RNA–Protein interactions for RNA: ENST00000588680.1

NFIX-211, Transcript of nuclear factor I X, humanhuman

TSL 5

Gene NFIX, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-211ENST00000588680 RBPMS2Q6ZRY4 209 aaKnown RBP5.69□□□□□ -1.5
NFIX-211ENST00000588680 C19orf35Q6ZS72 473 aa5.69□□□□□ -1.5
NFIX-211ENST00000588680 GPHB5Q86YW7 130 aa5.69□□□□□ -1.5
NFIX-211ENST00000588680 OR2C3Q8N628 320 aa5.69□□□□□ -1.5
NFIX-211ENST00000588680 ACOT12Q8WYK0 555 aa5.69□□□□□ -1.5
NFIX-211ENST00000588680 NEDD4LQ96PU5 975 aa5.69□□□□□ -1.5
NFIX-211ENST00000588680 FAAP24Q9BTP7 215 aa5.69□□□□□ -1.5
NFIX-211ENST00000588680 FBXL7Q9UJT9 491 aa5.69□□□□□ -1.5
NFIX-211ENST00000588680 OAZ3Q9UMX2 235 aa5.69□□□□□ -1.5
NFIX-211ENST00000588680 EXOSC1Q9Y3B2 195 aaKnown RBP5.69□□□□□ -1.5
NFIX-211ENST00000588680 S4R3C0 116 aa5.69□□□□□ -1.5
NFIX-211ENST00000588680 LRP1BQ9NZR2 4599 aa5.69□□□□□ -1.5
NFIX-211ENST00000588680 TRAV25A0A0B4J276 109 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 TRBV5-5A0A0J9YX44 114 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 SAC3D1A6NKF1 404 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 SRRM4A7MD48 611 aaKnown RBP5.68□□□□□ -1.5
NFIX-211ENST00000588680 DYNC1I1O14576 645 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 DEFB4AO15263 64 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 SHOXO15266 292 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 LIMS3P0CW19 117 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 LIMS4P0CW20 117 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 ZBTB25P24278 435 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 MFAP2P55001 183 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 GNGT1P63211 74 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 VMA21Q3ZAQ7 101 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 FAM106AQ4KMX7 169 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 CCDC58Q4VC31 144 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 TMEM177Q53S58 311 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 RPL22L1Q6P5R6 122 aaKnown RBP5.68□□□□□ -1.5
NFIX-211ENST00000588680 CLEC19AQ6UXS0 136 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 UNQ9165/PRO28630Q6UXU0 137 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 CEACAM19Q7Z692 300 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 SLC38A6Q8IZM9 456 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 OR52I1Q8NGK6 324 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 PTX4Q96A99 478 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 SMIM19Q96E16 107 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 C5orf30Q96GV9 206 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 SPAG8Q99932 426 aaPredicted RBP5.68□□□□□ -1.5
NFIX-211ENST00000588680 NICN1Q9BSH3 213 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 HDHD3Q9BSH5 251 aaPredicted RBP5.68□□□□□ -1.5
NFIX-211ENST00000588680 MAP6D1Q9H9H5 199 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 AMBNQ9NP70 447 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 NACAE9PAV3 2078 aa5.68□□□□□ -1.5
NFIX-211ENST00000588680 APOBP04114 4563 aaKnown RBP5.68□□□□□ -1.5
NFIX-211ENST00000588680 TRBV5-7A0A0A0MS05 114 aa5.67□□□□□ -1.5
NFIX-211ENST00000588680 A0A1W2PPK0 400 aa5.67□□□□□ -1.5
NFIX-211ENST00000588680 SCTP09683 121 aa5.67□□□□□ -1.5
NFIX-211ENST00000588680 GABRB1P18505 474 aa5.67□□□□□ -1.5
NFIX-211ENST00000588680 UBE2KP61086 200 aa5.67□□□□□ -1.5
NFIX-211ENST00000588680 RPS11P62280 158 aaKnown RBP eCLIP5.67□□□□□ -1.5
NFIX-211ENST00000588680 TAGLNQ01995 201 aaKnown RBP5.67□□□□□ -1.5
NFIX-211ENST00000588680 CBX3Q13185 183 aa5.67□□□□□ -1.5
NFIX-211ENST00000588680 RTL8BQ17RB0 113 aa5.67□□□□□ -1.5
NFIX-211ENST00000588680 Q499Y3 187 aa5.67□□□□□ -1.5
NFIX-211ENST00000588680 DNAL1Q4LDG9 190 aa5.67□□□□□ -1.5
NFIX-211ENST00000588680 ZNF585BQ52M93 769 aa5.67□□□□□ -1.5
NFIX-211ENST00000588680 OR2G6Q5TZ20 316 aa5.67□□□□□ -1.5
NFIX-211ENST00000588680 OR4A47Q6IF82 309 aa5.67□□□□□ -1.5
NFIX-211ENST00000588680 OR10K2Q6IF99 312 aa5.67□□□□□ -1.5
NFIX-211ENST00000588680 TTC9CQ8N5M4 171 aa5.67□□□□□ -1.5
NFIX-211ENST00000588680 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.67□□□□□ -1.5
NFIX-211ENST00000588680 OR11H2Q8NH07 326 aa5.67□□□□□ -1.5
NFIX-211ENST00000588680 OR5B3Q8NH48 314 aa5.67□□□□□ -1.5
NFIX-211ENST00000588680 MARC2Q969Z3 335 aa5.67□□□□□ -1.5
NFIX-211ENST00000588680 GALNT14Q96FL9 552 aa5.67□□□□□ -1.5
NFIX-211ENST00000588680 SPIN2AQ99865 258 aa5.67□□□□□ -1.5
NFIX-211ENST00000588680 RARRES2Q99969 163 aa5.67□□□□□ -1.5
NFIX-211ENST00000588680 SPIN2BQ9BPZ2 258 aa5.67□□□□□ -1.5
NFIX-211ENST00000588680 OR2D2Q9H210 308 aa5.67□□□□□ -1.5
NFIX-211ENST00000588680 KCNK15Q9H427 330 aa5.67□□□□□ -1.5
NFIX-211ENST00000588680 ZNF430Q9H8G1 570 aaPredicted RBP5.67□□□□□ -1.5
NFIX-211ENST00000588680 RDH8Q9NYR8 311 aa5.67□□□□□ -1.5
NFIX-211ENST00000588680 IGHV4-4A0A075B6R2 117 aa5.66□□□□□ -1.5
NFIX-211ENST00000588680 TRBV6-6A0A0A6YYG2 114 aa5.66□□□□□ -1.5
NFIX-211ENST00000588680 IGKV1-6A0A0C4DH72 117 aa5.66□□□□□ -1.5
NFIX-211ENST00000588680 HMX3A6NHT5 357 aa5.66□□□□□ -1.5
NFIX-211ENST00000588680 MPTX1A8MV57 137 aa5.66□□□□□ -1.5
NFIX-211ENST00000588680 M0R2N4 97 aa5.66□□□□□ -1.5
NFIX-211ENST00000588680 GYG2O15488 501 aa5.66□□□□□ -1.5
NFIX-211ENST00000588680 ACTL6BO94805 426 aa5.66□□□□□ -1.5
NFIX-211ENST00000588680 CRYZL1O95825 349 aa5.66□□□□□ -1.5
NFIX-211ENST00000588680 LALBAP00709 142 aa5.66□□□□□ -1.5
NFIX-211ENST00000588680 ALPLP05186 524 aa5.66□□□□□ -1.5
NFIX-211ENST00000588680 SAA1P0DJI8 122 aaPredicted RBP5.66□□□□□ -1.5
NFIX-211ENST00000588680 C8orf88P0DMB2 117 aa5.66□□□□□ -1.5
NFIX-211ENST00000588680 FCGR1AP12314 374 aa5.66□□□□□ -1.5
NFIX-211ENST00000588680 HTR2CP28335 458 aa5.66□□□□□ -1.5
NFIX-211ENST00000588680 ETV1P50549 477 aa5.66□□□□□ -1.5
NFIX-211ENST00000588680 GYS2P54840 703 aa5.66□□□□□ -1.5
NFIX-211ENST00000588680 RPS27AP62979 156 aaKnown RBP5.66□□□□□ -1.5
NFIX-211ENST00000588680 ZIK1Q3SY52 487 aaPredicted RBP5.66□□□□□ -1.5
NFIX-211ENST00000588680 GLT8D1Q68CQ7 371 aa5.66□□□□□ -1.5
NFIX-211ENST00000588680 SLC25A42Q86VD7 318 aa5.66□□□□□ -1.5
NFIX-211ENST00000588680 NKAIN3Q8N8D7 197 aa5.66□□□□□ -1.5
NFIX-211ENST00000588680 ZFP41Q8N8Y5 198 aa5.66□□□□□ -1.5
NFIX-211ENST00000588680 TEX45Q8NA69 505 aa5.66□□□□□ -1.5
NFIX-211ENST00000588680 CD300LFQ8TDQ1 290 aa5.66□□□□□ -1.5
NFIX-211ENST00000588680 GGHQ92820 318 aa5.66□□□□□ -1.5
NFIX-211ENST00000588680 EEF1AKMT3Q96AZ1 226 aa5.66□□□□□ -1.5
NFIX-211ENST00000588680 TMEM59Q9BXS4 323 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms