RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 A6NDX4 124 aa12.78□□□□□ -0.36
CSNK1D-223ENST00000584472 FAM90A9PA6NNJ1 464 aa12.78□□□□□ -0.36
CSNK1D-223ENST00000584472 H0YJW9 148 aa12.78□□□□□ -0.36
CSNK1D-223ENST00000584472 RLN1P04808 185 aa12.78□□□□□ -0.36
CSNK1D-223ENST00000584472 CD1BP29016 333 aa12.78□□□□□ -0.36
CSNK1D-223ENST00000584472 RAB13P51153 203 aa12.78□□□□□ -0.36
CSNK1D-223ENST00000584472 PIGPP57054 158 aa12.78□□□□□ -0.36
CSNK1D-223ENST00000584472 ABCA11PQ4W5N1 156 aa12.78□□□□□ -0.36
CSNK1D-223ENST00000584472 KCTD9Q7L273 389 aa12.78□□□□□ -0.36
CSNK1D-223ENST00000584472 DDB2Q92466 427 aa12.78□□□□□ -0.36
CSNK1D-223ENST00000584472 RANBP3Q9H6Z4 567 aaPredicted RBP12.78□□□□□ -0.36
CSNK1D-223ENST00000584472 BEX1Q9HBH7 125 aa12.78□□□□□ -0.36
CSNK1D-223ENST00000584472 CHST1O43916 411 aa12.77□□□□□ -0.37
CSNK1D-223ENST00000584472 TSPAN9O75954 239 aa12.77□□□□□ -0.37
CSNK1D-223ENST00000584472 TCRBP04435 133 aa12.77□□□□□ -0.37
CSNK1D-223ENST00000584472 CD24P25063 80 aa12.77□□□□□ -0.37
CSNK1D-223ENST00000584472 S100GP29377 79 aa12.77□□□□□ -0.37
CSNK1D-223ENST00000584472 MC5RP33032 325 aa12.77□□□□□ -0.37
CSNK1D-223ENST00000584472 CATR1Q13166 79 aa12.77□□□□□ -0.37
CSNK1D-223ENST00000584472 NRARPQ7Z6K4 114 aa12.77□□□□□ -0.37
CSNK1D-223ENST00000584472 TBC1D26Q86UD7 250 aa12.77□□□□□ -0.37
CSNK1D-223ENST00000584472 CCDC71LQ8N9Z2 235 aa12.77□□□□□ -0.37
CSNK1D-223ENST00000584472 ADAD2Q8NCV1 583 aaKnown RBP12.77□□□□□ -0.37
CSNK1D-223ENST00000584472 ENKURQ8TC29 256 aa12.77□□□□□ -0.37
CSNK1D-223ENST00000584472 CAPSLQ8WWF8 208 aa12.77□□□□□ -0.37
CSNK1D-223ENST00000584472 NPFFR1Q9GZQ6 430 aa12.77□□□□□ -0.37
CSNK1D-223ENST00000584472 C16orf95Q9H693 158 aa12.77□□□□□ -0.37
CSNK1D-223ENST00000584472 COPZ2Q9P299 210 aa12.77□□□□□ -0.37
CSNK1D-223ENST00000584472 MPPED1O15442 326 aa12.76□□□□□ -0.37
CSNK1D-223ENST00000584472 IGKV1D-33P01593 117 aa12.76□□□□□ -0.37
CSNK1D-223ENST00000584472 IGKV1-33P01594 117 aa12.76□□□□□ -0.37
CSNK1D-223ENST00000584472 APOA2P02652 100 aa12.76□□□□□ -0.37
CSNK1D-223ENST00000584472 SNRNP70P08621 437 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-223ENST00000584472 MDKP21741 143 aaPredicted RBP12.76□□□□□ -0.37
CSNK1D-223ENST00000584472 TAGLNQ01995 201 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-223ENST00000584472 EBI3Q14213 229 aa12.76□□□□□ -0.37
CSNK1D-223ENST00000584472 FBLN7Q53RD9 439 aa12.76□□□□□ -0.37
CSNK1D-223ENST00000584472 Q6ZSV7 163 aa12.76□□□□□ -0.37
CSNK1D-223ENST00000584472 C16orf82Q7Z2V1 217 aa12.76□□□□□ -0.37
CSNK1D-223ENST00000584472 TMED4Q7Z7H5 227 aa12.76□□□□□ -0.37
CSNK1D-223ENST00000584472 THNSL2Q86YJ6 484 aa12.76□□□□□ -0.37
CSNK1D-223ENST00000584472 DUSP18Q8NEJ0 188 aa12.76□□□□□ -0.37
CSNK1D-223ENST00000584472 OR4C13Q8NGP0 309 aa12.76□□□□□ -0.37
CSNK1D-223ENST00000584472 OR51H1Q8NH63 302 aa12.76□□□□□ -0.37
CSNK1D-223ENST00000584472 TCTEX1D2Q8WW35 142 aa12.76□□□□□ -0.37
CSNK1D-223ENST00000584472 TAF15Q92804 592 aaKnown RBP eCLIP12.76□□□□□ -0.376e-6■■□□□ 12.5
CSNK1D-223ENST00000584472 TMEM230Q96A57 120 aa12.76□□□□□ -0.37
CSNK1D-223ENST00000584472 RBMXL1Q96E39 390 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-223ENST00000584472 C20orf85Q9H1P6 137 aa12.76□□□□□ -0.37
CSNK1D-223ENST00000584472 SLC35D1Q9NTN3 355 aa12.76□□□□□ -0.37
CSNK1D-223ENST00000584472 FLVCR2Q9UPI3 526 aa12.76□□□□□ -0.37
CSNK1D-223ENST00000584472 PRELID3BQ9Y3B1 194 aa12.76□□□□□ -0.37
CSNK1D-223ENST00000584472 WASHC3Q9Y3C0 194 aa12.76□□□□□ -0.37
CSNK1D-223ENST00000584472 CLPSL1A2RUU4 121 aa12.75□□□□□ -0.37
CSNK1D-223ENST00000584472 H7C2Y5 167 aa12.75□□□□□ -0.37
CSNK1D-223ENST00000584472 FAM106CPP0CH98 169 aa12.75□□□□□ -0.37
CSNK1D-223ENST00000584472 F2RP25116 425 aa12.75□□□□□ -0.37
CSNK1D-223ENST00000584472 BRWD1-AS2P59051 145 aa12.75□□□□□ -0.37
CSNK1D-223ENST00000584472 CCBE1Q6UXH8 406 aaPredicted RBP12.75□□□□□ -0.37
CSNK1D-223ENST00000584472 TMEM219Q86XT9 240 aa12.75□□□□□ -0.37
CSNK1D-223ENST00000584472 PDPNQ86YL7 162 aa12.75□□□□□ -0.37
CSNK1D-223ENST00000584472 CENPSQ8N2Z9 138 aa12.75□□□□□ -0.37
CSNK1D-223ENST00000584472 LINC01006Q8NI28 216 aa12.75□□□□□ -0.37
CSNK1D-223ENST00000584472 NUBP2Q9Y5Y2 271 aa12.75□□□□□ -0.37
CSNK1D-223ENST00000584472 VWFP04275 2813 aa12.75□□□□□ -0.37
CSNK1D-223ENST00000584472 MEGF8Q7Z7M0 2845 aa12.74□□□□□ -0.37
CSNK1D-223ENST00000584472 CRYM-AS1A6NIL9 109 aa12.74□□□□□ -0.37
CSNK1D-223ENST00000584472 ARPC1BO15143 372 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-223ENST00000584472 FCGR3BO75015 233 aa12.74□□□□□ -0.37
CSNK1D-223ENST00000584472 PTTG1O95997 202 aa12.74□□□□□ -0.37
CSNK1D-223ENST00000584472 IGKV1-16P04430 117 aa12.74□□□□□ -0.37
CSNK1D-223ENST00000584472 RRASP10301 218 aa12.74□□□□□ -0.37
CSNK1D-223ENST00000584472 DHODHQ02127 395 aa12.74□□□□□ -0.37
CSNK1D-223ENST00000584472 RTL8BQ17RB0 113 aa12.74□□□□□ -0.37
CSNK1D-223ENST00000584472 OR2B11Q5JQS5 317 aa12.74□□□□□ -0.37
CSNK1D-223ENST00000584472 SLC25A42Q86VD7 318 aa12.74□□□□□ -0.37
CSNK1D-223ENST00000584472 SPAG16Q8N0X2 631 aa12.74□□□□□ -0.37
CSNK1D-223ENST00000584472 TCTEX1D1Q8N7M0 179 aa12.74□□□□□ -0.37
CSNK1D-223ENST00000584472 OR2T10Q8NGZ9 312 aa12.74□□□□□ -0.37
CSNK1D-223ENST00000584472 EAF1Q96JC9 268 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-223ENST00000584472 NAA60Q9H7X0 242 aa12.74□□□□□ -0.37
CSNK1D-223ENST00000584472 LIN7CQ9NUP9 197 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-223ENST00000584472 NUDT15Q9NV35 164 aa12.74□□□□□ -0.37
CSNK1D-223ENST00000584472 TRAV6A0A075B6T7 132 aa12.73□□□□□ -0.37
CSNK1D-223ENST00000584472 TEX13DA0A0J9YY54 714 aaPredicted RBP12.73□□□□□ -0.37
CSNK1D-223ENST00000584472 C3orf85A0A1B0GTC6 90 aa12.73□□□□□ -0.37
CSNK1D-223ENST00000584472 RBFOX2O43251 390 aaKnown RBP eCLIP12.73□□□□□ -0.371e-7■■■■□ 21.6
CSNK1D-223ENST00000584472 RAMP3O60896 148 aa12.73□□□□□ -0.37
CSNK1D-223ENST00000584472 OR2F2O95006 317 aa12.73□□□□□ -0.37
CSNK1D-223ENST00000584472 MOSP00540 346 aa12.73□□□□□ -0.37
CSNK1D-223ENST00000584472 H2AFB2P0C5Z0 115 aa12.73□□□□□ -0.37
CSNK1D-223ENST00000584472 AKR1C4P17516 323 aa12.73□□□□□ -0.37
CSNK1D-223ENST00000584472 KIR2DS2P43631 304 aa12.73□□□□□ -0.37
CSNK1D-223ENST00000584472 HES1Q14469 280 aa12.73□□□□□ -0.37
CSNK1D-223ENST00000584472 TMEM128Q5BJH2 165 aa12.73□□□□□ -0.37
CSNK1D-223ENST00000584472 C11orf88Q6PI97 169 aa12.73□□□□□ -0.37
CSNK1D-223ENST00000584472 SGPP2Q8IWX5 399 aa12.73□□□□□ -0.37
CSNK1D-223ENST00000584472 Q8N6K4 173 aa12.73□□□□□ -0.37
CSNK1D-223ENST00000584472 WFDC12Q8WWY7 111 aa12.73□□□□□ -0.37
CSNK1D-223ENST00000584472 RITA1Q96K30 269 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms