RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 TOLLIPQ9H0E2 274 aa8.04□□□□□ -1.12
VPS4B-207ENST00000591519 PARP11Q9NR21 331 aa8.04□□□□□ -1.12
VPS4B-207ENST00000591519 RNF150Q9ULK6 438 aa8.04□□□□□ -1.12
VPS4B-207ENST00000591519 FBXO7Q9Y3I1 522 aa8.04□□□□□ -1.12
VPS4B-207ENST00000591519 ETV7Q9Y603 341 aa8.04□□□□□ -1.12
VPS4B-207ENST00000591519 STAB2Q8WWQ8 2551 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 IGKV1D-8A0A087WSZ0 117 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 IGKV1-6A0A0C4DH72 117 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 OR5H14A6NHG9 310 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 H0YJW9 148 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 J3QRK9 145 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 FCN1O00602 326 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 FABP7O15540 132 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 PROP1O75360 226 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 RBBP9O75884 186 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 TFAP2AP05549 437 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 ALDH3B2P48448 385 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 NDPQ00604 133 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 RPL39P5Q59GN2 51 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 PYHIN1Q6K0P9 492 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 ACSM6Q6P461 480 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 FAM131AQ6UXB0 335 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 ZNF562Q6V9R5 426 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 ANKRD13BQ86YJ7 626 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 CLVS1Q8IUQ0 354 aaPredicted RBP8.03□□□□□ -1.12
VPS4B-207ENST00000591519 CROCCP3Q8IVE0 287 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 SAMD12Q8N8I0 201 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 DLX4Q92988 240 aaPredicted RBP8.03□□□□□ -1.12
VPS4B-207ENST00000591519 OR5B12Q96R08 314 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 ASCL2Q99929 193 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 FBXL15Q9H469 300 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 COMMD3Q9UBI1 195 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 MGAT4AQ9UM21 535 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 SPATA2Q9UM82 520 aa8.03□□□□□ -1.12
VPS4B-207ENST00000591519 FOXA2Q9Y261 457 aaPredicted RBP8.03□□□□□ -1.12
VPS4B-207ENST00000591519 A0A1W2PN81 502 aa8.02□□□□□ -1.13
VPS4B-207ENST00000591519 MEIS3P1A6NDR6 274 aa8.02□□□□□ -1.13
VPS4B-207ENST00000591519 LINC01619G3V211 115 aa8.02□□□□□ -1.13
VPS4B-207ENST00000591519 ARPC1BO15143 372 aaKnown RBP8.02□□□□□ -1.13
VPS4B-207ENST00000591519 SSX5O60225 188 aa8.02□□□□□ -1.13
VPS4B-207ENST00000591519 GABARAPO95166 117 aa8.02□□□□□ -1.13
VPS4B-207ENST00000591519 HSPB1P04792 205 aaKnown RBP8.02□□□□□ -1.13
VPS4B-207ENST00000591519 LGALS1P09382 135 aaKnown RBP8.02□□□□□ -1.13
VPS4B-207ENST00000591519 ZBTB25P24278 435 aa8.02□□□□□ -1.13
VPS4B-207ENST00000591519 CHRNA7P36544 502 aa8.02□□□□□ -1.13
VPS4B-207ENST00000591519 CTF1Q16619 201 aa8.02□□□□□ -1.13
VPS4B-207ENST00000591519 UBE2NLQ5JXB2 153 aa8.02□□□□□ -1.13
VPS4B-207ENST00000591519 HACD4Q5VWC8 232 aa8.02□□□□□ -1.13
VPS4B-207ENST00000591519 SBSPONQ8IVN8 264 aa8.02□□□□□ -1.13
VPS4B-207ENST00000591519 OR4A4PQ8NGN8 299 aa8.02□□□□□ -1.13
VPS4B-207ENST00000591519 SLC25A46Q96AG3 418 aa8.02□□□□□ -1.13
VPS4B-207ENST00000591519 RHOVQ96L33 236 aa8.02□□□□□ -1.13
VPS4B-207ENST00000591519 C11orf54Q9H0W9 315 aaPredicted RBP8.02□□□□□ -1.13
VPS4B-207ENST00000591519 DCSTAMPQ9H295 470 aa8.02□□□□□ -1.13
VPS4B-207ENST00000591519 DIABLOQ9NR28 239 aa8.02□□□□□ -1.13
VPS4B-207ENST00000591519 WASHC3Q9Y3C0 194 aa8.02□□□□□ -1.13
VPS4B-207ENST00000591519 SCGNO76038 276 aa8.01□□□□□ -1.13
VPS4B-207ENST00000591519 EIF4EP06730 217 aaKnown RBP8.01□□□□□ -1.13
VPS4B-207ENST00000591519 GSTP1P09211 210 aaKnown RBP8.01□□□□□ -1.13
VPS4B-207ENST00000591519 SPNP16150 400 aa8.01□□□□□ -1.13
VPS4B-207ENST00000591519 SPCS2Q15005 226 aa8.01□□□□□ -1.13
VPS4B-207ENST00000591519 ARL6IP1Q15041 203 aa8.01□□□□□ -1.13
VPS4B-207ENST00000591519 GLDNQ6ZMI3 551 aaPredicted RBP8.01□□□□□ -1.13
VPS4B-207ENST00000591519 PPP1R27Q86WC6 154 aa8.01□□□□□ -1.13
VPS4B-207ENST00000591519 OR10J5Q8NHC4 309 aa8.01□□□□□ -1.13
VPS4B-207ENST00000591519 FLYWCH2Q96CP2 140 aaKnown RBP8.01□□□□□ -1.13
VPS4B-207ENST00000591519 GINS4Q9BRT9 223 aa8.01□□□□□ -1.13
VPS4B-207ENST00000591519 ALX4Q9H161 411 aaPredicted RBP8.01□□□□□ -1.13
VPS4B-207ENST00000591519 SLA2Q9H6Q3 261 aa8.01□□□□□ -1.13
VPS4B-207ENST00000591519 RDH8Q9NYR8 311 aa8.01□□□□□ -1.13
VPS4B-207ENST00000591519 RBM7Q9Y580 266 aaKnown RBP8.01□□□□□ -1.13
VPS4B-207ENST00000591519 IGHV4OR15-8A0A075B7B6 117 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 A0A087WW49 117 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 FAM25AB3EWG3 89 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 FAM25CB3EWG5 89 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 FAM25GB3EWG6 89 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 HPGDSO60760 199 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 SAP30O75446 220 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 SPDEFO95238 335 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 BRI3O95415 125 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 LY86O95711 162 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 OR8U9P0C7N5 309 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 GP9P14770 177 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 DTYMKP23919 212 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 RORCP51449 518 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 SLURP1P55000 103 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 SCAND1P57086 179 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 PSG5Q15238 335 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 ECSCRQ19T08 205 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 ACTBL2Q562R1 376 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 TMEM69Q5SWH9 247 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 UNQ5815/PRO19632Q6UWF5 114 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 GVQW1Q8N7I0 195 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 DRAXINQ8NBI3 349 aaPredicted RBP8□□□□□ -1.13
VPS4B-207ENST00000591519 OR6Q1Q8NGQ2 317 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 S100A16Q96FQ6 103 aaKnown RBP8□□□□□ -1.13
VPS4B-207ENST00000591519 AUNIPQ9H7T9 357 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 ZNF221Q9UK13 617 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 GAB2Q9UQC2 676 aa8□□□□□ -1.13
VPS4B-207ENST00000591519 MRPS7Q9Y2R9 242 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms