RNA–Protein interactions for RNA: ENST00000586457.1

CLIP3-203, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 1 (best)

Gene CLIP3, Length 433 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-203ENST00000586457 GVQW1Q8N7I0 195 aa8.54□□□□□ -1.04
CLIP3-203ENST00000586457 POC5Q8NA72 575 aa8.54□□□□□ -1.04
CLIP3-203ENST00000586457 OR5AP2Q8NGF4 316 aa8.54□□□□□ -1.04
CLIP3-203ENST00000586457 OR5H2Q8NGV7 314 aa8.54□□□□□ -1.04
CLIP3-203ENST00000586457 OSR1Q8TAX0 266 aaPredicted RBP8.54□□□□□ -1.04
CLIP3-203ENST00000586457 ARPC1AQ92747 370 aa8.54□□□□□ -1.04
CLIP3-203ENST00000586457 HSD17B10Q99714 261 aaKnown RBP8.54□□□□□ -1.04
CLIP3-203ENST00000586457 SLC5A7Q9GZV3 580 aa8.54□□□□□ -1.04
CLIP3-203ENST00000586457 ZNF580Q9UK33 172 aa8.54□□□□□ -1.04
CLIP3-203ENST00000586457 VSIG4Q9Y279 399 aa8.54□□□□□ -1.04
CLIP3-203ENST00000586457 VWFP04275 2813 aa8.54□□□□□ -1.04
CLIP3-203ENST00000586457 PROP1O75360 226 aa8.53□□□□□ -1.04
CLIP3-203ENST00000586457 ZNF182P17025 639 aaPredicted RBP8.53□□□□□ -1.04
CLIP3-203ENST00000586457 S100GP29377 79 aa8.53□□□□□ -1.04
CLIP3-203ENST00000586457 DUTP33316 252 aaKnown RBP8.53□□□□□ -1.04
CLIP3-203ENST00000586457 RAB9AP51151 201 aa8.53□□□□□ -1.04
CLIP3-203ENST00000586457 TAS2R46P59540 309 aa8.53□□□□□ -1.04
CLIP3-203ENST00000586457 TSPAN5P62079 268 aa8.53□□□□□ -1.04
CLIP3-203ENST00000586457 CATR1Q13166 79 aa8.53□□□□□ -1.04
CLIP3-203ENST00000586457 PDLIM3Q53GG5 364 aaPredicted RBP8.53□□□□□ -1.04
CLIP3-203ENST00000586457 AKIRIN2Q53H80 203 aa8.53□□□□□ -1.04
CLIP3-203ENST00000586457 TMEM177Q53S58 311 aa8.53□□□□□ -1.04
CLIP3-203ENST00000586457 OR2B11Q5JQS5 317 aa8.53□□□□□ -1.04
CLIP3-203ENST00000586457 ZBTB34Q8NCN2 500 aa8.53□□□□□ -1.04
CLIP3-203ENST00000586457 LFNGQ8NES3 379 aa8.53□□□□□ -1.04
CLIP3-203ENST00000586457 WFDC9Q8NEX5 89 aa8.53□□□□□ -1.04
CLIP3-203ENST00000586457 OR5M8Q8NGP6 311 aa8.53□□□□□ -1.04
CLIP3-203ENST00000586457 OR4S2Q8NH73 311 aa8.53□□□□□ -1.04
CLIP3-203ENST00000586457 C15orf40Q8WUR7 153 aa8.53□□□□□ -1.04
CLIP3-203ENST00000586457 C4orf3Q8WVX3 66 aa8.53□□□□□ -1.04
CLIP3-203ENST00000586457 UBE2E2Q96LR5 201 aa8.53□□□□□ -1.04
CLIP3-203ENST00000586457 TAS2R8Q9NYW2 309 aa8.53□□□□□ -1.04
CLIP3-203ENST00000586457 EHFQ9NZC4 300 aa8.53□□□□□ -1.04
CLIP3-203ENST00000586457 RBMX2Q9Y388 322 aaKnown RBP8.53□□□□□ -1.04
CLIP3-203ENST00000586457 RGS5O15539 181 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 HPGDSO60760 199 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 HRASP01112 189 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 PPYP01298 95 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 PMP2P02689 132 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 PTHLHP12272 177 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 AADACP22760 399 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 PSMB8P28062 276 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 KIR2DS2P43631 304 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 TPPP2P59282 170 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 TNXAQ16473 311 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 SAMD5Q5TGI4 173 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 ZNF66Q6ZN08 573 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 SNX29P2Q8IUI4 249 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 CLVS1Q8IUQ0 354 aaPredicted RBP8.52□□□□□ -1.05
CLIP3-203ENST00000586457 MRPL41Q8IXM3 137 aaKnown RBP8.52□□□□□ -1.05
CLIP3-203ENST00000586457 CMTM1Q8IZ96 169 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 TEX45Q8NA69 505 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 OR1N2Q8NGR9 330 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 OR6F1Q8NGZ6 308 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 VSTM2AQ8TAG5 236 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 GIMAP1Q8WWP7 306 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 TMEM68Q96MH6 324 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 MS4A10Q96PG2 267 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 DUX3Q96PT4 197 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 OR5B12Q96R08 314 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 FAM103A1Q9BTL3 118 aaKnown RBP8.52□□□□□ -1.05
CLIP3-203ENST00000586457 SLA2Q9H6Q3 261 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 ADAM30Q9UKF2 790 aa8.52□□□□□ -1.05
CLIP3-203ENST00000586457 MEGF8Q7Z7M0 2845 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 C13orf42A0A1B0GVH6 325 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 DPPA5A6NC42 116 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 LINC00473A8K010 186 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 TNFSF12O43508 249 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 IGLV1-40P01703 118 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 TRGV3P03979 118 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 IFNA6P05013 189 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 EIF4EP06730 217 aaKnown RBP8.51□□□□□ -1.05
CLIP3-203ENST00000586457 PPIFP30405 207 aaKnown RBP8.51□□□□□ -1.05
CLIP3-203ENST00000586457 UBE2KP61086 200 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 CFHR3Q02985 330 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 DEFB136Q30KP8 78 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 C18orf65Q6ZTR6 163 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 TMEM17Q86X19 198 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 MMD2Q8IY49 270 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 MFSD4AQ8N468 514 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 LINC00482Q8N8I6 264 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 RNF152Q8N8N0 203 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 MINDY2Q8NBR6 621 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 OR5T1Q8NG75 326 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 OR11H1Q8NG94 326 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 RAX2Q96IS3 184 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 KLK15Q9H2R5 256 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 SCPEP1Q9HB40 452 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 CCL28Q9NRJ3 127 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 COA4Q9NYJ1 87 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 NUBP2Q9Y5Y2 271 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 WNK1Q9H4A3 2382 aa8.51□□□□□ -1.05
CLIP3-203ENST00000586457 IGKV1D-13A0A0B4J2D9 117 aa8.5□□□□□ -1.05
CLIP3-203ENST00000586457 A0A0G2JLM5 398 aa8.5□□□□□ -1.05
CLIP3-203ENST00000586457 MSGN1A6NI15 193 aa8.5□□□□□ -1.05
CLIP3-203ENST00000586457 GABARAPO95166 117 aa8.5□□□□□ -1.05
CLIP3-203ENST00000586457 OR8U8P0C7N1 319 aa8.5□□□□□ -1.05
CLIP3-203ENST00000586457 SMIM18P0DKX4 95 aa8.5□□□□□ -1.05
CLIP3-203ENST00000586457 IGKV1-13P0DP09 117 aa8.5□□□□□ -1.05
CLIP3-203ENST00000586457 ELK1P19419 428 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms