RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 SNAPC5O75971 98 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 IGKV1-39P01597 117 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 IGHV2-5P01817 119 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 IGKV1D-39P04432 117 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 DVL1P1P54792 670 aaPredicted RBP10.24□□□□□ -0.77
SRSF1-204ENST00000581979 IL15RAQ13261 267 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 SMCO1Q147U7 214 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 ZNF546Q86UE3 836 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 FOXRED2Q8IWF2 684 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 C11orf42Q8N5U0 333 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 OR9G1Q8NH87 305 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 CLDND2Q8NHS1 167 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 TMEM133Q9H2Q1 129 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 FAM212BQ9NTI7 297 aaPredicted RBP10.24□□□□□ -0.77
SRSF1-204ENST00000581979 ZNRD1Q9P1U0 126 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 MBD2Q9UBB5 411 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 PRELID3BQ9Y3B1 194 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 LSM5Q9Y4Y9 91 aaKnown RBP10.24□□□□□ -0.77
SRSF1-204ENST00000581979 A0A087X0M5 115 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 A0A1B0GX30 115 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 J3QR06 171 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 TOR1AO14656 332 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 FCGR3BO75015 233 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 TSC22D2O75157 780 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 ATG12O94817 140 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 RBP4P02753 201 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 EPHA1P21709 976 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 THBS3P49746 956 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 LINC00205P59089 165 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 NMSQ5H8A3 153 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 NCR3LG1Q68D85 454 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 PRSS54Q6PEW0 395 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 C1orf229Q6ZS94 237 aaPredicted RBP10.24□□□□□ -0.77
SRSF1-204ENST00000581979 FAM219AQ8IW50 185 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 ABHD12Q8N2K0 398 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 LINC00311Q8N616 119 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 C8orf31Q8N9H6 132 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 OR10X1Q8NGY0 326 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 CD300LFQ8TDQ1 290 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 DCUN1D4Q92564 292 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 GPR146Q96CH1 333 aa10.24□□□□□ -0.77
SRSF1-204ENST00000581979 RRNAD1Q96FB5 475 aaKnown RBP10.24□□□□□ -0.77
SRSF1-204ENST00000581979 S1PR2O95136 353 aa10.23□□□□□ -0.77
SRSF1-204ENST00000581979 RLN2P04090 185 aa10.23□□□□□ -0.77
SRSF1-204ENST00000581979 CXCL2P19875 107 aa10.23□□□□□ -0.77
SRSF1-204ENST00000581979 C4BPBP20851 252 aa10.23□□□□□ -0.77
SRSF1-204ENST00000581979 KIR2DS2P43631 304 aa10.23□□□□□ -0.77
SRSF1-204ENST00000581979 TMEM65Q6PI78 240 aa10.23□□□□□ -0.77
SRSF1-204ENST00000581979 OR4D5Q8NGN0 318 aa10.23□□□□□ -0.77
SRSF1-204ENST00000581979 LSM10Q969L4 123 aaKnown RBP10.23□□□□□ -0.77
SRSF1-204ENST00000581979 ADTRPQ96IZ2 230 aa10.23□□□□□ -0.77
SRSF1-204ENST00000581979 ZNF251Q9BRH9 671 aa10.23□□□□□ -0.77
SRSF1-204ENST00000581979 MFFQ9GZY8 342 aa10.23□□□□□ -0.77
SRSF1-204ENST00000581979 ZFP57Q9NU63 452 aa10.23□□□□□ -0.77
SRSF1-204ENST00000581979 H0YIZ8 118 aa10.22□□□□□ -0.77
SRSF1-204ENST00000581979 IGKV1-5P01602 117 aa10.22□□□□□ -0.77
SRSF1-204ENST00000581979 MBPP02686 304 aaPredicted RBP10.22□□□□□ -0.77
SRSF1-204ENST00000581979 AP2S1P53680 142 aaPredicted RBP10.22□□□□□ -0.77
SRSF1-204ENST00000581979 BRWD1-AS2P59051 145 aa10.22□□□□□ -0.77
SRSF1-204ENST00000581979 LMO4P61968 165 aa10.22□□□□□ -0.77
SRSF1-204ENST00000581979 KRTAP24-1Q3LI83 254 aa10.22□□□□□ -0.77
SRSF1-204ENST00000581979 OR1S1Q8NH92 325 aa10.22□□□□□ -0.77
SRSF1-204ENST00000581979 ZNF596Q8TC21 504 aa10.22□□□□□ -0.77
SRSF1-204ENST00000581979 RNF126Q9BV68 326 aa10.22□□□□□ -0.77
SRSF1-204ENST00000581979 OR5AC2Q9NZP5 309 aa10.22□□□□□ -0.77
SRSF1-204ENST00000581979 TNFSF18Q9UNG2 199 aa10.22□□□□□ -0.77
SRSF1-204ENST00000581979 IGHV2-26A0A0B4J1V2 119 aa10.21□□□□□ -0.77
SRSF1-204ENST00000581979 A0A0G2JRQ6 117 aa10.21□□□□□ -0.77
SRSF1-204ENST00000581979 A0A1B0GU03 582 aa10.21□□□□□ -0.77
SRSF1-204ENST00000581979 FAM157AC9JC47 383 aa10.21□□□□□ -0.77
SRSF1-204ENST00000581979 K7EPK0 472 aa10.21□□□□□ -0.77
SRSF1-204ENST00000581979 ST8SIA3O43173 380 aa10.21□□□□□ -0.77
SRSF1-204ENST00000581979 HPRT1P00492 218 aa10.21□□□□□ -0.77
SRSF1-204ENST00000581979 KRASP01116 189 aa10.21□□□□□ -0.77
SRSF1-204ENST00000581979 IL3RAP26951 378 aa10.21□□□□□ -0.77
SRSF1-204ENST00000581979 G6PCP35575 357 aa10.21□□□□□ -0.77
SRSF1-204ENST00000581979 NUP62P37198 522 aaPredicted RBP10.21□□□□□ -0.77
SRSF1-204ENST00000581979 PRRX1P54821 245 aa10.21□□□□□ -0.77
SRSF1-204ENST00000581979 ARF6P62330 175 aa10.21□□□□□ -0.77
SRSF1-204ENST00000581979 ZNF833PQ6ZTB9 187 aa10.21□□□□□ -0.77
SRSF1-204ENST00000581979 FAM71E2Q8N5Q1 922 aa10.21□□□□□ -0.77
SRSF1-204ENST00000581979 INO80EQ8NBZ0 244 aaPredicted RBP10.21□□□□□ -0.77
SRSF1-204ENST00000581979 DDB2Q92466 427 aa10.21□□□□□ -0.77
SRSF1-204ENST00000581979 TNFRSF14Q92956 283 aa10.21□□□□□ -0.77
SRSF1-204ENST00000581979 TMEM186Q96B77 213 aa10.21□□□□□ -0.77
SRSF1-204ENST00000581979 CLEC7AQ9BXN2 247 aa10.21□□□□□ -0.77
SRSF1-204ENST00000581979 MMP24Q9Y5R2 645 aa10.21□□□□□ -0.77
SRSF1-204ENST00000581979 M0R1W7 72 aa10.21□□□□□ -0.78
SRSF1-204ENST00000581979 RBFOX2O43251 390 aaKnown RBP eCLIP10.21□□□□□ -0.784e-10■■■■□ 23
SRSF1-204ENST00000581979 ENSAO43768 121 aaKnown RBP10.21□□□□□ -0.78
SRSF1-204ENST00000581979 DEDDO75618 318 aa10.21□□□□□ -0.78
SRSF1-204ENST00000581979 MSMBP08118 114 aa10.21□□□□□ -0.78
SRSF1-204ENST00000581979 SLC25A6P12236 298 aa10.21□□□□□ -0.78
SRSF1-204ENST00000581979 LYL1P12980 280 aa10.21□□□□□ -0.78
SRSF1-204ENST00000581979 COX7A1P24310 79 aa10.21□□□□□ -0.78
SRSF1-204ENST00000581979 ZFP36P26651 326 aaKnown RBP10.21□□□□□ -0.78
SRSF1-204ENST00000581979 S100A11P31949 105 aa10.21□□□□□ -0.78
SRSF1-204ENST00000581979 NKX2-1P43699 371 aaPredicted RBP10.21□□□□□ -0.78
SRSF1-204ENST00000581979 DLX1P56177 255 aa10.21□□□□□ -0.78
SRSF1-204ENST00000581979 LCN2P80188 198 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms