RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 LINC00473A8K010 186 aa16.1■□□□□ 0.17
MBD3-205ENST00000589064 SHOXO15266 292 aa16.1■□□□□ 0.17
MBD3-205ENST00000589064 HLA-DQB1P01920 261 aa16.1■□□□□ 0.17
MBD3-205ENST00000589064 RRASP10301 218 aa16.1■□□□□ 0.17
MBD3-205ENST00000589064 GNB1P62873 340 aa16.1■□□□□ 0.17
MBD3-205ENST00000589064 RUNX1Q01196 453 aa16.1■□□□□ 0.17
MBD3-205ENST00000589064 GRPEL2Q8TAA5 225 aa16.1■□□□□ 0.17
MBD3-205ENST00000589064 DDB2Q92466 427 aa16.1■□□□□ 0.17
MBD3-205ENST00000589064 ARPC1AQ92747 370 aa16.1■□□□□ 0.17
MBD3-205ENST00000589064 ADTRPQ96IZ2 230 aa16.1■□□□□ 0.17
MBD3-205ENST00000589064 MS4A10Q96PG2 267 aa16.1■□□□□ 0.17
MBD3-205ENST00000589064 DIABLOQ9NR28 239 aa16.1■□□□□ 0.17
MBD3-205ENST00000589064 CNIH1O95406 144 aa16.1■□□□□ 0.17
MBD3-205ENST00000589064 FHL3Q13643 280 aa16.1■□□□□ 0.17
MBD3-205ENST00000589064 DEFB121Q5J5C9 76 aa16.1■□□□□ 0.17
MBD3-205ENST00000589064 GVQW1Q8N7I0 195 aa16.1■□□□□ 0.17
MBD3-205ENST00000589064 ALX4Q9H161 411 aaPredicted RBP16.1■□□□□ 0.17
MBD3-205ENST00000589064 AUNIPQ9H7T9 357 aa16.1■□□□□ 0.17
MBD3-205ENST00000589064 A0A0A6YYH2 397 aa16.09■□□□□ 0.17
MBD3-205ENST00000589064 IGKV1D-13A0A0B4J2D9 117 aa16.09■□□□□ 0.17
MBD3-205ENST00000589064 A6NJ64 397 aa16.09■□□□□ 0.17
MBD3-205ENST00000589064 IGKV1-13P0DP09 117 aa16.09■□□□□ 0.17
MBD3-205ENST00000589064 PTHLHP12272 177 aa16.09■□□□□ 0.17
MBD3-205ENST00000589064 SSBP2P81877 361 aaPredicted RBP16.09■□□□□ 0.17
MBD3-205ENST00000589064 ZNF645Q8N7E2 425 aa16.09■□□□□ 0.17
MBD3-205ENST00000589064 BEST4Q8NFU0 473 aa16.09■□□□□ 0.17
MBD3-205ENST00000589064 TMEM127O75204 238 aa16.08■□□□□ 0.16
MBD3-205ENST00000589064 TUSC2O75896 110 aa16.08■□□□□ 0.16
MBD3-205ENST00000589064 CRYZL1O95825 349 aa16.08■□□□□ 0.16
MBD3-205ENST00000589064 FCER2P06734 321 aa16.08■□□□□ 0.16
MBD3-205ENST00000589064 ZNF616Q08AN1 781 aa16.08■□□□□ 0.16
MBD3-205ENST00000589064 ASPHD1Q5U4P2 390 aa16.08■□□□□ 0.16
MBD3-205ENST00000589064 CROCCP3Q8IVE0 287 aa16.08■□□□□ 0.16
MBD3-205ENST00000589064 OR5T1Q8NG75 326 aa16.08■□□□□ 0.16
MBD3-205ENST00000589064 RBMX2Q9Y388 322 aaKnown RBP16.08■□□□□ 0.16
MBD3-205ENST00000589064 IGLV2-14P01704 120 aa16.07■□□□□ 0.16
MBD3-205ENST00000589064 CD40LGP29965 261 aa16.07■□□□□ 0.16
MBD3-205ENST00000589064 PYHIN1Q6K0P9 492 aa16.07■□□□□ 0.16
MBD3-205ENST00000589064 HOGA1Q86XE5 327 aa16.07■□□□□ 0.16
MBD3-205ENST00000589064 SEC14L6B5MCN3 397 aa16.06■□□□□ 0.16
MBD3-205ENST00000589064 SLC22A5O76082 557 aa16.06■□□□□ 0.16
MBD3-205ENST00000589064 IGHV3-11P01762 117 aa16.06■□□□□ 0.16
MBD3-205ENST00000589064 OR8U8P0C7N1 319 aa16.06■□□□□ 0.16
MBD3-205ENST00000589064 ARPC4P59998 168 aa16.06■□□□□ 0.16
MBD3-205ENST00000589064 RPL30P62888 115 aaKnown RBP16.06■□□□□ 0.16
MBD3-205ENST00000589064 MRGPRG-AS1Q2M3A8 158 aa16.06■□□□□ 0.16
MBD3-205ENST00000589064 C9orf66Q5T8R8 295 aa16.06■□□□□ 0.16
MBD3-205ENST00000589064 TEX45Q8NA69 505 aa16.06■□□□□ 0.16
MBD3-205ENST00000589064 S100A16Q96FQ6 103 aaKnown RBP16.06■□□□□ 0.16
MBD3-205ENST00000589064 ZNF355PQ9NSJ1 428 aa16.06■□□□□ 0.16
MBD3-205ENST00000589064 TRIM64CA6NLI5 447 aa16.05■□□□□ 0.16
MBD3-205ENST00000589064 FCGR3BO75015 233 aa16.05■□□□□ 0.16
MBD3-205ENST00000589064 TPPP2P59282 170 aa16.05■□□□□ 0.16
MBD3-205ENST00000589064 DGCR2P98153 550 aa16.05■□□□□ 0.16
MBD3-205ENST00000589064 VMA21Q3ZAQ7 101 aa16.05■□□□□ 0.16
MBD3-205ENST00000589064 IDO2Q6ZQW0 420 aa16.05■□□□□ 0.16
MBD3-205ENST00000589064 DCUN1D5Q9BTE7 237 aa16.05■□□□□ 0.16
MBD3-205ENST00000589064 SCOCQ9UIL1 159 aa16.05■□□□□ 0.16
MBD3-205ENST00000589064 PRELID3BQ9Y3B1 194 aa16.05■□□□□ 0.16
MBD3-205ENST00000589064 XRCC3O43542 346 aa16.04■□□□□ 0.16
MBD3-205ENST00000589064 TRGV3P03979 118 aa16.04■□□□□ 0.16
MBD3-205ENST00000589064 LGALS1P09382 135 aaKnown RBP16.04■□□□□ 0.16
MBD3-205ENST00000589064 SMIM18P0DKX4 95 aa16.04■□□□□ 0.16
MBD3-205ENST00000589064 FCGR2CP31995 323 aa16.04■□□□□ 0.16
MBD3-205ENST00000589064 UBE2KP61086 200 aa16.04■□□□□ 0.16
MBD3-205ENST00000589064 OR2B11Q5JQS5 317 aa16.04■□□□□ 0.16
MBD3-205ENST00000589064 KCTD9Q7L273 389 aa16.04■□□□□ 0.16
MBD3-205ENST00000589064 OSR1Q8TAX0 266 aaPredicted RBP16.04■□□□□ 0.16
MBD3-205ENST00000589064 DCUN1D4Q92564 292 aa16.04■□□□□ 0.16
MBD3-205ENST00000589064 RHOVQ96L33 236 aa16.04■□□□□ 0.16
MBD3-205ENST00000589064 FUNDC2Q9BWH2 189 aa16.04■□□□□ 0.16
MBD3-205ENST00000589064 ZMAT5Q9UDW3 170 aaKnown RBP16.04■□□□□ 0.16
MBD3-205ENST00000589064 MEIS3P1A6NDR6 274 aa16.03■□□□□ 0.16
MBD3-205ENST00000589064 AADACP22760 399 aa16.03■□□□□ 0.16
MBD3-205ENST00000589064 PRSS8Q16651 343 aa16.03■□□□□ 0.16
MBD3-205ENST00000589064 UBE2NLQ5JXB2 153 aa16.03■□□□□ 0.16
MBD3-205ENST00000589064 SAMD12Q8N8I0 201 aa16.03■□□□□ 0.16
MBD3-205ENST00000589064 POC5Q8NA72 575 aa16.03■□□□□ 0.16
MBD3-205ENST00000589064 SLA2Q9H6Q3 261 aa16.03■□□□□ 0.16
MBD3-205ENST00000589064 MSGN1A6NI15 193 aa16.03■□□□□ 0.16
MBD3-205ENST00000589064 LINC01619G3V211 115 aa16.03■□□□□ 0.16
MBD3-205ENST00000589064 CBX5P45973 191 aa16.03■□□□□ 0.16
MBD3-205ENST00000589064 SLURP1P55000 103 aa16.03■□□□□ 0.16
MBD3-205ENST00000589064 NCS1P62166 190 aa16.03■□□□□ 0.16
MBD3-205ENST00000589064 TNXAQ16473 311 aa16.03■□□□□ 0.16
MBD3-205ENST00000589064 MFSD4AQ8N468 514 aa16.03■□□□□ 0.16
MBD3-205ENST00000589064 TCTEX1D2Q8WW35 142 aa16.03■□□□□ 0.16
MBD3-205ENST00000589064 DLX4Q92988 240 aaPredicted RBP16.03■□□□□ 0.16
MBD3-205ENST00000589064 GPHA2Q96T91 129 aa16.03■□□□□ 0.16
MBD3-205ENST00000589064 CCL28Q9NRJ3 127 aa16.03■□□□□ 0.16
MBD3-205ENST00000589064 IGHV4OR15-8A0A075B7B6 117 aa16.02■□□□□ 0.15
MBD3-205ENST00000589064 A0A087WW49 117 aa16.02■□□□□ 0.15
MBD3-205ENST00000589064 APELAP0DMC3 54 aa16.02■□□□□ 0.15
MBD3-205ENST00000589064 VBP1P61758 197 aa16.02■□□□□ 0.15
MBD3-205ENST00000589064 EIF4EBP1Q13541 118 aaPredicted RBP16.02■□□□□ 0.15
MBD3-205ENST00000589064 SECTM1Q8WVN6 248 aa16.02■□□□□ 0.15
MBD3-205ENST00000589064 SNAPC3Q92966 411 aa16.02■□□□□ 0.15
MBD3-205ENST00000589064 SLC25A46Q96AG3 418 aa16.02■□□□□ 0.15
MBD3-205ENST00000589064 TMEM68Q96MH6 324 aa16.02■□□□□ 0.15
MBD3-205ENST00000589064 HSD17B10Q99714 261 aaKnown RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms