RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 PJVKQ0ZLH3 352 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 AKIRIN2Q53H80 203 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 TMEM177Q53S58 311 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 ACTBL2Q562R1 376 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 UBE2NLQ5JXB2 153 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 TMEM69Q5SWH9 247 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 REC114Q7Z4M0 266 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 ZNF645Q8N7E2 425 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 TCTEX1D1Q8N7M0 179 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 OR11H1Q8NG94 326 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 OR1N2Q8NGR9 330 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 OR13F1Q8NGS4 319 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 CASTOR1Q8WTX7 329 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 ARPC1AQ92747 370 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 DPF1Q92782 380 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 UBE2E2Q96LR5 201 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 MS4A10Q96PG2 267 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 MCRIP2Q9BUT9 160 aaKnown RBP9.42□□□□□ -0.9
TPM4-212ENST00000590180 GPR61Q9BZJ8 451 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 TPSG1Q9NRR2 321 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 ZNF355PQ9NSJ1 428 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 COMMD3Q9UBI1 195 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 RBMX2Q9Y388 322 aaKnown RBP9.42□□□□□ -0.9
TPM4-212ENST00000590180 PRELID3BQ9Y3B1 194 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 TGP01266 2768 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 IGKV1D-13A0A0B4J2D9 117 aa9.41□□□□□ -0.9
TPM4-212ENST00000590180 SMIM31A0A1B0GVY4 71 aa9.41□□□□□ -0.9
TPM4-212ENST00000590180 IGLV2-23P01705 113 aa9.41□□□□□ -0.9
TPM4-212ENST00000590180 IGKV1-13P0DP09 117 aa9.41□□□□□ -0.9
TPM4-212ENST00000590180 HOXD3P31249 432 aaPredicted RBP9.41□□□□□ -0.9
TPM4-212ENST00000590180 CRIP2P52943 208 aaPredicted RBP9.41□□□□□ -0.9
TPM4-212ENST00000590180 KIAA0141Q14154 515 aaPredicted RBP9.41□□□□□ -0.9
TPM4-212ENST00000590180 VMA21Q3ZAQ7 101 aa9.41□□□□□ -0.9
TPM4-212ENST00000590180 OR2B11Q5JQS5 317 aa9.41□□□□□ -0.9
TPM4-212ENST00000590180 OR5T1Q8NG75 326 aa9.41□□□□□ -0.9
TPM4-212ENST00000590180 MRAPQ8TCY5 172 aa9.41□□□□□ -0.9
TPM4-212ENST00000590180 C4orf3Q8WVX3 66 aa9.41□□□□□ -0.9
TPM4-212ENST00000590180 DDB2Q92466 427 aa9.41□□□□□ -0.9
TPM4-212ENST00000590180 SLC25A46Q96AG3 418 aa9.41□□□□□ -0.9
TPM4-212ENST00000590180 GNB4Q9HAV0 340 aa9.41□□□□□ -0.9
TPM4-212ENST00000590180 IFT46Q9NQC8 304 aa9.41□□□□□ -0.9
TPM4-212ENST00000590180 AURKAIP1Q9NWT8 199 aaPredicted RBP9.41□□□□□ -0.9
TPM4-212ENST00000590180 MRPS7Q9Y2R9 242 aaKnown RBP9.41□□□□□ -0.9
TPM4-212ENST00000590180 ARPC1BO15143 372 aaKnown RBP9.4□□□□□ -0.9
TPM4-212ENST00000590180 SOX15O60248 233 aa9.4□□□□□ -0.9
TPM4-212ENST00000590180 CRYGBP07316 175 aa9.4□□□□□ -0.9
TPM4-212ENST00000590180 AADACP22760 399 aa9.4□□□□□ -0.9
TPM4-212ENST00000590180 PRSS3P35030 304 aa9.4□□□□□ -0.9
TPM4-212ENST00000590180 RORCP51449 518 aa9.4□□□□□ -0.9
TPM4-212ENST00000590180 TAS2R20P59543 309 aa9.4□□□□□ -0.9
TPM4-212ENST00000590180 RPL30P62888 115 aaKnown RBP9.4□□□□□ -0.9
TPM4-212ENST00000590180 MFSD4AQ8N468 514 aa9.4□□□□□ -0.9
TPM4-212ENST00000590180 TEX45Q8NA69 505 aa9.4□□□□□ -0.9
TPM4-212ENST00000590180 OR5M8Q8NGP6 311 aa9.4□□□□□ -0.9
TPM4-212ENST00000590180 OSR1Q8TAX0 266 aaPredicted RBP9.4□□□□□ -0.9
TPM4-212ENST00000590180 SECTM1Q8WVN6 248 aa9.4□□□□□ -0.9
TPM4-212ENST00000590180 TCTEX1D2Q8WW35 142 aa9.4□□□□□ -0.9
TPM4-212ENST00000590180 KCTD12Q96CX2 325 aaKnown RBP9.4□□□□□ -0.9
TPM4-212ENST00000590180 CCL28Q9NRJ3 127 aa9.4□□□□□ -0.9
TPM4-212ENST00000590180 TNCP24821 2201 aa9.39□□□□□ -0.91
TPM4-212ENST00000590180 IGHV3-11P01762 117 aa9.39□□□□□ -0.91
TPM4-212ENST00000590180 TRGV3P03979 118 aa9.39□□□□□ -0.91
TPM4-212ENST00000590180 SMIM18P0DKX4 95 aa9.39□□□□□ -0.91
TPM4-212ENST00000590180 TPPP2P59282 170 aa9.39□□□□□ -0.91
TPM4-212ENST00000590180 FXYD4P59646 89 aa9.39□□□□□ -0.91
TPM4-212ENST00000590180 KRTAP10-11P60412 298 aa9.39□□□□□ -0.91
TPM4-212ENST00000590180 UBE2KP61086 200 aa9.39□□□□□ -0.91
TPM4-212ENST00000590180 CDK10Q15131 360 aa9.39□□□□□ -0.91
TPM4-212ENST00000590180 C19orf54Q5BKX5 351 aa9.39□□□□□ -0.91
TPM4-212ENST00000590180 DEFB121Q5J5C9 76 aa9.39□□□□□ -0.91
TPM4-212ENST00000590180 GPR107Q5VW38 600 aa9.39□□□□□ -0.91
TPM4-212ENST00000590180 PYHIN1Q6K0P9 492 aa9.39□□□□□ -0.91
TPM4-212ENST00000590180 IDO2Q6ZQW0 420 aa9.39□□□□□ -0.91
TPM4-212ENST00000590180 KCTD9Q7L273 389 aa9.39□□□□□ -0.91
TPM4-212ENST00000590180 ANKRD13BQ86YJ7 626 aa9.39□□□□□ -0.91
TPM4-212ENST00000590180 OR5AP2Q8NGF4 316 aa9.39□□□□□ -0.91
TPM4-212ENST00000590180 MYOZ3Q8TDC0 251 aa9.39□□□□□ -0.91
TPM4-212ENST00000590180 PHB2Q99623 299 aa9.39□□□□□ -0.91
TPM4-212ENST00000590180 HSD17B10Q99714 261 aaKnown RBP9.39□□□□□ -0.91
TPM4-212ENST00000590180 SLC5A7Q9GZV3 580 aa9.39□□□□□ -0.91
TPM4-212ENST00000590180 NAA50Q9GZZ1 169 aaKnown RBP9.39□□□□□ -0.91
TPM4-212ENST00000590180 TAS2R8Q9NYW2 309 aa9.39□□□□□ -0.91
TPM4-212ENST00000590180 MSGN1A6NI15 193 aa9.38□□□□□ -0.91
TPM4-212ENST00000590180 I3L521 148 aa9.38□□□□□ -0.91
TPM4-212ENST00000590180 TNFSF12O43508 249 aa9.38□□□□□ -0.91
TPM4-212ENST00000590180 ACTL6BO94805 426 aa9.38□□□□□ -0.91
TPM4-212ENST00000590180 PPYP01298 95 aa9.38□□□□□ -0.91
TPM4-212ENST00000590180 IGLV2-14P01704 120 aa9.38□□□□□ -0.91
TPM4-212ENST00000590180 PMP2P02689 132 aa9.38□□□□□ -0.91
TPM4-212ENST00000590180 EIF4EP06730 217 aaKnown RBP9.38□□□□□ -0.91
TPM4-212ENST00000590180 RUNX1Q01196 453 aa9.38□□□□□ -0.91
TPM4-212ENST00000590180 ZNF616Q08AN1 781 aa9.38□□□□□ -0.91
TPM4-212ENST00000590180 TNXAQ16473 311 aa9.38□□□□□ -0.91
TPM4-212ENST00000590180 PRSS8Q16651 343 aa9.38□□□□□ -0.91
TPM4-212ENST00000590180 MZT2AQ6P582 158 aa9.38□□□□□ -0.91
TPM4-212ENST00000590180 GPR141Q7Z602 305 aa9.38□□□□□ -0.91
TPM4-212ENST00000590180 GIMAP1Q8WWP7 306 aa9.38□□□□□ -0.91
TPM4-212ENST00000590180 ACOT12Q8WYK0 555 aa9.38□□□□□ -0.91
TPM4-212ENST00000590180 SNAPC3Q92966 411 aa9.38□□□□□ -0.91
TPM4-212ENST00000590180 CMTM3Q96MX0 182 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms