RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 KIR2DS2P43631 304 aa9.13□□□□□ -0.95
VMP1-207ENST00000588131 KLF17Q5JT82 389 aaPredicted RBP9.13□□□□□ -0.95
VMP1-207ENST00000588131 MINOS1Q5TGZ0 78 aa9.13□□□□□ -0.95
VMP1-207ENST00000588131 GGNBP1Q5YKI7 109 aa9.13□□□□□ -0.95
VMP1-207ENST00000588131 TCTEX1D1Q8N7M0 179 aa9.13□□□□□ -0.95
VMP1-207ENST00000588131 OR5AN1Q8NGI8 311 aa9.13□□□□□ -0.95
VMP1-207ENST00000588131 IL22RA2Q969J5 263 aa9.13□□□□□ -0.95
VMP1-207ENST00000588131 OR10C1Q96KK4 312 aa9.13□□□□□ -0.95
VMP1-207ENST00000588131 FYTTD1Q96QD9 318 aaKnown RBP9.13□□□□□ -0.95
VMP1-207ENST00000588131 ZNF436Q9C0F3 470 aaPredicted RBP9.13□□□□□ -0.95
VMP1-207ENST00000588131 RANGRFQ9HD47 186 aaPredicted RBP9.13□□□□□ -0.95
VMP1-207ENST00000588131 FAM212BQ9NTI7 297 aaPredicted RBP9.13□□□□□ -0.95
VMP1-207ENST00000588131 PRELID3BQ9Y3B1 194 aa9.13□□□□□ -0.95
VMP1-207ENST00000588131 TBL2Q9Y4P3 447 aaKnown RBP9.13□□□□□ -0.95
VMP1-207ENST00000588131 HILPDAQ9Y5L2 63 aa9.13□□□□□ -0.95
VMP1-207ENST00000588131 MINOS1-NBL1R4GNA1 71 aa9.13□□□□□ -0.95
VMP1-207ENST00000588131 MED13LQ71F56 2210 aa9.13□□□□□ -0.95
VMP1-207ENST00000588131 C13orf42A0A1B0GVH6 325 aa9.12□□□□□ -0.95
VMP1-207ENST00000588131 FAM25EA8MYX2 175 aa9.12□□□□□ -0.95
VMP1-207ENST00000588131 J3QLI3 93 aa9.12□□□□□ -0.95
VMP1-207ENST00000588131 RBFOX2O43251 390 aaKnown RBP eCLIP9.12□□□□□ -0.95
VMP1-207ENST00000588131 TXNL1O43396 289 aa9.12□□□□□ -0.95
VMP1-207ENST00000588131 CRYZL1O95825 349 aa9.12□□□□□ -0.95
VMP1-207ENST00000588131 SAA4P35542 130 aa9.12□□□□□ -0.95
VMP1-207ENST00000588131 CEACAM3P40198 252 aa9.12□□□□□ -0.95
VMP1-207ENST00000588131 LGALS4P56470 323 aa9.12□□□□□ -0.95
VMP1-207ENST00000588131 SSX2Q16385 188 aa9.12□□□□□ -0.95
VMP1-207ENST00000588131 IZUMO4Q1ZYL8 232 aa9.12□□□□□ -0.95
VMP1-207ENST00000588131 NMSQ5H8A3 153 aa9.12□□□□□ -0.95
VMP1-207ENST00000588131 BRD3OSQ6XYD6 125 aa9.12□□□□□ -0.95
VMP1-207ENST00000588131 MOB3BQ86TA1 216 aa9.12□□□□□ -0.95
VMP1-207ENST00000588131 OR4S2Q8NH73 311 aa9.12□□□□□ -0.95
VMP1-207ENST00000588131 CD300LFQ8TDQ1 290 aa9.12□□□□□ -0.95
VMP1-207ENST00000588131 SEC22AQ96IW7 307 aa9.12□□□□□ -0.95
VMP1-207ENST00000588131 SOX21Q9Y651 276 aaPredicted RBP9.12□□□□□ -0.95
VMP1-207ENST00000588131 DUXBA0A1W2PPF3 345 aa9.11□□□□□ -0.95
VMP1-207ENST00000588131 C5orf51A6NDU8 294 aa9.11□□□□□ -0.95
VMP1-207ENST00000588131 SMLR1H3BR10 107 aa9.11□□□□□ -0.95
VMP1-207ENST00000588131 H7C2Y5 167 aa9.11□□□□□ -0.95
VMP1-207ENST00000588131 TIMM23O14925 209 aa9.11□□□□□ -0.95
VMP1-207ENST00000588131 OR2A4O95047 310 aa9.11□□□□□ -0.95
VMP1-207ENST00000588131 HPRT1P00492 218 aa9.11□□□□□ -0.95
VMP1-207ENST00000588131 KRASP01116 189 aa9.11□□□□□ -0.95
VMP1-207ENST00000588131 APOA2P02652 100 aa9.11□□□□□ -0.95
VMP1-207ENST00000588131 IGKV1-16P04430 117 aa9.11□□□□□ -0.95
VMP1-207ENST00000588131 EPHA1P21709 976 aa9.11□□□□□ -0.95
VMP1-207ENST00000588131 G6PCP35575 357 aa9.11□□□□□ -0.95
VMP1-207ENST00000588131 KRTAP1-1Q07627 177 aa9.11□□□□□ -0.95
VMP1-207ENST00000588131 RTL8BQ17RB0 113 aa9.11□□□□□ -0.95
VMP1-207ENST00000588131 MIDNQ504T8 468 aa9.11□□□□□ -0.95
VMP1-207ENST00000588131 GPR157Q5UAW9 335 aa9.11□□□□□ -0.95
VMP1-207ENST00000588131 GSG1LQ6UXU4 331 aa9.11□□□□□ -0.95
VMP1-207ENST00000588131 CFHR4Q92496 578 aa9.11□□□□□ -0.95
VMP1-207ENST00000588131 GPR146Q96CH1 333 aa9.11□□□□□ -0.95
VMP1-207ENST00000588131 R3HDM4Q96D70 268 aa9.11□□□□□ -0.95
VMP1-207ENST00000588131 OR2A7Q96R45 310 aa9.11□□□□□ -0.95
VMP1-207ENST00000588131 PLEKHA2Q9HB19 425 aa9.11□□□□□ -0.95
VMP1-207ENST00000588131 COMMD9Q9P000 198 aa9.11□□□□□ -0.95
VMP1-207ENST00000588131 WASHC3Q9Y3C0 194 aa9.11□□□□□ -0.95
VMP1-207ENST00000588131 TMED3Q9Y3Q3 217 aa9.11□□□□□ -0.95
VMP1-207ENST00000588131 OOSP1A8MZH6 123 aa9.1□□□□□ -0.95
VMP1-207ENST00000588131 FSHBP01225 129 aa9.1□□□□□ -0.95
VMP1-207ENST00000588131 IFNA21P01568 189 aa9.1□□□□□ -0.95
VMP1-207ENST00000588131 GIPP09681 153 aaPredicted RBP9.1□□□□□ -0.95
VMP1-207ENST00000588131 P0C879 139 aa9.1□□□□□ -0.95
VMP1-207ENST00000588131 RRASP10301 218 aa9.1□□□□□ -0.95
VMP1-207ENST00000588131 VDAC1P21796 283 aa9.1□□□□□ -0.95
VMP1-207ENST00000588131 AKR1C2P52895 323 aa9.1□□□□□ -0.95
VMP1-207ENST00000588131 TAGLNQ01995 201 aaKnown RBP9.1□□□□□ -0.95
VMP1-207ENST00000588131 SRSF4Q08170 494 aaKnown RBP9.1□□□□□ -0.95
VMP1-207ENST00000588131 HABP2Q14520 560 aaPredicted RBP9.1□□□□□ -0.95
VMP1-207ENST00000588131 FBLN7Q53RD9 439 aa9.1□□□□□ -0.95
VMP1-207ENST00000588131 TMEM177Q53S58 311 aa9.1□□□□□ -0.95
VMP1-207ENST00000588131 DHRS7BQ6IAN0 325 aaPredicted RBP9.1□□□□□ -0.95
VMP1-207ENST00000588131 Q6ZRM9 215 aa9.1□□□□□ -0.95
VMP1-207ENST00000588131 PDPNQ86YL7 162 aa9.1□□□□□ -0.95
VMP1-207ENST00000588131 FAM219AQ8IW50 185 aa9.1□□□□□ -0.95
VMP1-207ENST00000588131 VKORC1L1Q8N0U8 176 aa9.1□□□□□ -0.95
VMP1-207ENST00000588131 OR8H3Q8N146 312 aa9.1□□□□□ -0.95
VMP1-207ENST00000588131 RNASE11Q8TAA1 199 aaKnown RBP9.1□□□□□ -0.95
VMP1-207ENST00000588131 LSM10Q969L4 123 aaKnown RBP9.1□□□□□ -0.95
VMP1-207ENST00000588131 MALSU1Q96EH3 234 aa9.1□□□□□ -0.95
VMP1-207ENST00000588131 RITA1Q96K30 269 aa9.1□□□□□ -0.95
VMP1-207ENST00000588131 PDCD10Q9BUL8 212 aa9.1□□□□□ -0.95
VMP1-207ENST00000588131 AKAP9Q99996 3911 aa9.1□□□□□ -0.95
VMP1-207ENST00000588131 A0A0U1RQK1 487 aa9.09□□□□□ -0.95
VMP1-207ENST00000588131 MARCH11A6NNE9 402 aa9.09□□□□□ -0.95
VMP1-207ENST00000588131 SRRM4A7MD48 611 aaKnown RBP9.09□□□□□ -0.95
VMP1-207ENST00000588131 G3V3Q6 166 aa9.09□□□□□ -0.95
VMP1-207ENST00000588131 CD24P25063 80 aa9.09□□□□□ -0.95
VMP1-207ENST00000588131 MC5RP33032 325 aa9.09□□□□□ -0.95
VMP1-207ENST00000588131 RAB13P51153 203 aa9.09□□□□□ -0.95
VMP1-207ENST00000588131 IL15RAQ13261 267 aa9.09□□□□□ -0.95
VMP1-207ENST00000588131 IAH1Q2TAA2 248 aaPredicted RBP9.09□□□□□ -0.95
VMP1-207ENST00000588131 Q5BKY6 102 aa9.09□□□□□ -0.95
VMP1-207ENST00000588131 SSX9Q7RTT3 188 aa9.09□□□□□ -0.95
VMP1-207ENST00000588131 TCTE3Q8IZS6 198 aa9.09□□□□□ -0.95
VMP1-207ENST00000588131 ZBTB8BQ8NAP8 495 aaPredicted RBP9.09□□□□□ -0.95
VMP1-207ENST00000588131 C2orf50Q96LR7 162 aa9.09□□□□□ -0.95
VMP1-207ENST00000588131 RANBP3Q9H6Z4 567 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms