592333 Q8N1Y9 231 aa14.44□□□□□ -0.1
CCDC43-205ENST00000592333 DDB2Q92466 427 aa14.44□□□□□ -0.1
CCDC43-205ENST00000592333 CITED4Q96RK1 184 aa14.44□□□□□ -0.1
CCDC43-205ENST00000592333 GINS4Q9BRT9 223 aa14.44□□□□□ -0.1
CCDC43-205ENST00000592333 C19orf73Q9NVV2 129 aa14.44□□□□□ -0.1
CCDC43-205ENST00000592333 NDUFB11Q9NX14 153 aa14.44□□□□□ -0.1
CCDC43-205ENST00000592333 PEF1Q9UBV8 284 aaKnown RBP14.44□□□□□ -0.1
CCDC43-205ENST00000592333 RBM7Q9Y580 266 aaKnown RBP14.44□□□□□ -0.1
CCDC43-205ENST00000592333 TRDV1A0A1B0GX56 115 aa14.43□□□□□ -0.1
CCDC43-205ENST00000592333 MRPS14O60783 128 aaKnown RBP14.43□□□□□ -0.1
CCDC43-205ENST00000592333 SLC22A5O76082 557 aa14.43□□□□□ -0.1
CCDC43-205ENST00000592333 IGHV4-30-4P0DP06 118 aa14.43□□□□□ -0.1
CCDC43-205ENST00000592333 MYL9P24844 172 aa14.43□□□□□ -0.1
CCDC43-205ENST00000592333 DUTP33316 252 aaKnown RBP14.43□□□□□ -0.1
CCDC43-205ENST00000592333 TALDO1P37837 337 aa14.43□□□□□ -0.1
CCDC43-205ENST00000592333 PJVKQ0ZLH3 352 aa14.43□□□□□ -0.1
CCDC43-205ENST00000592333 BVESQ8NE79 360 aa14.43□□□□□ -0.1
CCDC43-205ENST00000592333 SRRM4A7MD48 611 aaKnown RBP14.42□□□□□ -0.1
CCDC43-205ENST00000592333 CTXN2P0C2S0 81 aa14.42□□□□□ -0.1
CCDC43-205ENST00000592333 GNB3P16520 340 aa14.42□□□□□ -0.1
CCDC43-205ENST00000592333 RAB3BP20337 219 aa14.42□□□□□ -0.1
CCDC43-205ENST00000592333 DTYMKP23919 212 aa14.42□□□□□ -0.1
CCDC43-205ENST00000592333 H1FOOQ8IZA3 346 aaPredicted RBP14.42□□□□□ -0.1
CCDC43-205ENST00000592333 RSRP1Q9BUV0 290 aa14.42□□□□□ -0.1
CCDC43-205ENST00000592333 HUWE1Q7Z6Z7 4374 aaKnown RBP14.41□□□□□ -0.1
CCDC43-205ENST00000592333 FAM223BA6NKX1 122 aa14.41□□□□□ -0.1
CCDC43-205ENST00000592333 AIREO43918 545 aa14.41□□□□□ -0.1
CCDC43-205ENST00000592333 OR2A4O95047 310 aa14.41□□□□□ -0.1
CCDC43-205ENST00000592333 OR9G9P0C7N8 305 aa14.41□□□□□ -0.1
CCDC43-205ENST00000592333 SNRPBP14678 240 aaKnown RBP14.41□□□□□ -0.1
CCDC43-205ENST00000592333 MAP2K4P45985 399 aa14.41□□□□□ -0.1
CCDC43-205ENST00000592333 PLA2G7Q13093 441 aa14.41□□□□□ -0.1
CCDC43-205ENST00000592333 ARFRP1Q13795 201 aa14.41□□□□□ -0.1
CCDC43-205ENST00000592333 PRSS8Q16651 343 aa14.41□□□□□ -0.1
CCDC43-205ENST00000592333 MRGPRG-AS1Q2M3A8 158 aa14.41□□□□□ -0.1
CCDC43-205ENST00000592333 IL34Q6ZMJ4 242 aa14.41□□□□□ -0.1
CCDC43-205ENST00000592333 FAM223AQ8IWN6 122 aa14.41□□□□□ -0.1
CCDC43-205ENST00000592333 ADAD2Q8NCV1 583 aaKnown RBP14.41□□□□□ -0.1
CCDC43-205ENST00000592333 OR2K2Q8NGT1 345 aa14.41□□□□□ -0.1
CCDC43-205ENST00000592333 SNAPC3Q92966 411 aa14.41□□□□□ -0.1
CCDC43-205ENST00000592333 PHB2Q99623 299 aa14.41□□□□□ -0.1
CCDC43-205ENST00000592333 DCSTAMPQ9H295 470 aa14.41□□□□□ -0.1
CCDC43-205ENST00000592333 MSGN1A6NI15 193 aa14.4□□□□□ -0.1
CCDC43-205ENST00000592333 SCGNO76038 276 aa14.4□□□□□ -0.1
CCDC43-205ENST00000592333 LYL1P12980 280 aa14.4□□□□□ -0.1
CCDC43-205ENST00000592333 LCN12Q6JVE5 192 aa14.4□□□□□ -0.1
CCDC43-205ENST00000592333 Q8N402 240 aa14.4□□□□□ -0.1
CCDC43-205ENST00000592333 C5orf30Q96GV9 206 aa14.4□□□□□ -0.1
CCDC43-205ENST00000592333 SPIN2AQ99865 258 aa14.4□□□□□ -0.1
CCDC43-205ENST00000592333 SPIN2BQ9BPZ2 258 aa14.4□□□□□ -0.1
CCDC43-205ENST00000592333 COA4Q9NYJ1 87 aa14.4□□□□□ -0.1
CCDC43-205ENST00000592333 PEMTQ9UBM1 199 aa14.4□□□□□ -0.1
CCDC43-205ENST00000592333 ZNF230Q9UIE0 474 aaPredicted RBP14.4□□□□□ -0.1
CCDC43-205ENST00000592333 SHISA3A0PJX4 238 aa14.39□□□□□ -0.11
CCDC43-205ENST00000592333 ANKRD34BA5PLL1 514 aa14.39□□□□□ -0.11
CCDC43-205ENST00000592333 OR10A3P58181 314 aa14.39□□□□□ -0.11
CCDC43-205ENST00000592333 DYRK1AQ13627 763 aa14.39□□□□□ -0.11
CCDC43-205ENST00000592333 RPEL1Q2QD12 228 aa14.39□□□□□ -0.11
CCDC43-205ENST00000592333 ZNF645Q8N7E2 425 aa14.39□□□□□ -0.11
CCDC43-205ENST00000592333 SRSF12Q8WXF0 261 aaKnown RBP14.39□□□□□ -0.11
CCDC43-205ENST00000592333 PRELID3BQ9Y3B1 194 aa14.39□□□□□ -0.11
CCDC43-205ENST00000592333 TRBV9A0A0B4J1U6 114 aa14.38□□□□□ -0.11
CCDC43-205ENST00000592333 A0A0B4J203 849 aa14.38□□□□□ -0.11
CCDC43-205ENST00000592333 LINC00473A8K010 186 aa14.38□□□□□ -0.11
CCDC43-205ENST00000592333 ANKRD65E5RJM6 399 aa14.38□□□□□ -0.11
CCDC43-205ENST00000592333 ACTL6BO94805 426 aa14.38□□□□□ -0.11
CCDC43-205ENST00000592333 CRYZL1O95825 349 aa14.38□□□□□ -0.11
CCDC43-205ENST00000592333 FGF9P31371 208 aaPredicted RBP14.38□□□□□ -0.11
CCDC43-205ENST00000592333 SYNJ2BPP57105 145 aa14.38□□□□□ -0.11
CCDC43-205ENST00000592333 CDK10Q15131 360 aa14.38□□□□□ -0.11
CCDC43-205ENST00000592333 TNXAQ16473 311 aa14.38□□□□□ -0.11
CCDC43-205ENST00000592333 GTSCR1Q86UQ5 136 aa14.38□□□□□ -0.11
CCDC43-205ENST00000592333 SLC25A42Q86VD7 318 aa14.38□□□□□ -0.11
CCDC43-205ENST00000592333 TPRA1Q86W33 373 aa14.38□□□□□ -0.11
CCDC43-205ENST00000592333 MMD2Q8IY49 270 aa14.38□□□□□ -0.11
CCDC43-205ENST00000592333 SPATA25Q9BR10 227 aa14.38□□□□□ -0.11
CCDC43-205ENST00000592333 OR2W1Q9Y3N9 320 aa14.38□□□□□ -0.11
CCDC43-205ENST00000592333 A0A075B6Q4 140 aa14.37□□□□□ -0.11
CCDC43-205ENST00000592333 HLA-DQB1P01920 261 aa14.37□□□□□ -0.11
CCDC43-205ENST00000592333 CSN3P07498 182 aa14.37□□□□□ -0.11
CCDC43-205ENST00000592333 CD36P16671 472 aa14.37□□□□□ -0.11
CCDC43-205ENST00000592333 MECP2P51608 486 aaKnown RBP14.37□□□□□ -0.11
CCDC43-205ENST00000592333 GABARAPL2P60520 117 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms