RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 TMEM160Q9NX00 188 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 KCNS2Q9ULS6 477 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 ACANP16112 2415 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 DOCK11Q5JSL3 2073 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 HIVEP1P15822 2718 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 TRAV6A0A075B6T7 132 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 PIGBOS1A0A0B4J2F0 54 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 RNF212BA8MTL3 300 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 SNRPGP15A8MWD9 76 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 NPFFO15130 113 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 RBFOX2O43251 390 aaKnown RBP eCLIP6.47□□□□□ -1.37
COPS3-215ENST00000578317 OR4E1P0C645 316 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 CT45A6P0DMU7 189 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 CT45A5P0DMU8 189 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 CT45A7P0DMV0 189 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 ANXA7P20073 488 aaKnown RBP6.47□□□□□ -1.37
COPS3-215ENST00000578317 THBS3P49746 956 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 RPS16P62249 146 aaKnown RBP6.47□□□□□ -1.37
COPS3-215ENST00000578317 SUPT4H1P63272 117 aaKnown RBP6.47□□□□□ -1.37
COPS3-215ENST00000578317 KLRD1Q13241 179 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 HABP2Q14520 560 aaPredicted RBP6.47□□□□□ -1.37
COPS3-215ENST00000578317 PHLDA2Q53GA4 152 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 RPL39P5Q59GN2 51 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 LDLRAD2Q5SZI1 272 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 CCDC144NLQ6NUI1 221 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 GLDNQ6ZMI3 551 aaPredicted RBP6.47□□□□□ -1.37
COPS3-215ENST00000578317 Q6ZNX1 250 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 C9orf139Q6ZV77 190 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 TMED4Q7Z7H5 227 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 SGPP2Q8IWX5 399 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 OR8H3Q8N146 312 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 ADAD2Q8NCV1 583 aaKnown RBP6.47□□□□□ -1.37
COPS3-215ENST00000578317 CD300LFQ8TDQ1 290 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 C5orf30Q96GV9 206 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 MEGF9Q9H1U4 602 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 NAA60Q9H7X0 242 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 ZNRD1Q9P1U0 126 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 ABCA1O95477 2261 aa6.46□□□□□ -1.37
COPS3-215ENST00000578317 DSCAML1Q8TD84 2053 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 ABCA2Q9BZC7 2435 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 A0A0B4J2A0 478 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 TEX13DA0A0J9YY54 714 aaPredicted RBP6.46□□□□□ -1.38
COPS3-215ENST00000578317 C3orf85A0A1B0GTC6 90 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 C7orf66A4D0T2 115 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 H0Y980 276 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 M0R1X1 148 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 DUS4LO95620 317 aaKnown RBP6.46□□□□□ -1.38
COPS3-215ENST00000578317 PLA2G1BP04054 148 aaKnown RBP6.46□□□□□ -1.38
COPS3-215ENST00000578317 IGHV4-38-2P0DP08 117 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 AKR1C4P17516 323 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 MC5RP33032 325 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 SAA4P35542 130 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 BRWD1-AS2P59051 145 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 RPL30P62888 115 aaKnown RBP6.46□□□□□ -1.38
COPS3-215ENST00000578317 PRB3Q04118 309 aaPredicted RBP6.46□□□□□ -1.38
COPS3-215ENST00000578317 CATR1Q13166 79 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 DHRS2Q13268 280 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 GAGE13Q4V321 117 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 TPTE2P1Q5T6R2 138 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 TBC1D26Q86UD7 250 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 TGIF2LXQ8IUE1 241 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 GLYATL2Q8WU03 294 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 MITD1Q8WV92 249 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 DDB2Q92466 427 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 RPEQ96AT9 228 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 NABP2Q9BQ15 211 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 SHPKQ9UHJ6 478 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 NUP50Q9UKX7 468 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 PRELID3BQ9Y3B1 194 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 MXRA5Q9NR99 2828 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 ARHGAP32A7KAX9 2087 aa6.46□□□□□ -1.38
COPS3-215ENST00000578317 TLN2Q9Y4G6 2542 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 WNK2Q9Y3S1 2297 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 C9orf170A2RU37 121 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 LINC00473A8K010 186 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 A8MV72 311 aaPredicted RBP6.45□□□□□ -1.38
COPS3-215ENST00000578317 SFT2D2O95562 160 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 CDS2O95674 445 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 IFNA2P01563 188 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 RRASP10301 218 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 ANXA3P12429 323 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 CD99P14209 185 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 RPA2P15927 270 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 UCP1P25874 307 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 KIR2DS2P43631 304 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 DYNLT3P51808 116 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 PPP1R1AQ13522 171 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 AANATQ16613 207 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 MLANAQ16655 118 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 TATDN3Q17R31 274 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 ZNF585BQ52M93 769 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 LYG2Q86SG7 212 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 CADM3Q8N126 398 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 LRTM2Q8N967 370 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 ZNF383Q8NA42 475 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 ZNF431Q8TF32 576 aaPredicted RBP6.45□□□□□ -1.38
COPS3-215ENST00000578317 CAPSLQ8WWF8 208 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 TMEM56Q96MV1 263 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 RNF5Q99942 180 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 PRDM13Q9H4Q3 707 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms