RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 PRH1P02810 166 aa10.53□□□□□ -0.72
CDK5RAP3-217ENST00000580287 CD55P08174 381 aa10.53□□□□□ -0.72
CDK5RAP3-217ENST00000580287 ADH4P08319 380 aa10.53□□□□□ -0.72
CDK5RAP3-217ENST00000580287 IRF2P14316 349 aa10.53□□□□□ -0.72
CDK5RAP3-217ENST00000580287 UCP1P25874 307 aa10.53□□□□□ -0.72
CDK5RAP3-217ENST00000580287 HMGN3Q15651 99 aa10.53□□□□□ -0.72
CDK5RAP3-217ENST00000580287 RFESDQ8TAC1 157 aa10.53□□□□□ -0.72
CDK5RAP3-217ENST00000580287 KCNIP1Q9NZI2 227 aa10.53□□□□□ -0.72
CDK5RAP3-217ENST00000580287 FBN2P35556 2912 aa10.52□□□□□ -0.72
CDK5RAP3-217ENST00000580287 BORCS7-ASMTA0A0B4J1R7 106 aa10.52□□□□□ -0.73
CDK5RAP3-217ENST00000580287 H0Y980 276 aa10.52□□□□□ -0.73
CDK5RAP3-217ENST00000580287 FBP1P09467 338 aa10.52□□□□□ -0.73
CDK5RAP3-217ENST00000580287 VDAC1P21796 283 aa10.52□□□□□ -0.73
CDK5RAP3-217ENST00000580287 CDKN1AP38936 164 aa10.52□□□□□ -0.73
CDK5RAP3-217ENST00000580287 TMEM182Q6ZP80 229 aaPredicted RBP10.52□□□□□ -0.73
CDK5RAP3-217ENST00000580287 MRGPRDQ8TDS7 321 aa10.52□□□□□ -0.73
CDK5RAP3-217ENST00000580287 CABLES2Q9BTV7 478 aa10.52□□□□□ -0.73
CDK5RAP3-217ENST00000580287 TMEM106BQ9NUM4 274 aa10.52□□□□□ -0.73
CDK5RAP3-217ENST00000580287 RNF150Q9ULK6 438 aa10.52□□□□□ -0.73
CDK5RAP3-217ENST00000580287 POLQO75417 2590 aa10.52□□□□□ -0.73
CDK5RAP3-217ENST00000580287 CSMD1Q96PZ7 3565 aa10.52□□□□□ -0.73
CDK5RAP3-217ENST00000580287 TMEM178BH3BS89 294 aa10.52□□□□□ -0.73
CDK5RAP3-217ENST00000580287 GATCO43716 136 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP3-217ENST00000580287 TMEM50AO95807 157 aa10.52□□□□□ -0.73
CDK5RAP3-217ENST00000580287 IL2RGP31785 369 aa10.52□□□□□ -0.73
CDK5RAP3-217ENST00000580287 P2RY1P47900 373 aa10.52□□□□□ -0.73
CDK5RAP3-217ENST00000580287 TESK1Q15569 626 aa10.52□□□□□ -0.73
CDK5RAP3-217ENST00000580287 LYPD6BQ8NI32 183 aa10.52□□□□□ -0.73
CDK5RAP3-217ENST00000580287 Q8TCH9 128 aa10.52□□□□□ -0.73
CDK5RAP3-217ENST00000580287 TCTEX1D2Q8WW35 142 aa10.52□□□□□ -0.73
CDK5RAP3-217ENST00000580287 DIRC2Q96SL1 478 aa10.52□□□□□ -0.73
CDK5RAP3-217ENST00000580287 TUBA4BQ9H853 241 aa10.52□□□□□ -0.73
CDK5RAP3-217ENST00000580287 FBXO7Q9Y3I1 522 aa10.52□□□□□ -0.73
CDK5RAP3-217ENST00000580287 MED13LQ71F56 2210 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 IGHV1-69-2A0A0G2JMI3 117 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 TMEM30CPA0ZSE6 113 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 IGSF23A1L1A6 192 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 OOEPA6NGQ2 149 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 M0R036 132 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 TMPRSS2O15393 492 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 PPIHO43447 177 aaKnown RBP10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 DANCRP0C864 163 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 PPP1CCP36873 323 aaKnown RBP10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 EDDM3BP56851 147 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 LTC4SQ16873 150 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 GPR157Q5UAW9 335 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 LYPD2Q6UXB3 125 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 OR5D13Q8NGL4 314 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 OR1L1Q8NH94 360 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 FAM222BQ8WU58 562 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 HELZ2Q9BYK8 2649 aaKnown RBP10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 A6NNC1 897 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 AP4M1O00189 453 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 FCN3O75636 299 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 TSPAN15O95858 294 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 GAPDHP04406 335 aaKnown RBP10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 SSTR5P35346 364 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 OR2B8PP59922 312 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 RUNX1Q01196 453 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 EWSR1Q01844 656 aaKnown RBP eCLIP10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 STUMQ69YW2 141 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 FAM24BQ8N5W8 94 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 OR13A1Q8NGR1 328 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 SCRT1Q9BWW7 348 aa10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 EIF5A2Q9GZV4 153 aaKnown RBP10.51□□□□□ -0.73
CDK5RAP3-217ENST00000580287 A0A0G2JRQ6 117 aa10.5□□□□□ -0.73
CDK5RAP3-217ENST00000580287 LRRC30A6NM36 301 aa10.5□□□□□ -0.73
CDK5RAP3-217ENST00000580287 IGHV3-7P01780 117 aa10.5□□□□□ -0.73
CDK5RAP3-217ENST00000580287 COL8A1P27658 744 aa10.5□□□□□ -0.73
CDK5RAP3-217ENST00000580287 CAMLGP49069 296 aa10.5□□□□□ -0.73
CDK5RAP3-217ENST00000580287 ERVFRD-1P60508 538 aa10.5□□□□□ -0.73
CDK5RAP3-217ENST00000580287 CCL20P78556 96 aa10.5□□□□□ -0.73
CDK5RAP3-217ENST00000580287 UBAC2Q8NBM4 344 aa10.5□□□□□ -0.73
CDK5RAP3-217ENST00000580287 FAM213BQ8TBF2 198 aa10.5□□□□□ -0.73
CDK5RAP3-217ENST00000580287 GALMQ96C23 342 aa10.5□□□□□ -0.73
CDK5RAP3-217ENST00000580287 CBLN4Q9NTU7 201 aa10.5□□□□□ -0.73
CDK5RAP3-217ENST00000580287 IFNL4K9M1U5 179 aa10.5□□□□□ -0.73
CDK5RAP3-217ENST00000580287 ARG1P05089 322 aa10.5□□□□□ -0.73
CDK5RAP3-217ENST00000580287 RD3LP0DJH9 198 aa10.5□□□□□ -0.73
CDK5RAP3-217ENST00000580287 SNCAP37840 140 aa10.5□□□□□ -0.73
CDK5RAP3-217ENST00000580287 HNF4GQ14541 408 aa10.5□□□□□ -0.73
CDK5RAP3-217ENST00000580287 GUK1Q16774 197 aa10.5□□□□□ -0.73
CDK5RAP3-217ENST00000580287 NMSQ5H8A3 153 aa10.5□□□□□ -0.73
CDK5RAP3-217ENST00000580287 OR2B11Q5JQS5 317 aa10.5□□□□□ -0.73
CDK5RAP3-217ENST00000580287 C11orf71Q6IPW1 123 aa10.5□□□□□ -0.73
CDK5RAP3-217ENST00000580287 OR52L2PQ8NGH6 319 aa10.5□□□□□ -0.73
CDK5RAP3-217ENST00000580287 GAFA1Q96PS6 74 aa10.5□□□□□ -0.73
CDK5RAP3-217ENST00000580287 RARRES2Q99969 163 aa10.5□□□□□ -0.73
CDK5RAP3-217ENST00000580287 TMPRSS5Q9H3S3 457 aa10.5□□□□□ -0.73
CDK5RAP3-217ENST00000580287 PPIAL4EA0A075B759 164 aa10.49□□□□□ -0.73
CDK5RAP3-217ENST00000580287 C12orf77C9JDV5 145 aa10.49□□□□□ -0.73
CDK5RAP3-217ENST00000580287 PPIAL4DF5H284 164 aa10.49□□□□□ -0.73
CDK5RAP3-217ENST00000580287 K7N7A8 449 aa10.49□□□□□ -0.73
CDK5RAP3-217ENST00000580287 PPIAL4FP0DN26 164 aa10.49□□□□□ -0.73
CDK5RAP3-217ENST00000580287 CEBPGP53567 150 aa10.49□□□□□ -0.73
CDK5RAP3-217ENST00000580287 OXLD1Q5BKU9 147 aa10.49□□□□□ -0.73
CDK5RAP3-217ENST00000580287 UTF1Q5T230 341 aa10.49□□□□□ -0.73
CDK5RAP3-217ENST00000580287 MALSU1Q96EH3 234 aa10.49□□□□□ -0.73
CDK5RAP3-217ENST00000580287 FAM212BQ9NTI7 297 aaPredicted RBP10.49□□□□□ -0.73
CDK5RAP3-217ENST00000580287 MBNL3Q9NUK0 354 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms